RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-205	ENST00000521589	PTPRC	P08575	1304 aa		11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	ZNF646	O15015	1829 aa	Predicted RBP	11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	USP17L8	P0C7I0	530 aa		11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	MMP14	P50281	582 aa		11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	MAP2K1	Q02750	393 aa	Predicted RBP	11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	CHRND	Q07001	517 aa		11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	STRIP1	Q5VSL9	837 aa		11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	LMBR1L	Q6UX01	489 aa		11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	KRT26	Q7Z3Y9	468 aa		11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	USP48	Q86UV5	1035 aa		11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	TXNRD3	Q86VQ6	643 aa		11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	TRMT2A	Q8IZ69	625 aa	Known RBP	11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	MRPL50	Q8N5N7	158 aa	Known RBP	11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	SRCIN1	Q9C0H9	1055 aa		11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	PRDM10	Q9NQV6	1147 aa		11.12	□□□□□ -0.63
NPIPB3-205	ENST00000521589	MYO3B	Q8WXR4	1341 aa		11.11	□□□□□ -0.63
NPIPB3-205	ENST00000521589	PITPNM2	Q9BZ72	1349 aa		11.11	□□□□□ -0.63
NPIPB3-205	ENST00000521589	KLRK1	P26718	216 aa		11.11	□□□□□ -0.63
NPIPB3-205	ENST00000521589	MAP2K2	P36507	400 aa		11.11	□□□□□ -0.63
NPIPB3-205	ENST00000521589	CTCF	P49711	727 aa	Predicted RBP	11.11	□□□□□ -0.63
NPIPB3-205	ENST00000521589	CYP4F22	Q6NT55	531 aa		11.11	□□□□□ -0.63
NPIPB3-205	ENST00000521589	SLC4A10	Q6U841	1118 aa		11.11	□□□□□ -0.63
NPIPB3-205	ENST00000521589	SSH1	Q8WYL5	1049 aa		11.11	□□□□□ -0.63
NPIPB3-205	ENST00000521589	AIDA	Q96BJ3	306 aa		11.11	□□□□□ -0.63
NPIPB3-205	ENST00000521589	DCPS	Q96C86	337 aa	Known RBP	11.11	□□□□□ -0.63
NPIPB3-205	ENST00000521589	GGA3	Q9NZ52	723 aa		11.11	□□□□□ -0.63
NPIPB3-205	ENST00000521589	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.11	□□□□□ -0.63
NPIPB3-205	ENST00000521589	CCDC57	Q2TAC2	916 aa		11.1	□□□□□ -0.63
NPIPB3-205	ENST00000521589	ALDH1L2	Q3SY69	923 aa		11.1	□□□□□ -0.63
NPIPB3-205	ENST00000521589	RABL6	Q3YEC7	729 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPB3-205	ENST00000521589	RBM26	Q5T8P6	1007 aa	Known RBP	11.1	□□□□□ -0.63
NPIPB3-205	ENST00000521589	SULF1	Q8IWU6	871 aa		11.1	□□□□□ -0.63
NPIPB3-205	ENST00000521589	KAZALD1	Q96I82	304 aa		11.1	□□□□□ -0.63
NPIPB3-205	ENST00000521589	MYOZ2	Q9NPC6	264 aa		11.1	□□□□□ -0.63
NPIPB3-205	ENST00000521589		A0A1B0GUL6	1792 aa		11.1	□□□□□ -0.63
NPIPB3-205	ENST00000521589	ASTN2	O75129	1339 aa	Predicted RBP	11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	POLR2A	P24928	1970 aa	Known RBP	11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	ADM5	C9JUS6	153 aa		11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	CT47B1	P0C2W7	299 aa	Predicted RBP	11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	KCNJ4	P48050	445 aa		11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	SCARF1	Q14162	830 aa		11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	DLK2	Q6UY11	383 aa		11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	TNS4	Q8IZW8	715 aa		11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	CDCA7L	Q96GN5	454 aa		11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	SUCLG2	Q96I99	432 aa		11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	ZNF408	Q9H9D4	720 aa		11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	CD209	Q9NNX6	404 aa		11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	CHMP3	Q9Y3E7	222 aa		11.09	□□□□□ -0.63
NPIPB3-205	ENST00000521589	SNAP23	O00161	211 aa		11.08	□□□□□ -0.64
NPIPB3-205	ENST00000521589	HSPA8	P11142	646 aa	Known RBP	11.08	□□□□□ -0.64
NPIPB3-205	ENST00000521589	HUNK	P57058	714 aa		11.08	□□□□□ -0.64
NPIPB3-205	ENST00000521589	ANGEL2	Q5VTE6	544 aa	Known RBP	11.08	□□□□□ -0.64
NPIPB3-205	ENST00000521589	TTLL5	Q6EMB2	1281 aa		11.08	□□□□□ -0.64
NPIPB3-205	ENST00000521589	LDHAL6A	Q6ZMR3	332 aa		11.08	□□□□□ -0.64
NPIPB3-205	ENST00000521589	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.08	□□□□□ -0.64
NPIPB3-205	ENST00000521589	OGFOD1	Q8N543	542 aa		11.08	□□□□□ -0.64
NPIPB3-205	ENST00000521589	MXD3	Q9BW11	206 aa		11.08	□□□□□ -0.64
NPIPB3-205	ENST00000521589	GBA2	Q9HCG7	927 aa	Predicted RBP	11.08	□□□□□ -0.64
NPIPB3-205	ENST00000521589	WNT10B	O00744	389 aa		11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	AOC2	O75106	756 aa		11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	TAF5L	O75529	589 aa		11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	IL1R1	P14778	569 aa		11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	BRPF1	P55201	1214 aa	Predicted RBP	11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	FKBP1A	P62942	108 aa	Known RBP	11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	NOG	Q13253	232 aa		11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	TAF7L	Q5H9L4	462 aa		11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	ANKRD44	Q8N8A2	993 aa		11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	C2orf69	Q8N8R5	385 aa		11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	HELB	Q8NG08	1087 aa	Predicted RBP	11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	CDCA5	Q96FF9	252 aa		11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	ZBED3	Q96IU2	234 aa	Predicted RBP	11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	ZNF594	Q96JF6	807 aa	Predicted RBP	11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	BICC1	Q9H694	974 aa	Known RBP	11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	CNNM1	Q9NRU3	951 aa		11.07	□□□□□ -0.64
NPIPB3-205	ENST00000521589	FAM155A	B1AL88	458 aa	Predicted RBP	11.06	□□□□□ -0.64
NPIPB3-205	ENST00000521589	CA12	O43570	354 aa		11.06	□□□□□ -0.64
NPIPB3-205	ENST00000521589	LBX1	P52954	281 aa		11.06	□□□□□ -0.64
NPIPB3-205	ENST00000521589	FKBP1B	P68106	108 aa		11.06	□□□□□ -0.64
NPIPB3-205	ENST00000521589	GTF2I	P78347	998 aa		11.06	□□□□□ -0.64
NPIPB3-205	ENST00000521589	UBE4A	Q14139	1066 aa		11.06	□□□□□ -0.64
NPIPB3-205	ENST00000521589	NBPF9	Q3BBW0	867 aa		11.06	□□□□□ -0.64
NPIPB3-205	ENST00000521589	ZNF804A	Q7Z570	1209 aa		11.06	□□□□□ -0.64
NPIPB3-205	ENST00000521589	USP44	Q9H0E7	712 aa		11.06	□□□□□ -0.64
NPIPB3-205	ENST00000521589	RIPOR2	Q9Y4F9	1068 aa		11.06	□□□□□ -0.64
NPIPB3-205	ENST00000521589	GRM1	Q13255	1194 aa		11.05	□□□□□ -0.64
NPIPB3-205	ENST00000521589	RGMB	Q6NW40	437 aa		11.05	□□□□□ -0.64
NPIPB3-205	ENST00000521589	KIAA0825	Q8IV33	1275 aa		11.05	□□□□□ -0.64
NPIPB3-205	ENST00000521589	CERS5	Q8N5B7	392 aa		11.05	□□□□□ -0.64
NPIPB3-205	ENST00000521589	MTMR14	Q8NCE2	650 aa		11.05	□□□□□ -0.64
NPIPB3-205	ENST00000521589	FBXW7	Q969H0	707 aa		11.05	□□□□□ -0.64
NPIPB3-205	ENST00000521589	CCDC102A	Q96A19	550 aa		11.05	□□□□□ -0.64
NPIPB3-205	ENST00000521589	BEGAIN	Q9BUH8	593 aa		11.05	□□□□□ -0.64
NPIPB3-205	ENST00000521589	SMC4	Q9NTJ3	1288 aa		11.05	□□□□□ -0.64
NPIPB3-205	ENST00000521589	HDAC9	Q9UKV0	1011 aa		11.05	□□□□□ -0.64
NPIPB3-205	ENST00000521589	PAPPA2	Q9BXP8	1791 aa		11.05	□□□□□ -0.64
NPIPB3-205	ENST00000521589	FAM205A	Q6ZU69	1335 aa		11.05	□□□□□ -0.64
NPIPB3-205	ENST00000521589	MROH5	Q6ZUA9	1318 aa		11.05	□□□□□ -0.64
NPIPB3-205	ENST00000521589	PUS3	Q9BZE2	481 aa	Known RBP	11.04	□□□□□ -0.64
NPIPB3-205	ENST00000521589	SASH1	O94885	1247 aa		11.03	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms