RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 GLRX3O76003 335 aaKnown RBP15.98■□□□□ 0.15
CPNE3-205ENST00000522240 PI4K2BQ8TCG2 481 aa15.98■□□□□ 0.15
CPNE3-205ENST00000522240 CCDC8Q9H0W5 538 aaPredicted RBP15.98■□□□□ 0.15
CPNE3-205ENST00000522240 PPEF1O14829 653 aaPredicted RBP15.97■□□□□ 0.15
CPNE3-205ENST00000522240 SLC5A1P13866 664 aa15.97■□□□□ 0.15
CPNE3-205ENST00000522240 GSPT1P15170 499 aaKnown RBP15.97■□□□□ 0.15
CPNE3-205ENST00000522240 UBE4AQ14139 1066 aa15.97■□□□□ 0.15
CPNE3-205ENST00000522240 DBNDD2Q9BQY9 259 aa15.97■□□□□ 0.15
CPNE3-205ENST00000522240 BCL11AQ9H165 835 aa15.97■□□□□ 0.15
CPNE3-205ENST00000522240 XDHP47989 1333 aa15.96■□□□□ 0.15
CPNE3-205ENST00000522240 IFIT1P09914 478 aaKnown RBP15.96■□□□□ 0.15
CPNE3-205ENST00000522240 CNKSR1Q969H4 720 aa15.96■□□□□ 0.15
CPNE3-205ENST00000522240 ATP5JP18859 108 aa15.95■□□□□ 0.14
CPNE3-205ENST00000522240 TGFB2P61812 414 aa15.95■□□□□ 0.14
CPNE3-205ENST00000522240 TIMM10P62072 90 aa15.95■□□□□ 0.14
CPNE3-205ENST00000522240 TSHZ3Q63HK5 1081 aa15.95■□□□□ 0.14
CPNE3-205ENST00000522240 HELBQ8NG08 1087 aaPredicted RBP15.95■□□□□ 0.14
CPNE3-205ENST00000522240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.95■□□□□ 0.14
CPNE3-205ENST00000522240 XAGE2Q96GT9 111 aa15.95■□□□□ 0.14
CPNE3-205ENST00000522240 NEUROD6Q96NK8 337 aa15.95■□□□□ 0.14
CPNE3-205ENST00000522240 ATP6V0A2Q9Y487 856 aa15.95■□□□□ 0.14
CPNE3-205ENST00000522240 BRCA1P38398 1863 aaKnown RBP15.95■□□□□ 0.14
CPNE3-205ENST00000522240 AK9Q5TCS8 1911 aa15.94■□□□□ 0.14
CPNE3-205ENST00000522240 TAF5LO75529 589 aa15.94■□□□□ 0.14
CPNE3-205ENST00000522240 GPR162Q16538 588 aa15.94■□□□□ 0.14
CPNE3-205ENST00000522240 SP8Q8IXZ3 490 aa15.94■□□□□ 0.14
CPNE3-205ENST00000522240 ZNF512BQ96KM6 892 aaPredicted RBP15.94■□□□□ 0.14
CPNE3-205ENST00000522240 PODXL2Q9NZ53 605 aa15.94■□□□□ 0.14
CPNE3-205ENST00000522240 LEMD3Q9Y2U8 911 aa15.94■□□□□ 0.14
CPNE3-205ENST00000522240 DUOX1Q9NRD9 1551 aa15.93■□□□□ 0.14
CPNE3-205ENST00000522240 CHRNA5P30532 468 aa15.93■□□□□ 0.14
CPNE3-205ENST00000522240 ADORA1P30542 326 aa15.93■□□□□ 0.14
CPNE3-205ENST00000522240 C1QTNF8P60827 252 aa15.93■□□□□ 0.14
CPNE3-205ENST00000522240 CCDC158Q5M9N0 1113 aa15.93■□□□□ 0.14
CPNE3-205ENST00000522240 PRPF40BQ6NWY9 871 aaKnown RBP15.93■□□□□ 0.14
CPNE3-205ENST00000522240 ZNF622Q969S3 477 aaKnown RBP eCLIP15.93■□□□□ 0.14
CPNE3-205ENST00000522240 CD2APQ9Y5K6 639 aa15.93■□□□□ 0.14
CPNE3-205ENST00000522240 SLX4Q8IY92 1834 aa15.93■□□□□ 0.14
CPNE3-205ENST00000522240 ATP2B4P23634 1241 aa15.92■□□□□ 0.14
CPNE3-205ENST00000522240 ARID4AP29374 1257 aaPredicted RBP15.92■□□□□ 0.14
CPNE3-205ENST00000522240 KCNJ4P48050 445 aa15.92■□□□□ 0.14
CPNE3-205ENST00000522240 TTC39AQ5SRH9 613 aa15.92■□□□□ 0.14
CPNE3-205ENST00000522240 GORABQ5T7V8 394 aa15.92■□□□□ 0.14
CPNE3-205ENST00000522240 C15orf52Q6ZUT6 534 aaKnown RBP15.92■□□□□ 0.14
CPNE3-205ENST00000522240 SNED1Q8TER0 1413 aa15.92■□□□□ 0.14
CPNE3-205ENST00000522240 ZNF804BA4D1E1 1349 aa15.92■□□□□ 0.14
CPNE3-205ENST00000522240 IRS2Q9Y4H2 1338 aa15.92■□□□□ 0.14
CPNE3-205ENST00000522240 RFX7Q2KHR2 1363 aa15.91■□□□□ 0.14
CPNE3-205ENST00000522240 UQCRFS1P1P0C7P4 283 aa15.91■□□□□ 0.14
CPNE3-205ENST00000522240 SDSP20132 328 aa15.91■□□□□ 0.14
CPNE3-205ENST00000522240 CC2D2BQ6DHV5 1058 aa15.91■□□□□ 0.14
CPNE3-205ENST00000522240 CNTROBQ8N137 903 aa15.91■□□□□ 0.14
CPNE3-205ENST00000522240 TMX4Q9H1E5 349 aaPredicted RBP15.91■□□□□ 0.14
CPNE3-205ENST00000522240 ANKIB1Q9P2G1 1089 aa15.91■□□□□ 0.14
CPNE3-205ENST00000522240 AKAP11Q9UKA4 1901 aa15.9■□□□□ 0.14
CPNE3-205ENST00000522240 MED23Q9ULK4 1368 aa15.9■□□□□ 0.14
CPNE3-205ENST00000522240 SNAP23O00161 211 aa15.9■□□□□ 0.14
CPNE3-205ENST00000522240 GPSM2P81274 684 aa15.9■□□□□ 0.14
CPNE3-205ENST00000522240 C8orf34Q49A92 452 aa15.9■□□□□ 0.14
CPNE3-205ENST00000522240 CCDC102BQ68D86 513 aa15.9■□□□□ 0.14
CPNE3-205ENST00000522240 HAUS7Q99871 368 aa15.9■□□□□ 0.14
CPNE3-205ENST00000522240 GGA1Q9UJY5 639 aa15.9■□□□□ 0.14
CPNE3-205ENST00000522240 GRIN3BO60391 1043 aa15.89■□□□□ 0.13
CPNE3-205ENST00000522240 CDC45O75419 566 aa15.89■□□□□ 0.13
CPNE3-205ENST00000522240 DPEP1P16444 411 aa15.89■□□□□ 0.13
CPNE3-205ENST00000522240 KCNA3P22001 575 aa15.89■□□□□ 0.13
CPNE3-205ENST00000522240 GRIPAP1Q4V328 841 aa15.89■□□□□ 0.13
CPNE3-205ENST00000522240 TICAM2Q86XR7 235 aa15.89■□□□□ 0.13
CPNE3-205ENST00000522240 TTLL6Q8N841 843 aa15.89■□□□□ 0.13
CPNE3-205ENST00000522240 BOLA2Q9H3K6 86 aa15.89■□□□□ 0.13
CPNE3-205ENST00000522240 MYH13Q9UKX3 1938 aa15.89■□□□□ 0.13
CPNE3-205ENST00000522240 TRIM6-TRIM34B2RNG4 842 aa15.88■□□□□ 0.13
CPNE3-205ENST00000522240 UFL1O94874 794 aa15.88■□□□□ 0.13
CPNE3-205ENST00000522240 PHKA1P46020 1223 aa15.88■□□□□ 0.13
CPNE3-205ENST00000522240 CAVIN4Q5BKX8 364 aa15.88■□□□□ 0.13
CPNE3-205ENST00000522240 SLC51AQ86UW1 340 aa15.88■□□□□ 0.13
CPNE3-205ENST00000522240 C7orf43Q8WVR3 580 aa15.88■□□□□ 0.13
CPNE3-205ENST00000522240 EVI5LQ96CN4 794 aa15.88■□□□□ 0.13
CPNE3-205ENST00000522240 NSFL1CQ9UNZ2 370 aaKnown RBP15.88■□□□□ 0.13
CPNE3-205ENST00000522240 PDS5AQ29RF7 1337 aaKnown RBP15.88■□□□□ 0.13
CPNE3-205ENST00000522240 DOCK2Q92608 1830 aa15.87■□□□□ 0.13
CPNE3-205ENST00000522240 SEMA3EO15041 775 aa15.87■□□□□ 0.13
CPNE3-205ENST00000522240 FBXO33Q7Z6M2 555 aa15.87■□□□□ 0.13
CPNE3-205ENST00000522240 MPNDQ8N594 471 aa15.87■□□□□ 0.13
CPNE3-205ENST00000522240 TBC1D16Q8TBP0 767 aa15.87■□□□□ 0.13
CPNE3-205ENST00000522240 GNL3LQ9NVN8 582 aaKnown RBP15.87■□□□□ 0.13
CPNE3-205ENST00000522240 CEP350Q5VT06 3117 aa15.87■□□□□ 0.13
CPNE3-205ENST00000522240 A0A0G2JLW4 131 aa15.86■□□□□ 0.13
CPNE3-205ENST00000522240 MCAMP43121 646 aa15.86■□□□□ 0.13
CPNE3-205ENST00000522240 SOGA3Q5TF21 947 aa15.86■□□□□ 0.13
CPNE3-205ENST00000522240 CASC1Q6TDU7 716 aa15.86■□□□□ 0.13
CPNE3-205ENST00000522240 DPP8Q6V1X1 898 aaPredicted RBP15.86■□□□□ 0.13
CPNE3-205ENST00000522240 RILPL2Q969X0 211 aa15.86■□□□□ 0.13
CPNE3-205ENST00000522240 FAM84BQ96KN1 310 aaPredicted RBP15.86■□□□□ 0.13
CPNE3-205ENST00000522240 BACH2Q9BYV9 841 aa15.86■□□□□ 0.13
CPNE3-205ENST00000522240 PIM2Q9P1W9 311 aa15.86■□□□□ 0.13
CPNE3-205ENST00000522240 ARFGEF1Q9Y6D6 1849 aa15.86■□□□□ 0.13
CPNE3-205ENST00000522240 EIF5BO60841 1220 aaKnown RBP15.85■□□□□ 0.13
CPNE3-205ENST00000522240 KLRK1P26718 216 aa15.85■□□□□ 0.13
CPNE3-205ENST00000522240 HIBADHP31937 336 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms