RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
NSMCE2-213ENST00000523824 CCDC191Q8NCU4 936 aa10.28□□□□□ -0.76
NSMCE2-213ENST00000523824 JARID2Q92833 1246 aaPredicted RBP10.28□□□□□ -0.76
NSMCE2-213ENST00000523824 FBXW7Q969H0 707 aa10.28□□□□□ -0.76
NSMCE2-213ENST00000523824 RUNDC1Q96C34 613 aa10.28□□□□□ -0.76
NSMCE2-213ENST00000523824 TRIM35Q9UPQ4 493 aa10.28□□□□□ -0.76
NSMCE2-213ENST00000523824 ZNF609O15014 1411 aa10.27□□□□□ -0.77
NSMCE2-213ENST00000523824 FKTNO75072 461 aa10.27□□□□□ -0.77
NSMCE2-213ENST00000523824 PCCAP05165 728 aaPredicted RBP10.27□□□□□ -0.77
NSMCE2-213ENST00000523824 SREBF2Q12772 1141 aa10.27□□□□□ -0.77
NSMCE2-213ENST00000523824 FBXO46Q6PJ61 603 aaPredicted RBP10.27□□□□□ -0.77
NSMCE2-213ENST00000523824 PHAXQ9H814 394 aaKnown RBP10.27□□□□□ -0.77
NSMCE2-213ENST00000523824 CWC25Q9NXE8 425 aaPredicted RBP10.27□□□□□ -0.77
NSMCE2-213ENST00000523824 PAPPA2Q9BXP8 1791 aa10.26□□□□□ -0.77
NSMCE2-213ENST00000523824 PRKG1Q13976 671 aa10.26□□□□□ -0.77
NSMCE2-213ENST00000523824 WDR43Q15061 677 aaKnown RBP eCLIP10.26□□□□□ -0.77
NSMCE2-213ENST00000523824 NOM1Q5C9Z4 860 aaKnown RBP10.26□□□□□ -0.77
NSMCE2-213ENST00000523824 ARMC9Q7Z3E5 817 aa10.26□□□□□ -0.77
NSMCE2-213ENST00000523824 CDC5LQ99459 802 aaKnown RBP10.26□□□□□ -0.77
NSMCE2-213ENST00000523824 MXD3Q9BW11 206 aa10.26□□□□□ -0.77
NSMCE2-213ENST00000523824 SCN9AQ15858 1988 aa10.26□□□□□ -0.77
NSMCE2-213ENST00000523824 WTIPA6NIX2 430 aaPredicted RBP10.25□□□□□ -0.77
NSMCE2-213ENST00000523824 ELL2O00472 640 aaPredicted RBP10.25□□□□□ -0.77
NSMCE2-213ENST00000523824 WNT10BO00744 389 aa10.25□□□□□ -0.77
NSMCE2-213ENST00000523824 DDX58O95786 925 aaKnown RBP10.25□□□□□ -0.77
NSMCE2-213ENST00000523824 PTPN12Q05209 780 aaKnown RBP10.25□□□□□ -0.77
NSMCE2-213ENST00000523824 DACT2Q5SW24 774 aa10.25□□□□□ -0.77
NSMCE2-213ENST00000523824 GCC1Q96CN9 775 aa10.25□□□□□ -0.77
NSMCE2-213ENST00000523824 MBIPQ9NS73 344 aa10.25□□□□□ -0.77
NSMCE2-213ENST00000523824 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.25□□□□□ -0.77
NSMCE2-213ENST00000523824 MYO3BQ8WXR4 1341 aa10.25□□□□□ -0.77
NSMCE2-213ENST00000523824 SASH1O94885 1247 aa10.24□□□□□ -0.77
NSMCE2-213ENST00000523824 ALDH1A1P00352 501 aa10.24□□□□□ -0.77
NSMCE2-213ENST00000523824 MMP14P50281 582 aa10.24□□□□□ -0.77
NSMCE2-213ENST00000523824 STRIP1Q5VSL9 837 aa10.24□□□□□ -0.77
NSMCE2-213ENST00000523824 METTL22Q9BUU2 404 aaPredicted RBP10.24□□□□□ -0.77
NSMCE2-213ENST00000523824 CFHR5Q9BXR6 569 aa10.24□□□□□ -0.77
NSMCE2-213ENST00000523824 COA1Q9GZY4 146 aa10.24□□□□□ -0.77
NSMCE2-213ENST00000523824 R3HDMLQ9H3Y0 253 aa10.24□□□□□ -0.77
NSMCE2-213ENST00000523824 BSDC1Q9NW68 430 aaPredicted RBP10.24□□□□□ -0.77
NSMCE2-213ENST00000523824 MINPP1Q9UNW1 487 aa10.24□□□□□ -0.77
NSMCE2-213ENST00000523824 MED23Q9ULK4 1368 aa10.24□□□□□ -0.77
NSMCE2-213ENST00000523824 ABCB7O75027 752 aa10.23□□□□□ -0.77
NSMCE2-213ENST00000523824 CCT4P50991 539 aaKnown RBP10.23□□□□□ -0.77
NSMCE2-213ENST00000523824 CTSWP56202 376 aa10.23□□□□□ -0.77
NSMCE2-213ENST00000523824 INHBEP58166 350 aa10.23□□□□□ -0.77
NSMCE2-213ENST00000523824 SPRYD7Q5W111 196 aa10.23□□□□□ -0.77
NSMCE2-213ENST00000523824 TTLL5Q6EMB2 1281 aa10.23□□□□□ -0.77
NSMCE2-213ENST00000523824 APOBEC3FQ8IUX4 373 aaKnown RBP10.23□□□□□ -0.77
NSMCE2-213ENST00000523824 SLC10A4Q96EP9 437 aa10.23□□□□□ -0.77
NSMCE2-213ENST00000523824 CHMP4AQ9BY43 222 aa10.23□□□□□ -0.77
NSMCE2-213ENST00000523824 ANGEL1Q9UNK9 670 aaKnown RBP10.23□□□□□ -0.77
NSMCE2-213ENST00000523824 ADAMTS8Q9UP79 889 aa10.23□□□□□ -0.77
NSMCE2-213ENST00000523824 MANSC4A6NHS7 340 aaPredicted RBP10.22□□□□□ -0.77
NSMCE2-213ENST00000523824 ZNF853P0CG23 659 aa10.22□□□□□ -0.77
NSMCE2-213ENST00000523824 GNAI1P63096 354 aa10.22□□□□□ -0.77
NSMCE2-213ENST00000523824 LDLRAD1Q5T700 205 aa10.22□□□□□ -0.77
NSMCE2-213ENST00000523824 CCDC30Q5VVM6 783 aa10.22□□□□□ -0.77
NSMCE2-213ENST00000523824 INTS3Q68E01 1043 aaKnown RBP10.22□□□□□ -0.77
NSMCE2-213ENST00000523824 KIAA0825Q8IV33 1275 aa10.22□□□□□ -0.77
NSMCE2-213ENST00000523824 TTLL11Q8NHH1 800 aa10.22□□□□□ -0.77
NSMCE2-213ENST00000523824 GREM2Q9H772 168 aa10.22□□□□□ -0.77
NSMCE2-213ENST00000523824 MAP3K2Q9Y2U5 619 aa10.22□□□□□ -0.77
NSMCE2-213ENST00000523824 LEMD3Q9Y2U8 911 aa10.22□□□□□ -0.77
NSMCE2-213ENST00000523824 TRIM17Q9Y577 477 aa10.22□□□□□ -0.77
NSMCE2-213ENST00000523824 MYBBP1AQ9BQG0 1328 aaKnown RBP10.22□□□□□ -0.77
NSMCE2-213ENST00000523824 IGHMBP2P38935 993 aaKnown RBP10.21□□□□□ -0.77
NSMCE2-213ENST00000523824 CALD1Q05682 793 aaKnown RBP10.21□□□□□ -0.77
NSMCE2-213ENST00000523824 NEXNQ0ZGT2 675 aa10.21□□□□□ -0.77
NSMCE2-213ENST00000523824 ANKRD2Q9GZV1 360 aa10.21□□□□□ -0.77
NSMCE2-213ENST00000523824 IFT57Q9NWB7 429 aa10.21□□□□□ -0.77
NSMCE2-213ENST00000523824 FZD1Q9UP38 647 aa10.21□□□□□ -0.77
NSMCE2-213ENST00000523824 ZNF804BA4D1E1 1349 aa10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 PI4KAP2A4QPH2 592 aa10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 PPP1R12BO60237 982 aaPredicted RBP10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 KCNJ4P48050 445 aa10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 GTF2IP78347 998 aa10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 DLGAP5Q15398 846 aa10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 HABP4Q5JVS0 413 aaKnown RBP10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 KSR2Q6VAB6 950 aa10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 OTOP1Q7RTM1 612 aa10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 TXNRD3Q86VQ6 643 aa10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 IFNL1Q8IU54 200 aa10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 PI4KAP1Q8N8J0 262 aa10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 C8orf58Q8NAV2 365 aa10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 DEFB129Q9H1M3 183 aa10.2□□□□□ -0.78
NSMCE2-213ENST00000523824 PSME4Q14997 1843 aa10.19□□□□□ -0.78
NSMCE2-213ENST00000523824 POTEFA5A3E0 1075 aa10.19□□□□□ -0.78
NSMCE2-213ENST00000523824 IGKV5-2P06315 115 aa10.19□□□□□ -0.78
NSMCE2-213ENST00000523824 ZBTB48P10074 688 aaPredicted RBP10.19□□□□□ -0.78
NSMCE2-213ENST00000523824 SUPT20HL1Q3ZLR7 823 aa10.19□□□□□ -0.78
NSMCE2-213ENST00000523824 OTUD7BQ6GQQ9 843 aa10.19□□□□□ -0.78
NSMCE2-213ENST00000523824 ERO1AQ96HE7 468 aa10.19□□□□□ -0.78
NSMCE2-213ENST00000523824 ZBED3Q96IU2 234 aaPredicted RBP10.19□□□□□ -0.78
NSMCE2-213ENST00000523824 MPHOSPH8Q99549 860 aa10.19□□□□□ -0.78
NSMCE2-213ENST00000523824 APAF1O14727 1248 aa10.18□□□□□ -0.78
NSMCE2-213ENST00000523824 MYO1BO43795 1136 aa10.18□□□□□ -0.78
NSMCE2-213ENST00000523824 ITGA6P23229 1130 aa10.18□□□□□ -0.78
NSMCE2-213ENST00000523824 KLRK1P26718 216 aa10.18□□□□□ -0.78
NSMCE2-213ENST00000523824 MAP3K11Q16584 847 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms