RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 WDR17Q8IZU2 1322 aa15.14■□□□□ 0.01
PCDHGB1-201ENST00000523390 LMTK2Q8IWU2 1503 aa15.14■□□□□ 0.01
PCDHGB1-201ENST00000523390 RIMBP2O15034 1052 aa15.14■□□□□ 0.01
PCDHGB1-201ENST00000523390 ISM2Q6H9L7 571 aa15.14■□□□□ 0.01
PCDHGB1-201ENST00000523390 ZNF804AQ7Z570 1209 aa15.14■□□□□ 0.01
PCDHGB1-201ENST00000523390 PKNOX2Q96KN3 472 aa15.14■□□□□ 0.01
PCDHGB1-201ENST00000523390 SLC27A2O14975 620 aa15.14■□□□□ 0.01
PCDHGB1-201ENST00000523390 ZSCAN23Q3MJ62 389 aa15.14■□□□□ 0.01
PCDHGB1-201ENST00000523390 MCM9Q9NXL9 1143 aa15.14■□□□□ 0.01
PCDHGB1-201ENST00000523390 HLA-DOAP06340 250 aa15.14■□□□□ 0.01
PCDHGB1-201ENST00000523390 INO80Q9ULG1 1556 aaPredicted RBP15.13■□□□□ 0.01
PCDHGB1-201ENST00000523390 CBFA2T2O43439 604 aa15.13■□□□□ 0.01
PCDHGB1-201ENST00000523390 TSPY3P0CV98 308 aa15.13■□□□□ 0.01
PCDHGB1-201ENST00000523390 TSPY8P0CW00 308 aa15.13■□□□□ 0.01
PCDHGB1-201ENST00000523390 BRINP3Q76B58 766 aa15.13■□□□□ 0.01
PCDHGB1-201ENST00000523390 HELLSQ9NRZ9 838 aa15.13■□□□□ 0.01
PCDHGB1-201ENST00000523390 AXIN2Q9Y2T1 843 aa15.13■□□□□ 0.01
PCDHGB1-201ENST00000523390 PTPDC1A2A3K4 754 aa15.13■□□□□ 0.01
PCDHGB1-201ENST00000523390 SYT1P21579 422 aa15.13■□□□□ 0.01
PCDHGB1-201ENST00000523390 ZKSCAN3Q9BRR0 538 aa15.13■□□□□ 0.01
PCDHGB1-201ENST00000523390 TMTC2Q8N394 836 aa15.12■□□□□ 0.01
PCDHGB1-201ENST00000523390 INTS4Q96HW7 963 aaKnown RBP15.12■□□□□ 0.01
PCDHGB1-201ENST00000523390 CTAGE5O15320 804 aa15.12■□□□□ 0.01
PCDHGB1-201ENST00000523390 ZAP70P43403 619 aa15.12■□□□□ 0.01
PCDHGB1-201ENST00000523390 ANKRD2Q9GZV1 360 aa15.12■□□□□ 0.01
PCDHGB1-201ENST00000523390 ANKARQ7Z5J8 1434 aa15.12■□□□□ 0.01
PCDHGB1-201ENST00000523390 GPAA1O43292 621 aa15.12■□□□□ 0.01
PCDHGB1-201ENST00000523390 ZNF165P49910 485 aa15.12■□□□□ 0.01
PCDHGB1-201ENST00000523390 APPBP2Q92624 585 aa15.12■□□□□ 0.01
PCDHGB1-201ENST00000523390 ZNHIT6Q9NWK9 470 aaKnown RBP15.12■□□□□ 0.01
PCDHGB1-201ENST00000523390 ZSCAN30Q86W11 494 aa15.12■□□□□ 0.01
PCDHGB1-201ENST00000523390 GNAT2P19087 354 aa15.11■□□□□ 0.01
PCDHGB1-201ENST00000523390 CT47A1Q5JQC4 288 aaPredicted RBP15.11■□□□□ 0.01
PCDHGB1-201ENST00000523390 ARMT1Q9H993 441 aa15.11■□□□□ 0.01
PCDHGB1-201ENST00000523390 B4E1Z4 1266 aa15.11■□□□□ 0.01
PCDHGB1-201ENST00000523390 LDHBP07195 334 aaKnown RBP15.11■□□□□ 0.01
PCDHGB1-201ENST00000523390 MARCKSP29966 332 aaPredicted RBP15.11■□□□□ 0.01
PCDHGB1-201ENST00000523390 TMEM132AQ24JP5 1023 aa15.11■□□□□ 0.01
PCDHGB1-201ENST00000523390 SIRT2Q8IXJ6 389 aa15.11■□□□□ 0.01
PCDHGB1-201ENST00000523390 DACT1Q9NYF0 836 aa15.11■□□□□ 0.01
PCDHGB1-201ENST00000523390 IBTKQ9P2D0 1353 aaPredicted RBP15.11■□□□□ 0.01
PCDHGB1-201ENST00000523390 FEZ1Q99689 392 aa15.1■□□□□ 0.01
PCDHGB1-201ENST00000523390 ZBTB1Q9Y2K1 713 aa15.1■□□□□ 0.01
PCDHGB1-201ENST00000523390 QRICH2Q9H0J4 1663 aa15.1■□□□□ 0.01
PCDHGB1-201ENST00000523390 TULP4Q9NRJ4 1543 aa15.1■□□□□ 0.01
PCDHGB1-201ENST00000523390 CAMSAP1Q5T5Y3 1602 aa15.1■□□□□ 0.01
PCDHGB1-201ENST00000523390 ATP5JP18859 108 aa15.1■□□□□ 0.01
PCDHGB1-201ENST00000523390 RPS6KB1P23443 525 aa15.1■□□□□ 0.01
PCDHGB1-201ENST00000523390 LRRC24Q50LG9 513 aa15.1■□□□□ 0.01
PCDHGB1-201ENST00000523390 LPIN2Q92539 896 aa15.1■□□□□ 0.01
PCDHGB1-201ENST00000523390 PARP3Q9Y6F1 533 aa15.1■□□□□ 0.01
PCDHGB1-201ENST00000523390 ERBB4Q15303 1308 aa15.1■□□□□ 0.01
PCDHGB1-201ENST00000523390 HIBADHP31937 336 aaKnown RBP15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 CABP5Q9NP86 173 aa15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 LOC102724428A0A0B4J2F2 783 aa15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 SIK1P57059 783 aa15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 CAGE1Q8TC20 777 aa15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 NCOA5Q9HCD5 579 aaKnown RBP15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 DENND2AQ9ULE3 1009 aa15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 SPATA31A3Q5VYP0 1347 aa15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 KIDINS220Q9ULH0 1771 aa15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 CYP27B1O15528 508 aa15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 UFL1O94874 794 aa15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 CTSWP56202 376 aa15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 FAM182BQ5T319 152 aa15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 FAM173BQ6P4H8 233 aa15.09■□□□□ 0.01
PCDHGB1-201ENST00000523390 A0A0D9SFI3 127 aa15.08■□□□□ 0.01
PCDHGB1-201ENST00000523390 UBA7P41226 1012 aa15.08■□□□□ 0.01
PCDHGB1-201ENST00000523390 PRDM1O75626 825 aa15.08■□□□□ 0
PCDHGB1-201ENST00000523390 EIF5P55010 431 aaKnown RBP15.08■□□□□ 0
PCDHGB1-201ENST00000523390 CCDC102BQ68D86 513 aa15.08■□□□□ 0
PCDHGB1-201ENST00000523390 UNC5CLQ8IV45 518 aa15.08■□□□□ 0
PCDHGB1-201ENST00000523390 CCDC12Q8WUD4 166 aaPredicted RBP15.08■□□□□ 0
PCDHGB1-201ENST00000523390 SEC62Q99442 399 aaKnown RBP15.08■□□□□ 0
PCDHGB1-201ENST00000523390 DEF6Q9H4E7 631 aa15.08■□□□□ 0
PCDHGB1-201ENST00000523390 PALD1Q9ULE6 856 aa15.08■□□□□ 0
PCDHGB1-201ENST00000523390 ADGRL3Q9HAR2 1447 aa15.08■□□□□ 0
PCDHGB1-201ENST00000523390 CCP110O43303 1012 aa15.08■□□□□ 0
PCDHGB1-201ENST00000523390 SFPQP23246 707 aaKnown RBP eCLIP15.08■□□□□ 0
PCDHGB1-201ENST00000523390 HSPA4P34932 840 aa15.08■□□□□ 0
PCDHGB1-201ENST00000523390 SETBP1Q9Y6X0 1596 aa15.07■□□□□ 0
PCDHGB1-201ENST00000523390 SYKP43405 635 aa15.07■□□□□ 0
PCDHGB1-201ENST00000523390 LRSAM1Q6UWE0 723 aa15.07■□□□□ 0
PCDHGB1-201ENST00000523390 KCNQ4P56696 695 aa15.07■□□□□ 0
PCDHGB1-201ENST00000523390 GPS2Q13227 327 aa15.07■□□□□ 0
PCDHGB1-201ENST00000523390 RAB34Q9BZG1 259 aa15.07■□□□□ 0
PCDHGB1-201ENST00000523390 CLTCQ00610 1675 aaKnown RBP15.07■□□□□ 0
PCDHGB1-201ENST00000523390 STX1AQ16623 288 aa15.07■□□□□ 0
PCDHGB1-201ENST00000523390 TMEM266Q2M3C6 531 aa15.07■□□□□ 0
PCDHGB1-201ENST00000523390 ZBTB38Q8NAP3 1195 aaPredicted RBP15.07■□□□□ 0
PCDHGB1-201ENST00000523390 PUS3Q9BZE2 481 aaKnown RBP15.07■□□□□ 0
PCDHGB1-201ENST00000523390 ADCY5O95622 1261 aa15.07■□□□□ 0
PCDHGB1-201ENST00000523390 PCCAP05165 728 aaPredicted RBP15.07■□□□□ 0
PCDHGB1-201ENST00000523390 IDEP14735 1019 aa15.07■□□□□ 0
PCDHGB1-201ENST00000523390 PTH1RQ03431 593 aa15.07■□□□□ 0
PCDHGB1-201ENST00000523390 HEATR3Q7Z4Q2 680 aa15.07■□□□□ 0
PCDHGB1-201ENST00000523390 ARGLU1Q9NWB6 273 aaPredicted RBP15.07■□□□□ 0
PCDHGB1-201ENST00000523390 CLIP2Q9UDT6 1046 aa15.07■□□□□ 0
PCDHGB1-201ENST00000523390 CLCN1P35523 988 aa15.06■□□□□ 0
PCDHGB1-201ENST00000523390 KCNG4Q8TDN1 519 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms