RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 BSDC1Q9NW68 430 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC9-213ENST00000522504 PSME4Q14997 1843 aa19.67■□□□□ 0.74
TRAPPC9-213ENST00000522504 G2E3Q7L622 706 aa19.67■□□□□ 0.74
TRAPPC9-213ENST00000522504 CDC5LQ99459 802 aaKnown RBP19.67■□□□□ 0.74
TRAPPC9-213ENST00000522504 PITPNM2Q9BZ72 1349 aa19.67■□□□□ 0.74
TRAPPC9-213ENST00000522504 MED23Q9ULK4 1368 aa19.67■□□□□ 0.74
TRAPPC9-213ENST00000522504 NEURL1BA8MQ27 555 aa19.66■□□□□ 0.74
TRAPPC9-213ENST00000522504 UBE2Q2LH0YL09 131 aa19.66■□□□□ 0.74
TRAPPC9-213ENST00000522504 KLRK1P26718 216 aa19.66■□□□□ 0.74
TRAPPC9-213ENST00000522504 CCT4P50991 539 aaKnown RBP19.66■□□□□ 0.74
TRAPPC9-213ENST00000522504 FKBP1BP68106 108 aa19.66■□□□□ 0.74
TRAPPC9-213ENST00000522504 SOX10P56693 466 aa19.65■□□□□ 0.74
TRAPPC9-213ENST00000522504 CCDC184Q52MB2 194 aa19.65■□□□□ 0.74
TRAPPC9-213ENST00000522504 PAPPA2Q9BXP8 1791 aa19.65■□□□□ 0.74
TRAPPC9-213ENST00000522504 H7C1W4 665 aa19.64■□□□□ 0.73
TRAPPC9-213ENST00000522504 WNT10BO00744 389 aa19.64■□□□□ 0.73
TRAPPC9-213ENST00000522504 UBE3BQ7Z3V4 1068 aa19.64■□□□□ 0.73
TRAPPC9-213ENST00000522504 HTTP42858 3142 aa19.64■□□□□ 0.73
TRAPPC9-213ENST00000522504 ZNF646O15015 1829 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC9-213ENST00000522504 FBXW7Q969H0 707 aa19.63■□□□□ 0.73
TRAPPC9-213ENST00000522504 SASH1O94885 1247 aa19.62■□□□□ 0.73
TRAPPC9-213ENST00000522504 CASP7P55210 303 aa19.62■□□□□ 0.73
TRAPPC9-213ENST00000522504 STRIP1Q5VSL9 837 aa19.62■□□□□ 0.73
TRAPPC9-213ENST00000522504 CTU1Q7Z7A3 348 aaKnown RBP19.62■□□□□ 0.73
TRAPPC9-213ENST00000522504 AKAP11Q9UKA4 1901 aa19.61■□□□□ 0.73
TRAPPC9-213ENST00000522504 SPEF2Q9C093 1822 aa19.61■□□□□ 0.73
TRAPPC9-213ENST00000522504 PDE4DIPQ5VU43 2346 aa19.61■□□□□ 0.73
TRAPPC9-213ENST00000522504 TBC1D8O95759 1140 aa19.61■□□□□ 0.73
TRAPPC9-213ENST00000522504 NEXNQ0ZGT2 675 aa19.61■□□□□ 0.73
TRAPPC9-213ENST00000522504 REM2Q8IYK8 340 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC9-213ENST00000522504 COA1Q9GZY4 146 aa19.61■□□□□ 0.73
TRAPPC9-213ENST00000522504 SLC4A2P04920 1241 aa19.6■□□□□ 0.73
TRAPPC9-213ENST00000522504 MKRN3Q13064 507 aaKnown RBP19.6■□□□□ 0.73
TRAPPC9-213ENST00000522504 GCKRQ14397 625 aa19.6■□□□□ 0.73
TRAPPC9-213ENST00000522504 TWISTNBQ3B726 338 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC9-213ENST00000522504 OGFOD1Q8N543 542 aa19.6■□□□□ 0.73
TRAPPC9-213ENST00000522504 STK31Q9BXU1 1019 aa19.6■□□□□ 0.73
TRAPPC9-213ENST00000522504 CHMP4AQ9BY43 222 aa19.6■□□□□ 0.73
TRAPPC9-213ENST00000522504 LEMD3Q9Y2U8 911 aa19.6■□□□□ 0.73
TRAPPC9-213ENST00000522504 ZNF804BA4D1E1 1349 aa19.59■□□□□ 0.73
TRAPPC9-213ENST00000522504 MKI67P46013 3256 aaKnown RBP19.59■□□□□ 0.73
TRAPPC9-213ENST00000522504 SNAP23O00161 211 aa19.59■□□□□ 0.73
TRAPPC9-213ENST00000522504 ITGA6P23229 1130 aa19.59■□□□□ 0.73
TRAPPC9-213ENST00000522504 TTLL12Q14166 644 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC9-213ENST00000522504 WWC1Q8IX03 1113 aa19.59■□□□□ 0.73
TRAPPC9-213ENST00000522504 ZNF296Q8WUU4 475 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC9-213ENST00000522504 ZBED3Q96IU2 234 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC9-213ENST00000522504 PLA2G12BQ9BX93 195 aa19.59■□□□□ 0.73
TRAPPC9-213ENST00000522504 CENPFP49454 3210 aa19.59■□□□□ 0.73
TRAPPC9-213ENST00000522504 MYO3BQ8WXR4 1341 aa19.58■□□□□ 0.73
TRAPPC9-213ENST00000522504 CSF1RP07333 972 aa19.58■□□□□ 0.72
TRAPPC9-213ENST00000522504 IGHMBP2P38935 993 aaKnown RBP19.58■□□□□ 0.72
TRAPPC9-213ENST00000522504 PTPN12Q05209 780 aaKnown RBP19.58■□□□□ 0.72
TRAPPC9-213ENST00000522504 TTLL5Q6EMB2 1281 aa19.58■□□□□ 0.72
TRAPPC9-213ENST00000522504 KIAA0825Q8IV33 1275 aa19.58■□□□□ 0.72
TRAPPC9-213ENST00000522504 HPS5Q9UPZ3 1129 aa19.58■□□□□ 0.72
TRAPPC9-213ENST00000522504 MYH3P11055 1940 aa19.57■□□□□ 0.72
TRAPPC9-213ENST00000522504 TM4SF4P48230 202 aa19.57■□□□□ 0.72
TRAPPC9-213ENST00000522504 GTF2IP78347 998 aa19.57■□□□□ 0.72
TRAPPC9-213ENST00000522504 FLIIQ13045 1269 aa19.57■□□□□ 0.72
TRAPPC9-213ENST00000522504 PRKG1Q13976 671 aa19.57■□□□□ 0.72
TRAPPC9-213ENST00000522504 CCDC27Q2M243 656 aa19.57■□□□□ 0.72
TRAPPC9-213ENST00000522504 R3HDMLQ9H3Y0 253 aa19.57■□□□□ 0.72
TRAPPC9-213ENST00000522504 FZD1Q9UP38 647 aa19.57■□□□□ 0.72
TRAPPC9-213ENST00000522504 IRS2Q9Y4H2 1338 aa19.56■□□□□ 0.72
TRAPPC9-213ENST00000522504 CHRNDQ07001 517 aa19.56■□□□□ 0.72
TRAPPC9-213ENST00000522504 CERS5Q8N5B7 392 aa19.56■□□□□ 0.72
TRAPPC9-213ENST00000522504 ANKRD2Q9GZV1 360 aa19.56■□□□□ 0.72
TRAPPC9-213ENST00000522504 PCDHAC2Q9Y5I4 1007 aa19.56■□□□□ 0.72
TRAPPC9-213ENST00000522504 LDLRAD1Q5T700 205 aa19.54■□□□□ 0.72
TRAPPC9-213ENST00000522504 HELBQ8NG08 1087 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC9-213ENST00000522504 DNAAF4Q8WXU2 420 aa19.54■□□□□ 0.72
TRAPPC9-213ENST00000522504 MPHOSPH8Q99549 860 aa19.54■□□□□ 0.72
TRAPPC9-213ENST00000522504 CD209Q9NNX6 404 aa19.54■□□□□ 0.72
TRAPPC9-213ENST00000522504 GPR25O00155 361 aa19.53■□□□□ 0.72
TRAPPC9-213ENST00000522504 TAF5LO75529 589 aa19.53■□□□□ 0.72
TRAPPC9-213ENST00000522504 NF2P35240 595 aa19.53■□□□□ 0.72
TRAPPC9-213ENST00000522504 FKBP5Q13451 457 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC9-213ENST00000522504 APOBEC3FQ8IUX4 373 aaKnown RBP19.53■□□□□ 0.72
TRAPPC9-213ENST00000522504 HDAC9Q9UKV0 1011 aa19.53■□□□□ 0.72
TRAPPC9-213ENST00000522504 AOX1Q06278 1338 aa19.52■□□□□ 0.72
TRAPPC9-213ENST00000522504 BRCA2P51587 3418 aa19.52■□□□□ 0.72
TRAPPC9-213ENST00000522504 KCNJ4P48050 445 aa19.52■□□□□ 0.72
TRAPPC9-213ENST00000522504 MMP14P50281 582 aa19.52■□□□□ 0.72
TRAPPC9-213ENST00000522504 FOXO4P98177 505 aa19.52■□□□□ 0.72
TRAPPC9-213ENST00000522504 LINS1Q8NG48 757 aa19.52■□□□□ 0.72
TRAPPC9-213ENST00000522504 IL16Q14005 1332 aa19.51■□□□□ 0.71
TRAPPC9-213ENST00000522504 FANCIQ9NVI1 1328 aa19.51■□□□□ 0.71
TRAPPC9-213ENST00000522504 SPRYD7Q5W111 196 aa19.51■□□□□ 0.71
TRAPPC9-213ENST00000522504 ARMC9Q7Z3E5 817 aa19.51■□□□□ 0.71
TRAPPC9-213ENST00000522504 DEFB129Q9H1M3 183 aa19.51■□□□□ 0.71
TRAPPC9-213ENST00000522504 MYH16Q9H6N6 1097 aa19.51■□□□□ 0.71
TRAPPC9-213ENST00000522504 ANGEL1Q9UNK9 670 aaKnown RBP19.51■□□□□ 0.71
TRAPPC9-213ENST00000522504 SSC5DA1L4H1 1573 aa19.51■□□□□ 0.71
TRAPPC9-213ENST00000522504 ANKRD18BA2A2Z9 1011 aa19.5■□□□□ 0.71
TRAPPC9-213ENST00000522504 F6X3S4 739 aa19.5■□□□□ 0.71
TRAPPC9-213ENST00000522504 VAMP4O75379 141 aa19.5■□□□□ 0.71
TRAPPC9-213ENST00000522504 PKN2Q16513 984 aaKnown RBP19.5■□□□□ 0.71
TRAPPC9-213ENST00000522504 NOM1Q5C9Z4 860 aaKnown RBP19.5■□□□□ 0.71
TRAPPC9-213ENST00000522504 EPHA10Q5JZY3 1008 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms