RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 H7C1W4 665 aa19.75■□□□□ 0.75
MRPS28-209ENST00000522987 KLRK1P26718 216 aa19.75■□□□□ 0.75
MRPS28-209ENST00000522987 CCT4P50991 539 aaKnown RBP19.75■□□□□ 0.75
MRPS28-209ENST00000522987 ZNF280AP59817 542 aaPredicted RBP19.75■□□□□ 0.75
MRPS28-209ENST00000522987 KIF23Q02241 960 aaPredicted RBP19.75■□□□□ 0.75
MRPS28-209ENST00000522987 FLIIQ13045 1269 aa19.75■□□□□ 0.75
MRPS28-209ENST00000522987 FAM161AQ3B820 660 aa19.75■□□□□ 0.75
MRPS28-209ENST00000522987 MOB2Q70IA6 237 aa19.75■□□□□ 0.75
MRPS28-209ENST00000522987 GMLQ99445 158 aa19.75■□□□□ 0.75
MRPS28-209ENST00000522987 MCOLN1Q9GZU1 580 aa19.75■□□□□ 0.75
MRPS28-209ENST00000522987 BSDC1Q9NW68 430 aaPredicted RBP19.75■□□□□ 0.75
MRPS28-209ENST00000522987 CCDC27Q2M243 656 aa19.74■□□□□ 0.75
MRPS28-209ENST00000522987 MED23Q9ULK4 1368 aa19.73■□□□□ 0.75
MRPS28-209ENST00000522987 CA12O43570 354 aa19.73■□□□□ 0.75
MRPS28-209ENST00000522987 ITGA6P23229 1130 aa19.73■□□□□ 0.75
MRPS28-209ENST00000522987 IGHMBP2P38935 993 aaKnown RBP19.73■□□□□ 0.75
MRPS28-209ENST00000522987 DGKZQ13574 1117 aa19.73■□□□□ 0.75
MRPS28-209ENST00000522987 GCKRQ14397 625 aa19.73■□□□□ 0.75
MRPS28-209ENST00000522987 NBPF9Q3BBW0 867 aa19.73■□□□□ 0.75
MRPS28-209ENST00000522987 PAPPA2Q9BXP8 1791 aa19.72■□□□□ 0.75
MRPS28-209ENST00000522987 SNAP23O00161 211 aa19.72■□□□□ 0.75
MRPS28-209ENST00000522987 EXOSC9Q06265 439 aaKnown RBP19.72■□□□□ 0.75
MRPS28-209ENST00000522987 PODNQ7Z5L7 613 aa19.72■□□□□ 0.75
MRPS28-209ENST00000522987 DNAAF4Q8WXU2 420 aa19.72■□□□□ 0.75
MRPS28-209ENST00000522987 ZNF609O15014 1411 aa19.71■□□□□ 0.75
MRPS28-209ENST00000522987 F6X3S4 739 aa19.71■□□□□ 0.75
MRPS28-209ENST00000522987 TRPA1O75762 1119 aa19.71■□□□□ 0.75
MRPS28-209ENST00000522987 SASH1O94885 1247 aa19.71■□□□□ 0.75
MRPS28-209ENST00000522987 DACT2Q5SW24 774 aa19.71■□□□□ 0.75
MRPS28-209ENST00000522987 CCDC102AQ96A19 550 aa19.71■□□□□ 0.75
MRPS28-209ENST00000522987 CHMP3Q9Y3E7 222 aa19.71■□□□□ 0.75
MRPS28-209ENST00000522987 IL16Q14005 1332 aa19.71■□□□□ 0.75
MRPS28-209ENST00000522987 SLC10A3P09131 477 aa19.7■□□□□ 0.74
MRPS28-209ENST00000522987 CASP7P55210 303 aa19.7■□□□□ 0.74
MRPS28-209ENST00000522987 HELBQ8NG08 1087 aaPredicted RBP19.7■□□□□ 0.74
MRPS28-209ENST00000522987 MPHOSPH8Q99549 860 aa19.7■□□□□ 0.74
MRPS28-209ENST00000522987 ZNF804BA4D1E1 1349 aa19.7■□□□□ 0.74
MRPS28-209ENST00000522987 UBE2Q2LH0YL09 131 aa19.69■□□□□ 0.74
MRPS28-209ENST00000522987 KCNJ4P48050 445 aa19.69■□□□□ 0.74
MRPS28-209ENST00000522987 TTLL12Q14166 644 aaPredicted RBP19.69■□□□□ 0.74
MRPS28-209ENST00000522987 RASAL3Q86YV0 1011 aa19.69■□□□□ 0.74
MRPS28-209ENST00000522987 MYH16Q9H6N6 1097 aa19.69■□□□□ 0.74
MRPS28-209ENST00000522987 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
MRPS28-209ENST00000522987 RNF186Q9NXI6 227 aa19.69■□□□□ 0.74
MRPS28-209ENST00000522987 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.69■□□□□ 0.74
MRPS28-209ENST00000522987 VAMP4O75379 141 aa19.68■□□□□ 0.74
MRPS28-209ENST00000522987 TAF5LO75529 589 aa19.68■□□□□ 0.74
MRPS28-209ENST00000522987 GTF2IP78347 998 aa19.68■□□□□ 0.74
MRPS28-209ENST00000522987 CHRNDQ07001 517 aa19.68■□□□□ 0.74
MRPS28-209ENST00000522987 PRKG1Q13976 671 aa19.68■□□□□ 0.74
MRPS28-209ENST00000522987 KIAA0825Q8IV33 1275 aa19.68■□□□□ 0.74
MRPS28-209ENST00000522987 LINS1Q8NG48 757 aa19.68■□□□□ 0.74
MRPS28-209ENST00000522987 CSRNP1Q96S65 589 aa19.68■□□□□ 0.74
MRPS28-209ENST00000522987 COA1Q9GZY4 146 aa19.68■□□□□ 0.74
MRPS28-209ENST00000522987 ECM29Q5VYK3 1845 aa19.67■□□□□ 0.74
MRPS28-209ENST00000522987 ANP32CO43423 234 aa19.67■□□□□ 0.74
MRPS28-209ENST00000522987 MKRN3Q13064 507 aaKnown RBP19.67■□□□□ 0.74
MRPS28-209ENST00000522987 TTLL5Q6EMB2 1281 aa19.67■□□□□ 0.74
MRPS28-209ENST00000522987 PLA2G12BQ9BX93 195 aa19.67■□□□□ 0.74
MRPS28-209ENST00000522987 LEMD3Q9Y2U8 911 aa19.67■□□□□ 0.74
MRPS28-209ENST00000522987 WNT10BO00744 389 aa19.66■□□□□ 0.74
MRPS28-209ENST00000522987 OGFOD1Q8N543 542 aa19.66■□□□□ 0.74
MRPS28-209ENST00000522987 ANKRD2Q9GZV1 360 aa19.66■□□□□ 0.74
MRPS28-209ENST00000522987 JAG2Q9Y219 1238 aa19.66■□□□□ 0.74
MRPS28-209ENST00000522987 PITPNM2Q9BZ72 1349 aa19.66■□□□□ 0.74
MRPS28-209ENST00000522987 ANKRD18BA2A2Z9 1011 aa19.65■□□□□ 0.74
MRPS28-209ENST00000522987 PLIN1O60240 522 aa19.65■□□□□ 0.74
MRPS28-209ENST00000522987 CSF1RP07333 972 aa19.65■□□□□ 0.74
MRPS28-209ENST00000522987 STRIP1Q5VSL9 837 aa19.65■□□□□ 0.74
MRPS28-209ENST00000522987 FAM9BQ8IZU0 186 aa19.65■□□□□ 0.74
MRPS28-209ENST00000522987 ZNF594Q96JF6 807 aaPredicted RBP19.65■□□□□ 0.74
MRPS28-209ENST00000522987 FOXO4P98177 505 aa19.64■□□□□ 0.73
MRPS28-209ENST00000522987 EPHA10Q5JZY3 1008 aa19.64■□□□□ 0.73
MRPS28-209ENST00000522987 FZD1Q9UP38 647 aa19.64■□□□□ 0.73
MRPS28-209ENST00000522987 PCDHAC2Q9Y5I4 1007 aa19.64■□□□□ 0.73
MRPS28-209ENST00000522987 MYO3BQ8WXR4 1341 aa19.63■□□□□ 0.73
MRPS28-209ENST00000522987 F8W031 263 aaPredicted RBP19.63■□□□□ 0.73
MRPS28-209ENST00000522987 WDR63Q8IWG1 891 aa19.63■□□□□ 0.73
MRPS28-209ENST00000522987 MLLT1Q03111 559 aaPredicted RBP19.62■□□□□ 0.73
MRPS28-209ENST00000522987 IFIT5Q13325 482 aaKnown RBP19.62■□□□□ 0.73
MRPS28-209ENST00000522987 BEND3Q5T5X7 828 aa19.62■□□□□ 0.73
MRPS28-209ENST00000522987 SLC4A10Q6U841 1118 aa19.62■□□□□ 0.73
MRPS28-209ENST00000522987 LMBR1LQ6UX01 489 aa19.62■□□□□ 0.73
MRPS28-209ENST00000522987 CD209Q9NNX6 404 aa19.62■□□□□ 0.73
MRPS28-209ENST00000522987 SAGE1Q9NXZ1 904 aa19.62■□□□□ 0.73
MRPS28-209ENST00000522987 CERS5Q8N5B7 392 aa19.61■□□□□ 0.73
MRPS28-209ENST00000522987 HDAC9Q9UKV0 1011 aa19.61■□□□□ 0.73
MRPS28-209ENST00000522987 ZNF316A6NFI3 1004 aaPredicted RBP19.6■□□□□ 0.73
MRPS28-209ENST00000522987 TBC1D8O95759 1140 aa19.6■□□□□ 0.73
MRPS28-209ENST00000522987 FKBP1BP68106 108 aa19.6■□□□□ 0.73
MRPS28-209ENST00000522987 TAF7LQ5H9L4 462 aa19.6■□□□□ 0.73
MRPS28-209ENST00000522987 IRS2Q9Y4H2 1338 aa19.59■□□□□ 0.73
MRPS28-209ENST00000522987 NF2P35240 595 aa19.59■□□□□ 0.73
MRPS28-209ENST00000522987 SOX10P56693 466 aa19.59■□□□□ 0.73
MRPS28-209ENST00000522987 CLRN2A0PK11 232 aa19.58■□□□□ 0.72
MRPS28-209ENST00000522987 GRM8O00222 908 aa19.58■□□□□ 0.72
MRPS28-209ENST00000522987 PTPN12Q05209 780 aaKnown RBP19.58■□□□□ 0.72
MRPS28-209ENST00000522987 C9orf78Q9NZ63 289 aaPredicted RBP19.58■□□□□ 0.72
MRPS28-209ENST00000522987 ANGEL1Q9UNK9 670 aaKnown RBP19.58■□□□□ 0.72
MRPS28-209ENST00000522987 AOX1Q06278 1338 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms