RNA–Protein interactions for RNA: ENST00000521562.5

PTK2-233, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-233	ENST00000521562	BRPF1	P55201	1214 aa	Predicted RBP	12.02	□□□□□ -0.49
PTK2-233	ENST00000521562	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.02	□□□□□ -0.49
PTK2-233	ENST00000521562	DLK2	Q6UY11	383 aa		12.02	□□□□□ -0.49
PTK2-233	ENST00000521562	LDHAL6A	Q6ZMR3	332 aa		12.02	□□□□□ -0.49
PTK2-233	ENST00000521562	PODN	Q7Z5L7	613 aa		12.02	□□□□□ -0.49
PTK2-233	ENST00000521562	PUS3	Q9BZE2	481 aa	Known RBP	12.02	□□□□□ -0.49
PTK2-233	ENST00000521562	USP17L3	A6NCW0	530 aa		12.01	□□□□□ -0.49
PTK2-233	ENST00000521562	USP17L4	A6NCW7	530 aa		12.01	□□□□□ -0.49
PTK2-233	ENST00000521562	PLIN1	O60240	522 aa		12.01	□□□□□ -0.49
PTK2-233	ENST00000521562	KCNJ4	P48050	445 aa		12.01	□□□□□ -0.49
PTK2-233	ENST00000521562	RABL6	Q3YEC7	729 aa	Predicted RBP	12.01	□□□□□ -0.49
PTK2-233	ENST00000521562	TAF7L	Q5H9L4	462 aa		12.01	□□□□□ -0.49
PTK2-233	ENST00000521562	RBM26	Q5T8P6	1007 aa	Known RBP	12.01	□□□□□ -0.49
PTK2-233	ENST00000521562	CST9	Q5W186	159 aa		12.01	□□□□□ -0.49
PTK2-233	ENST00000521562	USP17L1	Q7RTZ2	530 aa		12.01	□□□□□ -0.49
PTK2-233	ENST00000521562	GML	Q99445	158 aa		12.01	□□□□□ -0.49
PTK2-233	ENST00000521562	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.01	□□□□□ -0.49
PTK2-233	ENST00000521562	CNNM1	Q9NRU3	951 aa		12.01	□□□□□ -0.49
PTK2-233	ENST00000521562	ZNF609	O15014	1411 aa		12.01	□□□□□ -0.49
PTK2-233	ENST00000521562	BCAR3	O75815	825 aa		12	□□□□□ -0.49
PTK2-233	ENST00000521562	DACT2	Q5SW24	774 aa		12	□□□□□ -0.49
PTK2-233	ENST00000521562	KLHDC4	Q8TBB5	520 aa		12	□□□□□ -0.49
PTK2-233	ENST00000521562	ZC3H15	Q8WU90	426 aa	Known RBP	12	□□□□□ -0.49
PTK2-233	ENST00000521562	FBXW7	Q969H0	707 aa		12	□□□□□ -0.49
PTK2-233	ENST00000521562	COA1	Q9GZY4	146 aa		12	□□□□□ -0.49
PTK2-233	ENST00000521562	TNN	Q9UQP3	1299 aa		12	□□□□□ -0.49
PTK2-233	ENST00000521562	ASTN2	O75129	1339 aa	Predicted RBP	12	□□□□□ -0.49
PTK2-233	ENST00000521562	CNTNAP1	P78357	1384 aa		12	□□□□□ -0.49
PTK2-233	ENST00000521562	ZNF280A	P59817	542 aa	Predicted RBP	11.99	□□□□□ -0.49
PTK2-233	ENST00000521562	KIF4B	Q2VIQ3	1234 aa		11.99	□□□□□ -0.49
PTK2-233	ENST00000521562	LRRC24	Q50LG9	513 aa		11.99	□□□□□ -0.49
PTK2-233	ENST00000521562	USP48	Q86UV5	1035 aa		11.99	□□□□□ -0.49
PTK2-233	ENST00000521562	AGBL3	Q8NEM8	1001 aa		11.99	□□□□□ -0.49
PTK2-233	ENST00000521562	API5	Q9BZZ5	524 aa	Known RBP	11.99	□□□□□ -0.49
PTK2-233	ENST00000521562	CD209	Q9NNX6	404 aa		11.99	□□□□□ -0.49
PTK2-233	ENST00000521562	RIPOR2	Q9Y4F9	1068 aa		11.99	□□□□□ -0.49
PTK2-233	ENST00000521562	STRIP1	Q5VSL9	837 aa		11.98	□□□□□ -0.49
PTK2-233	ENST00000521562	C15orf52	Q6ZUT6	534 aa	Known RBP	11.98	□□□□□ -0.49
PTK2-233	ENST00000521562	ADM5	C9JUS6	153 aa		11.97	□□□□□ -0.49
PTK2-233	ENST00000521562	CELF2	O95319	508 aa	Known RBP	11.97	□□□□□ -0.49
PTK2-233	ENST00000521562	USP17L8	P0C7I0	530 aa		11.97	□□□□□ -0.49
PTK2-233	ENST00000521562	RFX5	P48382	616 aa	Predicted RBP	11.97	□□□□□ -0.49
PTK2-233	ENST00000521562	VEGFB	P49765	207 aa		11.97	□□□□□ -0.49
PTK2-233	ENST00000521562	GTF2I	P78347	998 aa		11.97	□□□□□ -0.49
PTK2-233	ENST00000521562	TTLL5	Q6EMB2	1281 aa		11.97	□□□□□ -0.49
PTK2-233	ENST00000521562	CDC37L1	Q7L3B6	337 aa		11.97	□□□□□ -0.49
PTK2-233	ENST00000521562	MYOZ2	Q9NPC6	264 aa		11.97	□□□□□ -0.49
PTK2-233	ENST00000521562	ABT1	Q9ULW3	272 aa	Known RBP	11.97	□□□□□ -0.49
PTK2-233	ENST00000521562	KIF16B	Q96L93	1317 aa		11.96	□□□□□ -0.49
PTK2-233	ENST00000521562	RASSF10	A6NK89	507 aa		11.96	□□□□□ -0.49
PTK2-233	ENST00000521562	IL1R1	P14778	569 aa		11.96	□□□□□ -0.49
PTK2-233	ENST00000521562	SCARF1	Q14162	830 aa		11.96	□□□□□ -0.49
PTK2-233	ENST00000521562	CERS5	Q8N5B7	392 aa		11.96	□□□□□ -0.49
PTK2-233	ENST00000521562	ARHGAP45	Q92619	1136 aa		11.96	□□□□□ -0.49
PTK2-233	ENST00000521562	MEIS3	Q99687	375 aa		11.96	□□□□□ -0.49
PTK2-233	ENST00000521562	ZNF408	Q9H9D4	720 aa		11.96	□□□□□ -0.49
PTK2-233	ENST00000521562	GGA3	Q9NZ52	723 aa		11.96	□□□□□ -0.49
PTK2-233	ENST00000521562	SCAF8	Q9UPN6	1271 aa	Known RBP	11.96	□□□□□ -0.49
PTK2-233	ENST00000521562	JAG2	Q9Y219	1238 aa		11.96	□□□□□ -0.49
PTK2-233	ENST00000521562	ZBED9	Q6R2W3	1325 aa		11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	MROH5	Q6ZUA9	1318 aa		11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	UBTFL1	P0CB47	393 aa	Predicted RBP	11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	TRIM27	P14373	513 aa		11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	GYG1	P46976	350 aa		11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	PTPN12	Q05209	780 aa	Known RBP	11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	UBE4A	Q14139	1066 aa		11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	DEFB115	Q30KQ5	88 aa		11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	NBPF9	Q3BBW0	867 aa		11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	METTL24	Q5JXM2	366 aa		11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	ANGEL2	Q5VTE6	544 aa	Known RBP	11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	INTS3	Q68E01	1043 aa	Known RBP	11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	KRT26	Q7Z3Y9	468 aa		11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	VGLL2	Q8N8G2	317 aa		11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	FRAT1	Q92837	279 aa	Predicted RBP	11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	LRRFIP2	Q9Y608	721 aa	Known RBP	11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	TLL2	Q9Y6L7	1015 aa		11.95	□□□□□ -0.5
PTK2-233	ENST00000521562	MYO3B	Q8WXR4	1341 aa		11.94	□□□□□ -0.5
PTK2-233	ENST00000521562	HSPA1A	P0DMV8	641 aa	Known RBP	11.94	□□□□□ -0.5
PTK2-233	ENST00000521562	HSPA1B	P0DMV9	641 aa	Known RBP	11.94	□□□□□ -0.5
PTK2-233	ENST00000521562	CYP4F22	Q6NT55	531 aa		11.94	□□□□□ -0.5
PTK2-233	ENST00000521562	ATF7IP	Q6VMQ6	1270 aa		11.94	□□□□□ -0.5
PTK2-233	ENST00000521562	ZNF804A	Q7Z570	1209 aa		11.94	□□□□□ -0.5
PTK2-233	ENST00000521562	KIAA0825	Q8IV33	1275 aa		11.94	□□□□□ -0.5
PTK2-233	ENST00000521562	CLUAP1	Q96AJ1	413 aa		11.94	□□□□□ -0.5
PTK2-233	ENST00000521562	DCPS	Q96C86	337 aa	Known RBP	11.94	□□□□□ -0.5
PTK2-233	ENST00000521562	FAM84B	Q96KN1	310 aa	Predicted RBP	11.94	□□□□□ -0.5
PTK2-233	ENST00000521562	THSD7B	Q9C0I4	1608 aa		11.93	□□□□□ -0.5
PTK2-233	ENST00000521562	WDR33	Q9C0J8	1336 aa	Known RBP	11.93	□□□□□ -0.5
PTK2-233	ENST00000521562	SASH1	O94885	1247 aa		11.93	□□□□□ -0.5
PTK2-233	ENST00000521562	HIBADH	P31937	336 aa	Known RBP	11.93	□□□□□ -0.5
PTK2-233	ENST00000521562	ATG9A	Q7Z3C6	839 aa		11.93	□□□□□ -0.5
PTK2-233	ENST00000521562	SAPCD2	Q86UD0	394 aa		11.93	□□□□□ -0.5
PTK2-233	ENST00000521562	SIL1	Q9H173	461 aa		11.93	□□□□□ -0.5
PTK2-233	ENST00000521562	PCDHAC2	Q9Y5I4	1007 aa		11.93	□□□□□ -0.5
PTK2-233	ENST00000521562	ARAP2	Q8WZ64	1704 aa		11.93	□□□□□ -0.5
PTK2-233	ENST00000521562	EYA2	O00167	538 aa		11.92	□□□□□ -0.5
PTK2-233	ENST00000521562	WNT10B	O00744	389 aa		11.92	□□□□□ -0.5
PTK2-233	ENST00000521562	IPO8	O15397	1037 aa	Known RBP	11.92	□□□□□ -0.5
PTK2-233	ENST00000521562	PDE8B	O95263	885 aa		11.92	□□□□□ -0.5
PTK2-233	ENST00000521562	GRM1	Q13255	1194 aa		11.92	□□□□□ -0.5

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