RNA–Protein interactions for RNA: ENST00000523856.5

FCHSD1-210, Transcript of FCH and double SH3 domains 1, human

TSL 2

Gene FCHSD1, Length 3,932 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FCHSD1-210	ENST00000523856	NUP133	Q8WUM0	1156 aa		13.86	□□□□□ -0.19
FCHSD1-210	ENST00000523856	LEO1	Q8WVC0	666 aa	Predicted RBP	13.86	□□□□□ -0.19
FCHSD1-210	ENST00000523856	DBNDD2	Q9BQY9	259 aa		13.86	□□□□□ -0.19
FCHSD1-210	ENST00000523856	CLSTN2	Q9H4D0	955 aa		13.86	□□□□□ -0.19
FCHSD1-210	ENST00000523856	IGSF1	Q8N6C5	1336 aa		13.86	□□□□□ -0.19
FCHSD1-210	ENST00000523856	FILIP1L	Q4L180	1135 aa		13.86	□□□□□ -0.19
FCHSD1-210	ENST00000523856		A0A087WWV3	80 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	SGSM2	O43147	1006 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	VPS53	Q5VIR6	699 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	UTP14A	Q9BVJ6	771 aa	Known RBP	13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	PTPRM	P28827	1452 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	KIF5C	O60282	957 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	KIAA0754	O94854	1291 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	RUFY3	Q7L099	469 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	EVI5L	Q96CN4	794 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	DDX41	Q9UJV9	622 aa	Known RBP	13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	EPB41L2	O43491	1005 aa	Known RBP	13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	DHX16	O60231	1041 aa	Known RBP	13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	NR1I2	O75469	434 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	IL2RB	P14784	551 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	KARS	Q15046	597 aa	Known RBP	13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	FBXO38	Q6PIJ6	1188 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	C8orf37	Q96NL8	207 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	CRACR2A	Q9BSW2	395 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	CTNNA3	Q9UI47	895 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	MRVI1	Q9Y6F6	885 aa		13.85	□□□□□ -0.19
FCHSD1-210	ENST00000523856	OAS2	P29728	719 aa	Known RBP	13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	MNAT1	P51948	309 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	CREB3L3	Q68CJ9	461 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	ARHGEF25	Q86VW2	580 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	DNAJC10	Q8IXB1	793 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	RASEF	Q8IZ41	740 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	SMARCE1	Q969G3	411 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	NEK1	Q96PY6	1258 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	MINDY4B	A8MYZ0	360 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	ARID5B	Q14865	1188 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	ZSCAN26	Q16670	478 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	KLHL34	Q8N239	644 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	C8orf76	Q96K31	380 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	SPTLC3	Q9NUV7	552 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	SLAIN2	Q9P270	581 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	LRP2BP	Q9P2M1	347 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	PUF60	Q9UHX1	559 aa	Known RBP	13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	NAP1L1	P55209	391 aa	Known RBP	13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	CPS1	P31327	1500 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	LRRC8A	Q8IWT6	810 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	SMARCC1	Q92922	1105 aa	Predicted RBP	13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	SLC52A2	Q9HAB3	445 aa		13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	TLR7	Q9NYK1	1049 aa	Known RBP	13.84	□□□□□ -0.19
FCHSD1-210	ENST00000523856	NCOA3	Q9Y6Q9	1424 aa		13.83	□□□□□ -0.19
FCHSD1-210	ENST00000523856	MROH2A	A6NES4	1674 aa		13.83	□□□□□ -0.19
FCHSD1-210	ENST00000523856	NEXMIF	Q5QGS0	1516 aa		13.83	□□□□□ -0.2
FCHSD1-210	ENST00000523856	KIAA0232	Q92628	1395 aa		13.83	□□□□□ -0.2
FCHSD1-210	ENST00000523856	SEC62	Q99442	399 aa	Known RBP	13.83	□□□□□ -0.2
FCHSD1-210	ENST00000523856	RAI14	Q9P0K7	980 aa		13.83	□□□□□ -0.2
FCHSD1-210	ENST00000523856		A0A1B0GVL5	298 aa		13.83	□□□□□ -0.2
FCHSD1-210	ENST00000523856	HNRNPH2	P55795	449 aa	Known RBP	13.83	□□□□□ -0.2
FCHSD1-210	ENST00000523856	ME3	Q16798	604 aa		13.83	□□□□□ -0.2
FCHSD1-210	ENST00000523856	TTC31	Q49AM3	519 aa	Predicted RBP	13.83	□□□□□ -0.2
FCHSD1-210	ENST00000523856	MRPS27	Q92552	414 aa	Known RBP	13.83	□□□□□ -0.2
FCHSD1-210	ENST00000523856	SIRT1	Q96EB6	747 aa		13.83	□□□□□ -0.2
FCHSD1-210	ENST00000523856	DCAF5	Q96JK2	942 aa		13.83	□□□□□ -0.2
FCHSD1-210	ENST00000523856	GBP3	Q9H0R5	595 aa		13.83	□□□□□ -0.2
FCHSD1-210	ENST00000523856	ATP7B	P35670	1465 aa		13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	PTCH1	Q13635	1447 aa		13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	USP8	P40818	1118 aa		13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	ST7	Q9NRC1	585 aa		13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	LRRC7	Q96NW7	1537 aa		13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	CAMSAP1	Q5T5Y3	1602 aa		13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	RXRA	P19793	462 aa		13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	SLFNL1	Q499Z3	407 aa		13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	EAF2	Q96CJ1	260 aa	Predicted RBP	13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	DRC1	Q96MC2	740 aa		13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	CLTC	Q00610	1675 aa	Known RBP	13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	AATK	Q6ZMQ8	1374 aa		13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856		Q6ZUG5	572 aa		13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	MICALL1	Q8N3F8	863 aa		13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	SRRT	Q9BXP5	876 aa	Known RBP	13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	KCNF1	Q9H3M0	494 aa		13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
FCHSD1-210	ENST00000523856	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.81	□□□□□ -0.2
FCHSD1-210	ENST00000523856	JAK2	O60674	1132 aa		13.81	□□□□□ -0.2
FCHSD1-210	ENST00000523856	TDO2	P48775	406 aa		13.81	□□□□□ -0.2
FCHSD1-210	ENST00000523856	IVL	P07476	585 aa		13.81	□□□□□ -0.2
FCHSD1-210	ENST00000523856	RHOXF2B	P0C7M4	288 aa		13.81	□□□□□ -0.2
FCHSD1-210	ENST00000523856	IRX5	P78411	483 aa	Predicted RBP	13.81	□□□□□ -0.2
FCHSD1-210	ENST00000523856	RHOXF2	Q9BQY4	288 aa		13.81	□□□□□ -0.2
FCHSD1-210	ENST00000523856	RGS12	O14924	1447 aa		13.81	□□□□□ -0.2
FCHSD1-210	ENST00000523856	ARHGEF40	Q8TER5	1519 aa		13.81	□□□□□ -0.2
FCHSD1-210	ENST00000523856	KMT5B	Q4FZB7	885 aa		13.81	□□□□□ -0.2
FCHSD1-210	ENST00000523856	BEND3	Q5T5X7	828 aa		13.81	□□□□□ -0.2
FCHSD1-210	ENST00000523856	PHKG2	P15735	406 aa		13.8	□□□□□ -0.2
FCHSD1-210	ENST00000523856	MARCKS	P29966	332 aa	Predicted RBP	13.8	□□□□□ -0.2
FCHSD1-210	ENST00000523856	ATP6V1A	P38606	617 aa		13.8	□□□□□ -0.2
FCHSD1-210	ENST00000523856	SMC1A	Q14683	1233 aa	Known RBP	13.8	□□□□□ -0.2
FCHSD1-210	ENST00000523856	LZTFL1	Q9NQ48	299 aa		13.8	□□□□□ -0.2
FCHSD1-210	ENST00000523856	ARHGEF10	O15013	1369 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms