RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 PAPPA2Q9BXP8 1791 aa11.39□□□□□ -0.59
CTNNA1-229ENST00000521683 ASTN2O75129 1339 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 MYO3BQ8WXR4 1341 aa11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 FANCIQ9NVI1 1328 aa11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 ZNF646O15015 1829 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 SPEF2Q9C093 1822 aa11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 SLC10A3P09131 477 aa11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 IGHMBP2P38935 993 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 MMP14P50281 582 aa11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 CCT4P50991 539 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 SCARF1Q14162 830 aa11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 GCKRQ14397 625 aa11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 ANGEL2Q5VTE6 544 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 ZIC5Q96T25 663 aa11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 COA1Q9GZY4 146 aa11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 MYH16Q9H6N6 1097 aa11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 LEMD3Q9Y2U8 911 aa11.38□□□□□ -0.59
CTNNA1-229ENST00000521683 CSF1RP07333 972 aa11.37□□□□□ -0.59
CTNNA1-229ENST00000521683 ZNF157P51786 506 aaPredicted RBP11.37□□□□□ -0.59
CTNNA1-229ENST00000521683 CASP7P55210 303 aa11.37□□□□□ -0.59
CTNNA1-229ENST00000521683 DACT2Q5SW24 774 aa11.37□□□□□ -0.59
CTNNA1-229ENST00000521683 STRIP1Q5VSL9 837 aa11.37□□□□□ -0.59
CTNNA1-229ENST00000521683 LINS1Q8NG48 757 aa11.37□□□□□ -0.59
CTNNA1-229ENST00000521683 DNAAF4Q8WXU2 420 aa11.37□□□□□ -0.59
CTNNA1-229ENST00000521683 CASP8AP2Q9UKL3 1982 aa11.37□□□□□ -0.59
CTNNA1-229ENST00000521683 ITGA6P23229 1130 aa11.36□□□□□ -0.59
CTNNA1-229ENST00000521683 MAPK8IP2Q13387 824 aaPredicted RBP11.36□□□□□ -0.59
CTNNA1-229ENST00000521683 FKBP5Q13451 457 aaPredicted RBP11.36□□□□□ -0.59
CTNNA1-229ENST00000521683 WDR63Q8IWG1 891 aa11.36□□□□□ -0.59
CTNNA1-229ENST00000521683 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
CTNNA1-229ENST00000521683 MCOLN1Q9GZU1 580 aa11.36□□□□□ -0.59
CTNNA1-229ENST00000521683 ANKRD2Q9GZV1 360 aa11.36□□□□□ -0.59
CTNNA1-229ENST00000521683 WTIPA6NIX2 430 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-229ENST00000521683 VAMP4O75379 141 aa11.35□□□□□ -0.59
CTNNA1-229ENST00000521683 KIF23Q02241 960 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-229ENST00000521683 FAM161AQ3B820 660 aa11.35□□□□□ -0.59
CTNNA1-229ENST00000521683 RASAL3Q86YV0 1011 aa11.35□□□□□ -0.59
CTNNA1-229ENST00000521683 OGFOD1Q8N543 542 aa11.35□□□□□ -0.59
CTNNA1-229ENST00000521683 MRS2Q9HD23 443 aa11.35□□□□□ -0.59
CTNNA1-229ENST00000521683 ZNF804BA4D1E1 1349 aa11.35□□□□□ -0.59
CTNNA1-229ENST00000521683 NPM3O75607 178 aaKnown RBP11.34□□□□□ -0.59
CTNNA1-229ENST00000521683 RGS19P49795 217 aa11.34□□□□□ -0.59
CTNNA1-229ENST00000521683 TXNRD3Q86VQ6 643 aa11.34□□□□□ -0.59
CTNNA1-229ENST00000521683 MPHOSPH8Q99549 860 aa11.34□□□□□ -0.59
CTNNA1-229ENST00000521683 AKAP11Q9UKA4 1901 aa11.34□□□□□ -0.59
CTNNA1-229ENST00000521683 ANKRD18BA2A2Z9 1011 aa11.33□□□□□ -0.6
CTNNA1-229ENST00000521683 CCDC85CA6NKD9 419 aa11.33□□□□□ -0.6
CTNNA1-229ENST00000521683 WNT10BO00744 389 aa11.33□□□□□ -0.6
CTNNA1-229ENST00000521683 ANP32CO43423 234 aa11.33□□□□□ -0.6
CTNNA1-229ENST00000521683 CHRNDQ07001 517 aa11.33□□□□□ -0.6
CTNNA1-229ENST00000521683 DGKZQ13574 1117 aa11.33□□□□□ -0.6
CTNNA1-229ENST00000521683 NBPF9Q3BBW0 867 aa11.33□□□□□ -0.6
CTNNA1-229ENST00000521683 C15orf52Q6ZUT6 534 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-229ENST00000521683 CSRNP1Q96S65 589 aa11.33□□□□□ -0.6
CTNNA1-229ENST00000521683 RNF186Q9NXI6 227 aa11.33□□□□□ -0.6
CTNNA1-229ENST00000521683 IRS2Q9Y4H2 1338 aa11.33□□□□□ -0.6
CTNNA1-229ENST00000521683 COL1A1P02452 1464 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-229ENST00000521683 KLRK1P26718 216 aa11.32□□□□□ -0.6
CTNNA1-229ENST00000521683 NF2P35240 595 aa11.32□□□□□ -0.6
CTNNA1-229ENST00000521683 KCNJ4P48050 445 aa11.32□□□□□ -0.6
CTNNA1-229ENST00000521683 EXOSC9Q06265 439 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-229ENST00000521683 BEND3Q5T5X7 828 aa11.32□□□□□ -0.6
CTNNA1-229ENST00000521683 TTLL5Q6EMB2 1281 aa11.32□□□□□ -0.6
CTNNA1-229ENST00000521683 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
CTNNA1-229ENST00000521683 FBXW7Q969H0 707 aa11.32□□□□□ -0.6
CTNNA1-229ENST00000521683 MXD3Q9BW11 206 aa11.32□□□□□ -0.6
CTNNA1-229ENST00000521683 HDAC9Q9UKV0 1011 aa11.32□□□□□ -0.6
CTNNA1-229ENST00000521683 A0A1B0GUL6 1792 aa11.31□□□□□ -0.6
CTNNA1-229ENST00000521683 TRPA1O75762 1119 aa11.31□□□□□ -0.6
CTNNA1-229ENST00000521683 ZEB1P37275 1124 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-229ENST00000521683 FOXO4P98177 505 aa11.31□□□□□ -0.6
CTNNA1-229ENST00000521683 IFIT5Q13325 482 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-229ENST00000521683 APOBEC3FQ8IUX4 373 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-229ENST00000521683 ZBED3Q96IU2 234 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-229ENST00000521683 CD209Q9NNX6 404 aa11.31□□□□□ -0.6
CTNNA1-229ENST00000521683 F6X3S4 739 aa11.3□□□□□ -0.6
CTNNA1-229ENST00000521683 SASH1O94885 1247 aa11.3□□□□□ -0.6
CTNNA1-229ENST00000521683 GTF2IP78347 998 aa11.3□□□□□ -0.6
CTNNA1-229ENST00000521683 MLLT1Q03111 559 aaPredicted RBP11.3□□□□□ -0.6
CTNNA1-229ENST00000521683 MOB2Q70IA6 237 aa11.3□□□□□ -0.6
CTNNA1-229ENST00000521683 KIAA0825Q8IV33 1275 aa11.3□□□□□ -0.6
CTNNA1-229ENST00000521683 MTMR14Q8NCE2 650 aa11.3□□□□□ -0.6
CTNNA1-229ENST00000521683 UBE2Q2LH0YL09 131 aa11.29□□□□□ -0.6
CTNNA1-229ENST00000521683 GRM8O00222 908 aa11.29□□□□□ -0.6
CTNNA1-229ENST00000521683 ALDH1L1O75891 902 aa11.29□□□□□ -0.6
CTNNA1-229ENST00000521683 IL1R1P14778 569 aa11.29□□□□□ -0.6
CTNNA1-229ENST00000521683 FKBP1AP62942 108 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-229ENST00000521683 ZNF804AQ7Z570 1209 aa11.29□□□□□ -0.6
CTNNA1-229ENST00000521683 SPINK5Q9NQ38 1064 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-229ENST00000521683 SCAF8Q9UPN6 1271 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-229ENST00000521683 SALL2Q9Y467 1007 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-229ENST00000521683 PDE4DIPQ5VU43 2346 aa11.29□□□□□ -0.6
CTNNA1-229ENST00000521683 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-229ENST00000521683 TTLL12Q14166 644 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-229ENST00000521683 CCDC57Q2TAC2 916 aa11.28□□□□□ -0.6
CTNNA1-229ENST00000521683 NOM1Q5C9Z4 860 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-229ENST00000521683 PRAMEF18Q5VWM3 479 aa11.28□□□□□ -0.6
CTNNA1-229ENST00000521683 LMBR1LQ6UX01 489 aa11.28□□□□□ -0.6
CTNNA1-229ENST00000521683 ARMC9Q7Z3E5 817 aa11.28□□□□□ -0.6
CTNNA1-229ENST00000521683 CTU1Q7Z7A3 348 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms