RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 TTC24A2A3L6 582 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-216ENST00000521918 ESPNB1AK53 854 aa7.95□□□□□ -1.14
SPIDR-216ENST00000521918 J3QL48 77 aa7.95□□□□□ -1.14
SPIDR-216ENST00000521918 ZBTB7AO95365 584 aa7.95□□□□□ -1.14
SPIDR-216ENST00000521918 SEMA3FQ13275 785 aa7.95□□□□□ -1.14
SPIDR-216ENST00000521918 ITPK1Q13572 414 aa7.95□□□□□ -1.14
SPIDR-216ENST00000521918 CNGB1Q14028 1251 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-216ENST00000521918 ARID5BQ14865 1188 aa7.95□□□□□ -1.14
SPIDR-216ENST00000521918 NBPF20Q3BBV1 942 aa7.95□□□□□ -1.14
SPIDR-216ENST00000521918 AKAP4Q5JQC9 854 aa7.95□□□□□ -1.14
SPIDR-216ENST00000521918 VASH1Q7L8A9 365 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-216ENST00000521918 HOMEZQ8IX15 550 aa7.95□□□□□ -1.14
SPIDR-216ENST00000521918 LINC00116Q8NCU8 138 aa7.95□□□□□ -1.14
SPIDR-216ENST00000521918 ZNF592Q92610 1267 aa7.95□□□□□ -1.14
SPIDR-216ENST00000521918 KCTD15Q96SI1 283 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-216ENST00000521918 MTFR1LQ9H019 292 aa7.95□□□□□ -1.14
SPIDR-216ENST00000521918 ATG3Q9NT62 314 aa7.95□□□□□ -1.14
SPIDR-216ENST00000521918 SIPA1L3O60292 1781 aaPredicted RBP7.94□□□□□ -1.14
SPIDR-216ENST00000521918 UBR2Q8IWV8 1755 aa7.94□□□□□ -1.14
SPIDR-216ENST00000521918 LOC102724428A0A0B4J2F2 783 aa7.94□□□□□ -1.14
SPIDR-216ENST00000521918 FAM187AA6NFU0 413 aa7.94□□□□□ -1.14
SPIDR-216ENST00000521918 GIGYF1O75420 1035 aaPredicted RBP7.94□□□□□ -1.14
SPIDR-216ENST00000521918 ALDH1A1P00352 501 aa7.94□□□□□ -1.14
SPIDR-216ENST00000521918 SMPD1P17405 629 aa7.94□□□□□ -1.14
SPIDR-216ENST00000521918 SIK1P57059 783 aa7.94□□□□□ -1.14
SPIDR-216ENST00000521918 MTHFSDQ2M296 383 aaKnown RBP7.94□□□□□ -1.14
SPIDR-216ENST00000521918 C1orf141Q5JVX7 400 aa7.94□□□□□ -1.14
SPIDR-216ENST00000521918 PHTF2Q8N3S3 785 aa7.94□□□□□ -1.14
SPIDR-216ENST00000521918 UCN2Q96RP3 112 aa7.94□□□□□ -1.14
SPIDR-216ENST00000521918 MAP3K5Q99683 1374 aa7.94□□□□□ -1.14
SPIDR-216ENST00000521918 MYH14Q7Z406 1995 aaKnown RBP7.93□□□□□ -1.14
SPIDR-216ENST00000521918 RNMTO43148 476 aaKnown RBP7.93□□□□□ -1.14
SPIDR-216ENST00000521918 NR3C2P08235 984 aa7.93□□□□□ -1.14
SPIDR-216ENST00000521918 FSHRP23945 695 aa7.93□□□□□ -1.14
SPIDR-216ENST00000521918 SLC16A10Q8TF71 515 aa7.93□□□□□ -1.14
SPIDR-216ENST00000521918 SLC52A2Q9HAB3 445 aa7.93□□□□□ -1.14
SPIDR-216ENST00000521918 LGR6Q9HBX8 967 aa7.93□□□□□ -1.14
SPIDR-216ENST00000521918 CEMIPQ8WUJ3 1361 aa7.93□□□□□ -1.14
SPIDR-216ENST00000521918 U2SURPO15042 1029 aaKnown RBP7.92□□□□□ -1.14
SPIDR-216ENST00000521918 DGAT1O75907 488 aa7.92□□□□□ -1.14
SPIDR-216ENST00000521918 CABP4P57796 275 aa7.92□□□□□ -1.14
SPIDR-216ENST00000521918 NR5A1Q13285 461 aa7.92□□□□□ -1.14
SPIDR-216ENST00000521918 INTS6LQ5JSJ4 861 aaKnown RBP7.92□□□□□ -1.14
SPIDR-216ENST00000521918 COL23A1Q86Y22 540 aaPredicted RBP7.92□□□□□ -1.14
SPIDR-216ENST00000521918 NFATC2IPQ8NCF5 419 aa7.92□□□□□ -1.14
SPIDR-216ENST00000521918 PHACTR3Q96KR7 559 aa7.92□□□□□ -1.14
SPIDR-216ENST00000521918 CFAP53Q96M91 514 aa7.92□□□□□ -1.14
SPIDR-216ENST00000521918 TFCP2L1Q9NZI6 479 aa7.92□□□□□ -1.14
SPIDR-216ENST00000521918 C4AP0C0L4 1744 aa7.92□□□□□ -1.14
SPIDR-216ENST00000521918 PIK3CDO00329 1044 aa7.91□□□□□ -1.14
SPIDR-216ENST00000521918 SSFA2P28290 1259 aa7.91□□□□□ -1.14
SPIDR-216ENST00000521918 PRKAR2BP31323 418 aa7.91□□□□□ -1.14
SPIDR-216ENST00000521918 PKDCCQ504Y2 493 aa7.91□□□□□ -1.14
SPIDR-216ENST00000521918 CALR3Q96L12 384 aaKnown RBP7.91□□□□□ -1.14
SPIDR-216ENST00000521918 CNTNAP4Q9C0A0 1308 aa7.91□□□□□ -1.14
SPIDR-216ENST00000521918 HMGB2P26583 209 aaKnown RBP7.9□□□□□ -1.14
SPIDR-216ENST00000521918 DDX10Q13206 875 aaKnown RBP7.9□□□□□ -1.14
SPIDR-216ENST00000521918 NNTQ13423 1086 aa7.9□□□□□ -1.14
SPIDR-216ENST00000521918 RALBP1Q15311 655 aa7.9□□□□□ -1.14
SPIDR-216ENST00000521918 Q6ZNB5 142 aa7.9□□□□□ -1.14
SPIDR-216ENST00000521918 SMIM5Q71RC9 77 aa7.9□□□□□ -1.14
SPIDR-216ENST00000521918 IL17REQ8NFR9 667 aa7.9□□□□□ -1.14
SPIDR-216ENST00000521918 GAS2L2Q8NHY3 880 aa7.9□□□□□ -1.14
SPIDR-216ENST00000521918 KLF16Q9BXK1 252 aaPredicted RBP7.9□□□□□ -1.14
SPIDR-216ENST00000521918 WASF2Q9Y6W5 498 aa7.9□□□□□ -1.14
SPIDR-216ENST00000521918 GNAT3A8MTJ3 354 aa7.89□□□□□ -1.15
SPIDR-216ENST00000521918 U2AF1L5P0DN76 240 aaPredicted RBP7.89□□□□□ -1.15
SPIDR-216ENST00000521918 U2AF1Q01081 240 aaKnown RBP eCLIP7.89□□□□□ -1.15
SPIDR-216ENST00000521918 TSGA10IPQ3SY00 556 aa7.89□□□□□ -1.15
SPIDR-216ENST00000521918 FLAD1Q8NFF5 587 aa7.89□□□□□ -1.15
SPIDR-216ENST00000521918 HPS1Q92902 700 aa7.89□□□□□ -1.15
SPIDR-216ENST00000521918 CCDC85AQ96PX6 553 aaPredicted RBP7.89□□□□□ -1.15
SPIDR-216ENST00000521918 PLEKHF1Q96S99 279 aa7.89□□□□□ -1.15
SPIDR-216ENST00000521918 FHDC1Q9C0D6 1143 aaPredicted RBP7.89□□□□□ -1.15
SPIDR-216ENST00000521918 PPP1R1BQ9UD71 204 aaPredicted RBP7.89□□□□□ -1.15
SPIDR-216ENST00000521918 NUDCQ9Y266 331 aa7.89□□□□□ -1.15
SPIDR-216ENST00000521918 MYBBP1AQ9BQG0 1328 aaKnown RBP7.88□□□□□ -1.15
SPIDR-216ENST00000521918 ERVH48-1M5A8F1 160 aa7.88□□□□□ -1.15
SPIDR-216ENST00000521918 PTCD1O75127 700 aaKnown RBP7.88□□□□□ -1.15
SPIDR-216ENST00000521918 ZEB1P37275 1124 aaPredicted RBP7.88□□□□□ -1.15
SPIDR-216ENST00000521918 SLC39A6Q13433 755 aa7.88□□□□□ -1.15
SPIDR-216ENST00000521918 SLFNL1Q499Z3 407 aa7.88□□□□□ -1.15
SPIDR-216ENST00000521918 MSL1Q68DK7 614 aa7.88□□□□□ -1.15
SPIDR-216ENST00000521918 TBC1D9Q6ZT07 1266 aa7.88□□□□□ -1.15
SPIDR-216ENST00000521918 CCDC116Q8IYX3 515 aa7.88□□□□□ -1.15
SPIDR-216ENST00000521918 SYT17Q9BSW7 474 aa7.88□□□□□ -1.15
SPIDR-216ENST00000521918 DLG5Q8TDM6 1919 aa7.88□□□□□ -1.15
SPIDR-216ENST00000521918 KIAA1551Q9HCM1 1747 aa7.87□□□□□ -1.15
SPIDR-216ENST00000521918 AVPP01185 164 aa7.87□□□□□ -1.15
SPIDR-216ENST00000521918 CRKLP46109 303 aaKnown RBP7.87□□□□□ -1.15
SPIDR-216ENST00000521918 RAB15P59190 212 aa7.87□□□□□ -1.15
SPIDR-216ENST00000521918 PPP1R26Q5T8A7 1209 aaPredicted RBP7.87□□□□□ -1.15
SPIDR-216ENST00000521918 RNF20Q5VTR2 975 aa7.87□□□□□ -1.15
SPIDR-216ENST00000521918 TRAF7Q6Q0C0 670 aa7.87□□□□□ -1.15
SPIDR-216ENST00000521918 RNF135Q8IUD6 432 aa7.87□□□□□ -1.15
SPIDR-216ENST00000521918 PRKRIP1Q9H875 184 aaPredicted RBP7.87□□□□□ -1.15
SPIDR-216ENST00000521918 KIF13BQ9NQT8 1826 aa7.87□□□□□ -1.15
SPIDR-216ENST00000521918 RPS6KA4O75676 772 aa7.86□□□□□ -1.15
SPIDR-216ENST00000521918 CYP19A1P11511 503 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-216ENST00000521918 POLD1P28340 1107 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms