RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-213ENST00000523655 EPHA1P21709 976 aa8.4□□□□□ -1.06
SREK1-213ENST00000523655 CES1P23141 567 aa8.4□□□□□ -1.06
SREK1-213ENST00000523655 SERPINB4P48594 390 aa8.4□□□□□ -1.06
SREK1-213ENST00000523655 Q8N3U1 123 aa8.4□□□□□ -1.06
SREK1-213ENST00000523655 NFKBIEO00221 500 aa8.39□□□□□ -1.07
SREK1-213ENST00000523655 EREGO14944 169 aa8.39□□□□□ -1.07
SREK1-213ENST00000523655 SMNDC1O75940 238 aaKnown RBP eCLIP8.39□□□□□ -1.072e-7■□□□□ 8.7
SREK1-213ENST00000523655 CDC27P30260 824 aa8.39□□□□□ -1.07
SREK1-213ENST00000523655 TM4SF5O14894 197 aa8.38□□□□□ -1.07
SREK1-213ENST00000523655 NPR3P17342 541 aa8.38□□□□□ -1.07
SREK1-213ENST00000523655 FKBP4Q02790 459 aaKnown RBP eCLIP8.38□□□□□ -1.07
SREK1-213ENST00000523655 ZMYM1Q5SVZ6 1142 aa8.38□□□□□ -1.07
SREK1-213ENST00000523655 HGSNATQ68CP4 663 aa8.38□□□□□ -1.07
SREK1-213ENST00000523655 XKR5Q6UX68 686 aa8.38□□□□□ -1.07
SREK1-213ENST00000523655 F8W735 103 aaPredicted RBP8.37□□□□□ -1.07
SREK1-213ENST00000523655 PCSK2P16519 638 aa8.37□□□□□ -1.07
SREK1-213ENST00000523655 AKTIPQ9H8T0 292 aa8.37□□□□□ -1.07
SREK1-213ENST00000523655 LATS2Q9NRM7 1088 aa8.37□□□□□ -1.07
SREK1-213ENST00000523655 DZANK1Q9NVP4 752 aa8.37□□□□□ -1.07
SREK1-213ENST00000523655 TNFRSF21O75509 655 aa8.36□□□□□ -1.07
SREK1-213ENST00000523655 FAM13AO94988 1023 aa8.36□□□□□ -1.07
SREK1-213ENST00000523655 POLR3DP05423 398 aaPredicted RBP8.36□□□□□ -1.07
SREK1-213ENST00000523655 TTC16Q8NEE8 873 aa8.36□□□□□ -1.07
SREK1-213ENST00000523655 KLHDC7BQ96G42 594 aa8.36□□□□□ -1.07
SREK1-213ENST00000523655 CECR2Q9BXF3 1484 aa8.35□□□□□ -1.07
SREK1-213ENST00000523655 FSCN2O14926 492 aa8.35□□□□□ -1.07
SREK1-213ENST00000523655 ECM1Q16610 540 aa8.35□□□□□ -1.07
SREK1-213ENST00000523655 ALKBH2Q6NS38 261 aa8.35□□□□□ -1.07
SREK1-213ENST00000523655 RETREG2Q8NC44 543 aa8.35□□□□□ -1.07
SREK1-213ENST00000523655 MRPL18Q9H0U6 180 aaKnown RBP8.35□□□□□ -1.07
SREK1-213ENST00000523655 PODXL2Q9NZ53 605 aa8.35□□□□□ -1.07
SREK1-213ENST00000523655 ADAM11O75078 769 aa8.34□□□□□ -1.07
SREK1-213ENST00000523655 PHACTR2O75167 634 aa8.34□□□□□ -1.07
SREK1-213ENST00000523655 RPLP1P05386 114 aaKnown RBP8.34□□□□□ -1.07
SREK1-213ENST00000523655 H2AFB1P0C5Y9 115 aa8.34□□□□□ -1.07
SREK1-213ENST00000523655 H2AFB2P0C5Z0 115 aa8.34□□□□□ -1.07
SREK1-213ENST00000523655 PTPRAP18433 802 aa8.34□□□□□ -1.07
SREK1-213ENST00000523655 CD68P34810 354 aaPredicted RBP8.34□□□□□ -1.07
SREK1-213ENST00000523655 UBASH3BQ8TF42 649 aa8.34□□□□□ -1.07
SREK1-213ENST00000523655 OSMRQ99650 979 aa8.34□□□□□ -1.07
SREK1-213ENST00000523655 ZKSCAN3Q9BRR0 538 aa8.34□□□□□ -1.07
SREK1-213ENST00000523655 H3BRB1 525 aa8.33□□□□□ -1.08
SREK1-213ENST00000523655 PDE2AO00408 941 aaPredicted RBP8.33□□□□□ -1.08
SREK1-213ENST00000523655 GLB1P16278 677 aa8.33□□□□□ -1.08
SREK1-213ENST00000523655 SF3B2Q13435 895 aaKnown RBP8.33□□□□□ -1.08
SREK1-213ENST00000523655 ACAD11Q709F0 780 aa8.33□□□□□ -1.08
SREK1-213ENST00000523655 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.33□□□□□ -1.08
SREK1-213ENST00000523655 FOXD4L4Q8WXT5 416 aaPredicted RBP8.33□□□□□ -1.08
SREK1-213ENST00000523655 UBL7Q96S82 380 aaPredicted RBP8.33□□□□□ -1.08
SREK1-213ENST00000523655 ADAM19Q9H013 955 aa8.33□□□□□ -1.08
SREK1-213ENST00000523655 TUT1Q9H6E5 874 aaKnown RBP8.33□□□□□ -1.08
SREK1-213ENST00000523655 ICMTO60725 284 aa8.32□□□□□ -1.08
SREK1-213ENST00000523655 KIAA1211Q6ZU35 1233 aa8.32□□□□□ -1.08
SREK1-213ENST00000523655 DZIP1LQ8IYY4 767 aaKnown RBP8.32□□□□□ -1.08
SREK1-213ENST00000523655 TMEM130Q8N3G9 435 aa8.32□□□□□ -1.08
SREK1-213ENST00000523655 SLC7A3Q8WY07 619 aa8.32□□□□□ -1.08
SREK1-213ENST00000523655 MUC3BQ9H195 1237 aa8.32□□□□□ -1.08
SREK1-213ENST00000523655 USTQ9Y2C2 406 aa8.32□□□□□ -1.08
SREK1-213ENST00000523655 METTL12A8MUP2 240 aa8.31□□□□□ -1.08
SREK1-213ENST00000523655 PEAR1Q5VY43 1037 aaPredicted RBP8.31□□□□□ -1.08
SREK1-213ENST00000523655 USPL1Q5W0Q7 1092 aa8.31□□□□□ -1.08
SREK1-213ENST00000523655 MAP4K3Q8IVH8 894 aa8.31□□□□□ -1.08
SREK1-213ENST00000523655 GJD3Q8N144 294 aa8.31□□□□□ -1.08
SREK1-213ENST00000523655 CACTIN-AS1Q8N1I8 211 aa8.31□□□□□ -1.08
SREK1-213ENST00000523655 NXPE3Q969Y0 559 aa8.31□□□□□ -1.08
SREK1-213ENST00000523655 MTMR7Q9Y216 660 aa8.31□□□□□ -1.08
SREK1-213ENST00000523655 RB1CC1Q8TDY2 1594 aa8.31□□□□□ -1.08
SREK1-213ENST00000523655 SCO2A0A1W2PP80 73 aa8.3□□□□□ -1.08
SREK1-213ENST00000523655 NLRP12P59046 1061 aa8.3□□□□□ -1.08
SREK1-213ENST00000523655 SNX29Q8TEQ0 813 aa8.3□□□□□ -1.08
SREK1-213ENST00000523655 SRA1Q9HD15 236 aaKnown RBP8.3□□□□□ -1.08
SREK1-213ENST00000523655 SEC31BQ9NQW1 1179 aa8.3□□□□□ -1.08
SREK1-213ENST00000523655 H3BRJ5 948 aa8.29□□□□□ -1.08
SREK1-213ENST00000523655 DUOXA2Q1HG44 320 aa8.29□□□□□ -1.08
SREK1-213ENST00000523655 PRR23CQ6ZRP0 262 aa8.29□□□□□ -1.08
SREK1-213ENST00000523655 GLYCTKQ8IVS8 523 aa8.29□□□□□ -1.08
SREK1-213ENST00000523655 ASAP3Q8TDY4 903 aa8.29□□□□□ -1.08
SREK1-213ENST00000523655 ZFYVE28Q9HCC9 887 aa8.29□□□□□ -1.08
SREK1-213ENST00000523655 SOX13Q9UN79 622 aa8.29□□□□□ -1.08
SREK1-213ENST00000523655 SOX1O00570 391 aaPredicted RBP8.28□□□□□ -1.08
SREK1-213ENST00000523655 ARHGAP4P98171 946 aa8.28□□□□□ -1.08
SREK1-213ENST00000523655 FAM117BQ6P1L5 589 aa8.28□□□□□ -1.08
SREK1-213ENST00000523655 Q6ZS46 218 aa8.28□□□□□ -1.08
SREK1-213ENST00000523655 VN1R5Q7Z5H4 357 aa8.28□□□□□ -1.08
SREK1-213ENST00000523655 TMEM102Q8N9M5 508 aaPredicted RBP8.28□□□□□ -1.08
SREK1-213ENST00000523655 PMEPA1Q969W9 287 aa8.28□□□□□ -1.08
SREK1-213ENST00000523655 AMOTL2Q9Y2J4 779 aa8.27□□□□□ -1.09
SREK1-213ENST00000523655 USP5P45974 858 aa8.26□□□□□ -1.09
SREK1-213ENST00000523655 CABP4P57796 275 aa8.26□□□□□ -1.09
SREK1-213ENST00000523655 ORC1Q13415 861 aa8.26□□□□□ -1.09
SREK1-213ENST00000523655 TXNDC2Q86VQ3 553 aa8.26□□□□□ -1.09
SREK1-213ENST00000523655 ARMC10Q8N2F6 343 aa8.26□□□□□ -1.09
SREK1-213ENST00000523655 KLHL23Q8NBE8 558 aa8.26□□□□□ -1.09
SREK1-213ENST00000523655 EGFL7Q9UHF1 273 aa8.26□□□□□ -1.09
SREK1-213ENST00000523655 BRPF3Q9ULD4 1205 aa8.26□□□□□ -1.09
SREK1-213ENST00000523655 FAM177BA6PVY3 158 aa8.25□□□□□ -1.09
SREK1-213ENST00000523655 EDN3P14138 238 aa8.25□□□□□ -1.09
SREK1-213ENST00000523655 PIP4K2BP78356 416 aa8.25□□□□□ -1.09
SREK1-213ENST00000523655 EHHADHQ08426 723 aa8.25□□□□□ -1.09
SREK1-213ENST00000523655 BSNDQ8WZ55 320 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms