RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 DPY19L2Q6NUT2 758 aa15.95■□□□□ 0.14
VEGFA-224ENST00000523873 SSH3Q8TE77 659 aa15.95■□□□□ 0.14
VEGFA-224ENST00000523873 RRAGCQ9HB90 399 aa15.95■□□□□ 0.14
VEGFA-224ENST00000523873 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.95■□□□□ 0.14
VEGFA-224ENST00000523873 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
VEGFA-224ENST00000523873 PDE8BO95263 885 aa15.94■□□□□ 0.14
VEGFA-224ENST00000523873 GYG1P46976 350 aa15.93■□□□□ 0.14
VEGFA-224ENST00000523873 CIAPIN1Q6FI81 312 aa15.93■□□□□ 0.14
VEGFA-224ENST00000523873 SIRT2Q8IXJ6 389 aa15.93■□□□□ 0.14
VEGFA-224ENST00000523873 POTECB2RU33 542 aa15.92■□□□□ 0.14
VEGFA-224ENST00000523873 PSMD14O00487 310 aa15.92■□□□□ 0.14
VEGFA-224ENST00000523873 IL15P40933 162 aaPredicted RBP15.92■□□□□ 0.14
VEGFA-224ENST00000523873 TFCP2Q12800 502 aa15.92■□□□□ 0.14
VEGFA-224ENST00000523873 UBE4AQ14139 1066 aa15.92■□□□□ 0.14
VEGFA-224ENST00000523873 FBXO3Q9UK99 471 aa15.92■□□□□ 0.14
VEGFA-224ENST00000523873 SURF6O75683 361 aaKnown RBP15.91■□□□□ 0.14
VEGFA-224ENST00000523873 FGFR2P21802 821 aa15.91■□□□□ 0.14
VEGFA-224ENST00000523873 IRX6P78412 446 aaPredicted RBP15.91■□□□□ 0.14
VEGFA-224ENST00000523873 G3BP1Q13283 466 aaKnown RBP eCLIP15.91■□□□□ 0.14
VEGFA-224ENST00000523873 PUM3Q15397 648 aaKnown RBP15.91■□□□□ 0.14
VEGFA-224ENST00000523873 C15orf52Q6ZUT6 534 aaKnown RBP15.91■□□□□ 0.14
VEGFA-224ENST00000523873 GPC2Q8N158 579 aa15.91■□□□□ 0.14
VEGFA-224ENST00000523873 FBXW7Q969H0 707 aa15.91■□□□□ 0.14
VEGFA-224ENST00000523873 COA1Q9GZY4 146 aa15.91■□□□□ 0.14
VEGFA-224ENST00000523873 CHMP4BQ9H444 224 aaKnown RBP15.91■□□□□ 0.14
VEGFA-224ENST00000523873 CEP126Q9P2H0 1117 aa15.91■□□□□ 0.14
VEGFA-224ENST00000523873 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
VEGFA-224ENST00000523873 POLR2AP24928 1970 aaKnown RBP15.91■□□□□ 0.14
VEGFA-224ENST00000523873 SHTN1A0MZ66 631 aa15.9■□□□□ 0.14
VEGFA-224ENST00000523873 KIF3CO14782 793 aa15.9■□□□□ 0.14
VEGFA-224ENST00000523873 SASH1O94885 1247 aa15.9■□□□□ 0.14
VEGFA-224ENST00000523873 OS9Q13438 667 aaPredicted RBP15.9■□□□□ 0.14
VEGFA-224ENST00000523873 ATP2B3Q16720 1220 aa15.9■□□□□ 0.14
VEGFA-224ENST00000523873 FAM84BQ96KN1 310 aaPredicted RBP15.9■□□□□ 0.14
VEGFA-224ENST00000523873 MXD3Q9BW11 206 aa15.9■□□□□ 0.14
VEGFA-224ENST00000523873 CD209Q9NNX6 404 aa15.9■□□□□ 0.14
VEGFA-224ENST00000523873 JAG2Q9Y219 1238 aa15.9■□□□□ 0.14
VEGFA-224ENST00000523873 EXOC6BQ9Y2D4 811 aa15.9■□□□□ 0.14
VEGFA-224ENST00000523873 ADORA1P30542 326 aa15.89■□□□□ 0.13
VEGFA-224ENST00000523873 GMPSP49915 693 aaPredicted RBP15.89■□□□□ 0.13
VEGFA-224ENST00000523873 SCNN1DP51172 638 aa15.89■□□□□ 0.13
VEGFA-224ENST00000523873 TNIP1Q15025 636 aa15.89■□□□□ 0.13
VEGFA-224ENST00000523873 ZNF804AQ7Z570 1209 aa15.89■□□□□ 0.13
VEGFA-224ENST00000523873 RPAP2Q8IXW5 612 aaPredicted RBP15.89■□□□□ 0.13
VEGFA-224ENST00000523873 IQSEC3Q9UPP2 1182 aaPredicted RBP15.89■□□□□ 0.13
VEGFA-224ENST00000523873 ADAMTSL1Q8N6G6 1762 aa15.88■□□□□ 0.13
VEGFA-224ENST00000523873 ZNF609O15014 1411 aa15.88■□□□□ 0.13
VEGFA-224ENST00000523873 IFIT1P09914 478 aaKnown RBP15.88■□□□□ 0.13
VEGFA-224ENST00000523873 SLC5A1P13866 664 aa15.88■□□□□ 0.13
VEGFA-224ENST00000523873 HIBADHP31937 336 aaKnown RBP15.88■□□□□ 0.13
VEGFA-224ENST00000523873 BCAMP50895 628 aa15.88■□□□□ 0.13
VEGFA-224ENST00000523873 PODNQ7Z5L7 613 aa15.88■□□□□ 0.13
VEGFA-224ENST00000523873 EXOC6Q8TAG9 804 aa15.88■□□□□ 0.13
VEGFA-224ENST00000523873 L3MBTL3Q96JM7 780 aaPredicted RBP15.88■□□□□ 0.13
VEGFA-224ENST00000523873 NOP58Q9Y2X3 529 aaKnown RBP15.88■□□□□ 0.13
VEGFA-224ENST00000523873 PCDHB15Q9Y5E8 787 aa15.88■□□□□ 0.13
VEGFA-224ENST00000523873 MYO5AQ9Y4I1 1855 aaKnown RBP15.88■□□□□ 0.13
VEGFA-224ENST00000523873 USP17L3A6NCW0 530 aa15.87■□□□□ 0.13
VEGFA-224ENST00000523873 USP17L4A6NCW7 530 aa15.87■□□□□ 0.13
VEGFA-224ENST00000523873 APBB1O00213 710 aa15.87■□□□□ 0.13
VEGFA-224ENST00000523873 EPS15P42566 896 aa15.87■□□□□ 0.13
VEGFA-224ENST00000523873 TIMM10P62072 90 aa15.87■□□□□ 0.13
VEGFA-224ENST00000523873 GTF2IP78347 998 aa15.87■□□□□ 0.13
VEGFA-224ENST00000523873 USP17L1Q7RTZ2 530 aa15.87■□□□□ 0.13
VEGFA-224ENST00000523873 FBXO33Q7Z6M2 555 aa15.87■□□□□ 0.13
VEGFA-224ENST00000523873 LPIN2Q92539 896 aa15.87■□□□□ 0.13
VEGFA-224ENST00000523873 A0A1B0GUL7 405 aa15.86■□□□□ 0.13
VEGFA-224ENST00000523873 VIL1P09327 827 aaKnown RBP15.86■□□□□ 0.13
VEGFA-224ENST00000523873 IL1R1P14778 569 aa15.86■□□□□ 0.13
VEGFA-224ENST00000523873 VEGFAP15692 232 aaPredicted RBP15.86■□□□□ 0.13
VEGFA-224ENST00000523873 HACL1Q9UJ83 578 aa15.86■□□□□ 0.13
VEGFA-224ENST00000523873 AKAP11Q9UKA4 1901 aa15.86■□□□□ 0.13
VEGFA-224ENST00000523873 HMMRO75330 724 aa15.85■□□□□ 0.13
VEGFA-224ENST00000523873 POTEIP0CG38 1075 aa15.85■□□□□ 0.13
VEGFA-224ENST00000523873 POTEJP0CG39 1038 aa15.85■□□□□ 0.13
VEGFA-224ENST00000523873 LMOD1P29536 600 aaPredicted RBP15.85■□□□□ 0.13
VEGFA-224ENST00000523873 EPHX2P34913 555 aa15.85■□□□□ 0.13
VEGFA-224ENST00000523873 CAVIN4Q5BKX8 364 aa15.85■□□□□ 0.13
VEGFA-224ENST00000523873 DACT2Q5SW24 774 aa15.85■□□□□ 0.13
VEGFA-224ENST00000523873 TTLL5Q6EMB2 1281 aa15.85■□□□□ 0.13
VEGFA-224ENST00000523873 RSBN1LQ6PCB5 846 aaPredicted RBP15.85■□□□□ 0.13
VEGFA-224ENST00000523873 VPS37DQ86XT2 251 aa15.85■□□□□ 0.13
VEGFA-224ENST00000523873 TDRD7Q8NHU6 1098 aaKnown RBP15.85■□□□□ 0.13
VEGFA-224ENST00000523873 NEUROD6Q96NK8 337 aa15.85■□□□□ 0.13
VEGFA-224ENST00000523873 BCL11AQ9H165 835 aa15.85■□□□□ 0.13
VEGFA-224ENST00000523873 TAF1DQ9H5J8 278 aaPredicted RBP15.85■□□□□ 0.13
VEGFA-224ENST00000523873 GPRC5DQ9NZD1 345 aa15.85■□□□□ 0.13
VEGFA-224ENST00000523873 COL1A1P02452 1464 aaPredicted RBP15.84■□□□□ 0.13
VEGFA-224ENST00000523873 PHKA1P46020 1223 aa15.84■□□□□ 0.13
VEGFA-224ENST00000523873 CHAF1AQ13111 956 aaPredicted RBP15.84■□□□□ 0.13
VEGFA-224ENST00000523873 EAPPQ56P03 285 aaPredicted RBP15.84■□□□□ 0.13
VEGFA-224ENST00000523873 TNNI3KQ59H18 835 aa15.84■□□□□ 0.13
VEGFA-224ENST00000523873 STRIP1Q5VSL9 837 aa15.84■□□□□ 0.13
VEGFA-224ENST00000523873 MICALL2Q8IY33 904 aa15.84■□□□□ 0.13
VEGFA-224ENST00000523873 XAGE2Q96GT9 111 aa15.84■□□□□ 0.13
VEGFA-224ENST00000523873 CNOT7Q9UIV1 285 aaKnown RBP15.84■□□□□ 0.13
VEGFA-224ENST00000523873 AKAP2Q9Y2D5 859 aa15.84■□□□□ 0.13
VEGFA-224ENST00000523873 FPGT-TNNI3KV9GXZ4 949 aa15.84■□□□□ 0.13
VEGFA-224ENST00000523873 ECM29Q5VYK3 1845 aa15.84■□□□□ 0.13
VEGFA-224ENST00000523873 IQCA1LA6NCM1 817 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms