RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 ITGA6P23229 1130 aa12.72□□□□□ -0.37
RAB11FIP1-204ENST00000522774 RESTQ13127 1097 aa12.72□□□□□ -0.37
RAB11FIP1-204ENST00000522774 NSUN7Q8NE18 718 aaKnown RBP12.72□□□□□ -0.37
RAB11FIP1-204ENST00000522774 TTLL11Q8NHH1 800 aa12.72□□□□□ -0.37
RAB11FIP1-204ENST00000522774 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
RAB11FIP1-204ENST00000522774 AGXT2Q9BYV1 514 aa12.72□□□□□ -0.37
RAB11FIP1-204ENST00000522774 RIPOR2Q9Y4F9 1068 aa12.72□□□□□ -0.37
RAB11FIP1-204ENST00000522774 PPFIA3O75145 1194 aa12.71□□□□□ -0.37
RAB11FIP1-204ENST00000522774 CCT2P78371 535 aaKnown RBP12.71□□□□□ -0.37
RAB11FIP1-204ENST00000522774 WASHC4Q2M389 1173 aa12.71□□□□□ -0.37
RAB11FIP1-204ENST00000522774 LEO1Q8WVC0 666 aaPredicted RBP12.71□□□□□ -0.37
RAB11FIP1-204ENST00000522774 SPATA32Q96LK8 384 aa12.71□□□□□ -0.37
RAB11FIP1-204ENST00000522774 ZKSCAN5Q9Y2L8 839 aa12.71□□□□□ -0.37
RAB11FIP1-204ENST00000522774 NWD2Q9ULI1 1742 aa12.71□□□□□ -0.37
RAB11FIP1-204ENST00000522774 CDHR2Q9BYE9 1310 aa12.71□□□□□ -0.37
RAB11FIP1-204ENST00000522774 FOSBP53539 338 aa12.71□□□□□ -0.38
RAB11FIP1-204ENST00000522774 UVSSAQ2YD98 709 aa12.71□□□□□ -0.38
RAB11FIP1-204ENST00000522774 METTL24Q5JXM2 366 aa12.71□□□□□ -0.38
RAB11FIP1-204ENST00000522774 NCOA5Q9HCD5 579 aaKnown RBP12.71□□□□□ -0.38
RAB11FIP1-204ENST00000522774 CCDC39Q9UFE4 941 aa12.71□□□□□ -0.38
RAB11FIP1-204ENST00000522774 HAND2P61296 217 aa12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ATP2B3Q16720 1220 aa12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 LDHAL6AQ6ZMR3 332 aa12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 SCAND2PQ9GZW5 306 aaPredicted RBP12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 H3BQV1 296 aa12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 CTSWP56202 376 aa12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 IFFO2Q5TF58 517 aa12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 PUS7LQ9H0K6 701 aaKnown RBP12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 GPHNQ9NQX3 736 aaPredicted RBP12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 COL14A1Q05707 1796 aaKnown RBP12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ANKRD36CQ5JPF3 1778 aa12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 PTPDC1A2A3K4 754 aa12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 IRS4O14654 1257 aaPredicted RBP12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 MCAMP43121 646 aa12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 CAMK4Q16566 473 aa12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 MPNDQ8N594 471 aa12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 NAP1L2Q9ULW6 460 aaPredicted RBP12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
RAB11FIP1-204ENST00000522774 PGBD1Q96JS3 809 aa12.69□□□□□ -0.38
RAB11FIP1-204ENST00000522774 LLPHQ9BRT6 129 aaKnown RBP12.69□□□□□ -0.38
RAB11FIP1-204ENST00000522774 TRMT112Q9UI30 125 aaKnown RBP12.69□□□□□ -0.38
RAB11FIP1-204ENST00000522774 NUP98P52948 1817 aa12.69□□□□□ -0.38
RAB11FIP1-204ENST00000522774 AKAP11Q9UKA4 1901 aa12.69□□□□□ -0.38
RAB11FIP1-204ENST00000522774 MYH3P11055 1940 aa12.69□□□□□ -0.38
RAB11FIP1-204ENST00000522774 PDIA3P30101 505 aaKnown RBP12.69□□□□□ -0.38
RAB11FIP1-204ENST00000522774 UBN2Q6ZU65 1347 aa12.69□□□□□ -0.38
RAB11FIP1-204ENST00000522774 DACT1Q9NYF0 836 aa12.69□□□□□ -0.38
RAB11FIP1-204ENST00000522774 COL16A1Q07092 1604 aaPredicted RBP12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 EXOC5O00471 708 aa12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ZNF500O60304 480 aaPredicted RBP12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ADCY5O95622 1261 aa12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 FGAP02671 866 aa12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 PTMAP06454 111 aaKnown RBP12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 VGLL2Q8N8G2 317 aa12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 NUP62CLQ9H1M0 184 aa12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 CNNM1Q9NRU3 951 aa12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 MYH7P12883 1935 aa12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ANKRD18BA2A2Z9 1011 aa12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ZFYP08048 801 aaPredicted RBP12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 APPBP2Q92624 585 aa12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 SALL1Q9NSC2 1324 aa12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 GOLGA6L4A6NEF3 574 aa12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 DZIP3Q86Y13 1208 aaKnown RBP12.68□□□□□ -0.38
RAB11FIP1-204ENST00000522774 SLIT2O94813 1529 aa12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 AP5Z1O43299 807 aa12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 OFD1O75665 1012 aa12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 LRRFIP1Q32MZ4 808 aaKnown RBP12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 FTOQ9C0B1 505 aaKnown RBP eCLIP12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 PLCH1Q4KWH8 1693 aa12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 MYO5AQ9Y4I1 1855 aaKnown RBP12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 GPAA1O43292 621 aa12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 KDM4AO75164 1064 aa12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ADD1P35611 737 aaKnown RBP12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 CEBPZQ03701 1054 aaKnown RBP12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 MAP3K11Q16584 847 aa12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 CKAP2LQ8IYA6 745 aa12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ZNF274Q96GC6 653 aaPredicted RBP12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ZSCAN16Q9H4T2 348 aaPredicted RBP12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.67□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ABCC12Q96J65 1359 aa12.66□□□□□ -0.38
RAB11FIP1-204ENST00000522774 NR1I2O75469 434 aa12.66□□□□□ -0.38
RAB11FIP1-204ENST00000522774 CCDC192P0DO97 292 aa12.66□□□□□ -0.38
RAB11FIP1-204ENST00000522774 GUCY1B3Q02153 619 aa12.66□□□□□ -0.38
RAB11FIP1-204ENST00000522774 IMMTQ16891 758 aaKnown RBP12.66□□□□□ -0.38
RAB11FIP1-204ENST00000522774 CTNNA3Q9UI47 895 aa12.66□□□□□ -0.38
RAB11FIP1-204ENST00000522774 DOT1LQ8TEK3 1739 aa12.66□□□□□ -0.38
RAB11FIP1-204ENST00000522774 PDE8AO60658 829 aa12.66□□□□□ -0.38
RAB11FIP1-204ENST00000522774 HMGN5P82970 282 aaKnown RBP12.66□□□□□ -0.38
RAB11FIP1-204ENST00000522774 NAA16Q6N069 864 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP1-204ENST00000522774 PIH1D3Q9NQM4 214 aaKnown RBP12.66□□□□□ -0.38
RAB11FIP1-204ENST00000522774 MYH15Q9Y2K3 1946 aa12.66□□□□□ -0.38
RAB11FIP1-204ENST00000522774 MCM5P33992 734 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 IL6STP40189 918 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 PHKA1P46020 1223 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 PLCB2Q00722 1185 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 TYRO3Q06418 890 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 MB21D2Q8IYB1 491 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 KLHL34Q8N239 644 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 HELBQ8NG08 1087 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 BICD2Q8TD16 824 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms