RNA–Protein interactions for RNA: ENST00000522501.1

CDKL3-208, Transcript of cyclin dependent kinase like 3, human

TSL 3

Gene CDKL3, Length 432 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDKL3-208	ENST00000522501	ECE2	O60344	883 aa		11.23	□□□□□ -0.61
CDKL3-208	ENST00000522501	ANXA1	P04083	346 aa		11.23	□□□□□ -0.61
CDKL3-208	ENST00000522501	FBXO22	Q8NEZ5	403 aa		11.23	□□□□□ -0.61
CDKL3-208	ENST00000522501	CDCA5	Q96FF9	252 aa		11.23	□□□□□ -0.61
CDKL3-208	ENST00000522501	TRMT112	Q9UI30	125 aa	Known RBP	11.23	□□□□□ -0.61
CDKL3-208	ENST00000522501	ASTN2	O75129	1339 aa	Predicted RBP	11.22	□□□□□ -0.61
CDKL3-208	ENST00000522501	SULF1	Q8IWU6	871 aa		11.22	□□□□□ -0.61
CDKL3-208	ENST00000522501	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.22	□□□□□ -0.61
CDKL3-208	ENST00000522501	TSPYL4	Q9UJ04	414 aa		11.22	□□□□□ -0.61
CDKL3-208	ENST00000522501	BRCA2	P51587	3418 aa		11.22	□□□□□ -0.61
CDKL3-208	ENST00000522501	EIF2S2	P20042	333 aa	Known RBP	11.21	□□□□□ -0.61
CDKL3-208	ENST00000522501	TCIRG1	Q13488	830 aa		11.21	□□□□□ -0.61
CDKL3-208	ENST00000522501	PKN2	Q16513	984 aa	Known RBP	11.21	□□□□□ -0.61
CDKL3-208	ENST00000522501	XAGE3	Q8WTP9	111 aa		11.21	□□□□□ -0.61
CDKL3-208	ENST00000522501	CELF1	Q92879	486 aa	Known RBP	11.21	□□□□□ -0.61
CDKL3-208	ENST00000522501	EYA3	Q99504	573 aa		11.21	□□□□□ -0.61
CDKL3-208	ENST00000522501	KCNQ5	Q9NR82	932 aa		11.21	□□□□□ -0.61
CDKL3-208	ENST00000522501	POLL	Q9UGP5	575 aa		11.21	□□□□□ -0.61
CDKL3-208	ENST00000522501	PITPNM2	Q9BZ72	1349 aa		11.2	□□□□□ -0.62
CDKL3-208	ENST00000522501	MAPK8IP3	Q9UPT6	1336 aa		11.2	□□□□□ -0.62
CDKL3-208	ENST00000522501	VIL1	P09327	827 aa	Known RBP	11.2	□□□□□ -0.62
CDKL3-208	ENST00000522501	FKBP1B	P68106	108 aa		11.2	□□□□□ -0.62
CDKL3-208	ENST00000522501	GPSM2	P81274	684 aa		11.2	□□□□□ -0.62
CDKL3-208	ENST00000522501	COPS6	Q7L5N1	327 aa		11.2	□□□□□ -0.62
CDKL3-208	ENST00000522501	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.2	□□□□□ -0.62
CDKL3-208	ENST00000522501	C6orf229	H3BNL8	230 aa		11.19	□□□□□ -0.62
CDKL3-208	ENST00000522501	RIMBP2	O15034	1052 aa		11.19	□□□□□ -0.62
CDKL3-208	ENST00000522501	ZNF280A	P59817	542 aa	Predicted RBP	11.19	□□□□□ -0.62
CDKL3-208	ENST00000522501	SF3B3	Q15393	1217 aa	Known RBP	11.19	□□□□□ -0.62
CDKL3-208	ENST00000522501	DOK7	Q18PE1	504 aa		11.19	□□□□□ -0.62
CDKL3-208	ENST00000522501	RBM26	Q5T8P6	1007 aa	Known RBP	11.19	□□□□□ -0.62
CDKL3-208	ENST00000522501	TBC1D16	Q8TBP0	767 aa		11.19	□□□□□ -0.62
CDKL3-208	ENST00000522501	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.19	□□□□□ -0.62
CDKL3-208	ENST00000522501	BABAM1	Q9NWV8	329 aa		11.19	□□□□□ -0.62
CDKL3-208	ENST00000522501	ARAP2	Q8WZ64	1704 aa		11.18	□□□□□ -0.62
CDKL3-208	ENST00000522501	AIMP1	Q12904	312 aa	Known RBP	11.18	□□□□□ -0.62
CDKL3-208	ENST00000522501	NOM1	Q5C9Z4	860 aa	Known RBP	11.18	□□□□□ -0.62
CDKL3-208	ENST00000522501	ANGEL2	Q5VTE6	544 aa	Known RBP	11.18	□□□□□ -0.62
CDKL3-208	ENST00000522501	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.18	□□□□□ -0.62
CDKL3-208	ENST00000522501	PODXL2	Q9NZ53	605 aa		11.18	□□□□□ -0.62
CDKL3-208	ENST00000522501	KIAA0100	Q14667	2235 aa	Known RBP	11.17	□□□□□ -0.62
CDKL3-208	ENST00000522501	GABBR2	O75899	941 aa		11.17	□□□□□ -0.62
CDKL3-208	ENST00000522501	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
CDKL3-208	ENST00000522501	GOLGA2	Q08379	1002 aa		11.17	□□□□□ -0.62
CDKL3-208	ENST00000522501	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.17	□□□□□ -0.62
CDKL3-208	ENST00000522501	AGBL3	Q8NEM8	1001 aa		11.17	□□□□□ -0.62
CDKL3-208	ENST00000522501	GCC1	Q96CN9	775 aa		11.17	□□□□□ -0.62
CDKL3-208	ENST00000522501	ISCA1	Q9BUE6	129 aa		11.17	□□□□□ -0.62
CDKL3-208	ENST00000522501	HDAC9	Q9UKV0	1011 aa		11.17	□□□□□ -0.62
CDKL3-208	ENST00000522501	UFL1	O94874	794 aa		11.16	□□□□□ -0.62
CDKL3-208	ENST00000522501	SCARF1	Q14162	830 aa		11.16	□□□□□ -0.62
CDKL3-208	ENST00000522501	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.16	□□□□□ -0.62
CDKL3-208	ENST00000522501	NECTIN2	Q92692	538 aa		11.16	□□□□□ -0.62
CDKL3-208	ENST00000522501	ZNF428	Q96B54	188 aa		11.16	□□□□□ -0.62
CDKL3-208	ENST00000522501	FAM89A	Q96GI7	184 aa		11.16	□□□□□ -0.62
CDKL3-208	ENST00000522501	CFHR5	Q9BXR6	569 aa		11.16	□□□□□ -0.62
CDKL3-208	ENST00000522501	CHPF2	Q9P2E5	772 aa		11.16	□□□□□ -0.62
CDKL3-208	ENST00000522501	COL1A1	P02452	1464 aa	Predicted RBP	11.16	□□□□□ -0.62
CDKL3-208	ENST00000522501	TBC1D8	O95759	1140 aa		11.15	□□□□□ -0.62
CDKL3-208	ENST00000522501	MKRN3	Q13064	507 aa	Known RBP	11.15	□□□□□ -0.62
CDKL3-208	ENST00000522501	ASTL	Q6HA08	431 aa	Predicted RBP	11.15	□□□□□ -0.62
CDKL3-208	ENST00000522501	MOB2	Q70IA6	237 aa		11.15	□□□□□ -0.62
CDKL3-208	ENST00000522501	PLBD2	Q8NHP8	589 aa		11.15	□□□□□ -0.62
CDKL3-208	ENST00000522501	GML	Q99445	158 aa		11.15	□□□□□ -0.62
CDKL3-208	ENST00000522501	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.15	□□□□□ -0.62
CDKL3-208	ENST00000522501	PNN	Q9H307	717 aa	Known RBP	11.15	□□□□□ -0.62
CDKL3-208	ENST00000522501	MYOZ2	Q9NPC6	264 aa		11.15	□□□□□ -0.62
CDKL3-208	ENST00000522501	GPR25	O00155	361 aa		11.14	□□□□□ -0.63
CDKL3-208	ENST00000522501	IRS4	O14654	1257 aa	Predicted RBP	11.14	□□□□□ -0.63
CDKL3-208	ENST00000522501	TM4SF4	P48230	202 aa		11.14	□□□□□ -0.63
CDKL3-208	ENST00000522501	RPS8	P62241	208 aa	Known RBP	11.14	□□□□□ -0.63
CDKL3-208	ENST00000522501	LMOD3	Q0VAK6	560 aa		11.14	□□□□□ -0.63
CDKL3-208	ENST00000522501	KRT24	Q2M2I5	525 aa		11.14	□□□□□ -0.63
CDKL3-208	ENST00000522501	MS4A4A	Q96JQ5	239 aa		11.14	□□□□□ -0.63
CDKL3-208	ENST00000522501	MRS2	Q9HD23	443 aa		11.14	□□□□□ -0.63
CDKL3-208	ENST00000522501	GGA1	Q9UJY5	639 aa		11.14	□□□□□ -0.63
CDKL3-208	ENST00000522501	TRIM35	Q9UPQ4	493 aa		11.14	□□□□□ -0.63
CDKL3-208	ENST00000522501	CEP290	O15078	2479 aa		11.13	□□□□□ -0.63
CDKL3-208	ENST00000522501	SSC5D	A1L4H1	1573 aa		11.13	□□□□□ -0.63
CDKL3-208	ENST00000522501	ATP5J2-PTCD1	G3V325	749 aa		11.13	□□□□□ -0.63
CDKL3-208	ENST00000522501	UBE2Q2L	H0YL09	131 aa		11.13	□□□□□ -0.63
CDKL3-208	ENST00000522501	ATMIN	O43313	823 aa	Predicted RBP	11.13	□□□□□ -0.63
CDKL3-208	ENST00000522501	PPP1R37	O75864	691 aa		11.13	□□□□□ -0.63
CDKL3-208	ENST00000522501	USP17L8	P0C7I0	530 aa		11.13	□□□□□ -0.63
CDKL3-208	ENST00000522501	RIPK4	P57078	832 aa		11.13	□□□□□ -0.63
CDKL3-208	ENST00000522501	SREBF2	Q12772	1141 aa		11.13	□□□□□ -0.63
CDKL3-208	ENST00000522501	SCAF8	Q9UPN6	1271 aa	Known RBP	11.13	□□□□□ -0.63
CDKL3-208	ENST00000522501	ZSWIM8	A7E2V4	1837 aa		11.13	□□□□□ -0.63
CDKL3-208	ENST00000522501	MED23	Q9ULK4	1368 aa		11.13	□□□□□ -0.63
CDKL3-208	ENST00000522501	XDH	P47989	1333 aa		11.12	□□□□□ -0.63
CDKL3-208	ENST00000522501	ZBED9	Q6R2W3	1325 aa		11.12	□□□□□ -0.63
CDKL3-208	ENST00000522501		G3V3G9	751 aa		11.12	□□□□□ -0.63
CDKL3-208	ENST00000522501	FKTN	O75072	461 aa		11.12	□□□□□ -0.63
CDKL3-208	ENST00000522501	HOXB7	P09629	217 aa		11.12	□□□□□ -0.63
CDKL3-208	ENST00000522501	TRIM28	Q13263	835 aa	Known RBP	11.12	□□□□□ -0.63
CDKL3-208	ENST00000522501	RTL5	Q5HYW3	569 aa	Predicted RBP	11.12	□□□□□ -0.63
CDKL3-208	ENST00000522501	HABP4	Q5JVS0	413 aa	Known RBP	11.12	□□□□□ -0.63
CDKL3-208	ENST00000522501	HDGFL1	Q5TGJ6	251 aa		11.12	□□□□□ -0.63
CDKL3-208	ENST00000522501	ANKRD13D	Q6ZTN6	518 aa		11.12	□□□□□ -0.63
CDKL3-208	ENST00000522501	SEC31B	Q9NQW1	1179 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms