RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 GNAI3P08754 354 aa25.85■■□□□ 1.73
TRIM35-203ENST00000521253 RPS12P25398 132 aaKnown RBP25.85■■□□□ 1.73
TRIM35-203ENST00000521253 RFX5P48382 616 aaPredicted RBP25.85■■□□□ 1.73
TRIM35-203ENST00000521253 LRRC24Q50LG9 513 aa25.85■■□□□ 1.73
TRIM35-203ENST00000521253 C15orf52Q6ZUT6 534 aaKnown RBP25.85■■□□□ 1.73
TRIM35-203ENST00000521253 MICALL2Q8IY33 904 aa25.85■■□□□ 1.73
TRIM35-203ENST00000521253 TMEM57Q8N5G2 664 aa25.85■■□□□ 1.73
TRIM35-203ENST00000521253 USP17L3A6NCW0 530 aa25.84■■□□□ 1.73
TRIM35-203ENST00000521253 USP17L4A6NCW7 530 aa25.84■■□□□ 1.73
TRIM35-203ENST00000521253 MAP1SQ66K74 1059 aaPredicted RBP25.84■■□□□ 1.73
TRIM35-203ENST00000521253 USP17L1Q7RTZ2 530 aa25.84■■□□□ 1.73
TRIM35-203ENST00000521253 MROH5Q6ZUA9 1318 aa25.84■■□□□ 1.73
TRIM35-203ENST00000521253 H7C1D1 291 aa25.83■■□□□ 1.73
TRIM35-203ENST00000521253 RSBN1LQ6PCB5 846 aaPredicted RBP25.83■■□□□ 1.73
TRIM35-203ENST00000521253 A0A1B0GUL6 1792 aa25.82■■□□□ 1.72
TRIM35-203ENST00000521253 PTPN12Q05209 780 aaKnown RBP25.82■■□□□ 1.72
TRIM35-203ENST00000521253 TRPM4Q8TD43 1214 aa25.82■■□□□ 1.72
TRIM35-203ENST00000521253 ITGBL1O95965 494 aaPredicted RBP25.81■■□□□ 1.72
TRIM35-203ENST00000521253 HIRAP54198 1017 aaPredicted RBP25.81■■□□□ 1.72
TRIM35-203ENST00000521253 HTRA3P83110 453 aa25.81■■□□□ 1.72
TRIM35-203ENST00000521253 UBE4AQ14139 1066 aa25.81■■□□□ 1.72
TRIM35-203ENST00000521253 METTL24Q5JXM2 366 aa25.81■■□□□ 1.72
TRIM35-203ENST00000521253 FTSJ3Q8IY81 847 aaKnown RBP25.81■■□□□ 1.72
TRIM35-203ENST00000521253 CNTROBQ8N137 903 aa25.81■■□□□ 1.72
TRIM35-203ENST00000521253 CD209Q9NNX6 404 aa25.81■■□□□ 1.72
TRIM35-203ENST00000521253 RLBP1P12271 317 aa25.8■■□□□ 1.72
TRIM35-203ENST00000521253 DACT2Q5SW24 774 aa25.8■■□□□ 1.72
TRIM35-203ENST00000521253 DZIP1LQ8IYY4 767 aaKnown RBP25.8■■□□□ 1.72
TRIM35-203ENST00000521253 AGBL3Q8NEM8 1001 aa25.8■■□□□ 1.72
TRIM35-203ENST00000521253 PASKQ96RG2 1323 aa25.8■■□□□ 1.72
TRIM35-203ENST00000521253 ZNF609O15014 1411 aa25.8■■□□□ 1.72
TRIM35-203ENST00000521253 STRIP1Q5VSL9 837 aa25.79■■□□□ 1.72
TRIM35-203ENST00000521253 SAMD7Q7Z3H4 446 aa25.79■■□□□ 1.72
TRIM35-203ENST00000521253 VGLL2Q8N8G2 317 aa25.79■■□□□ 1.72
TRIM35-203ENST00000521253 FBXW7Q969H0 707 aa25.79■■□□□ 1.72
TRIM35-203ENST00000521253 GMLQ99445 158 aa25.79■■□□□ 1.72
TRIM35-203ENST00000521253 EYA2O00167 538 aa25.78■■□□□ 1.72
TRIM35-203ENST00000521253 EGFRP00533 1210 aa25.78■■□□□ 1.72
TRIM35-203ENST00000521253 ZNF804AQ7Z570 1209 aa25.78■■□□□ 1.72
TRIM35-203ENST00000521253 MXD3Q9BW11 206 aa25.78■■□□□ 1.72
TRIM35-203ENST00000521253 PDE8BO95263 885 aa25.77■■□□□ 1.72
TRIM35-203ENST00000521253 GNAI2P04899 355 aa25.77■■□□□ 1.72
TRIM35-203ENST00000521253 TBC1D10BQ4KMP7 808 aaPredicted RBP25.77■■□□□ 1.72
TRIM35-203ENST00000521253 TTLL5Q6EMB2 1281 aa25.77■■□□□ 1.72
TRIM35-203ENST00000521253 IL1R1P14778 569 aa25.76■■□□□ 1.71
TRIM35-203ENST00000521253 GTF2IP78347 998 aa25.76■■□□□ 1.71
TRIM35-203ENST00000521253 ATG9AQ7Z3C6 839 aa25.76■■□□□ 1.71
TRIM35-203ENST00000521253 SIL1Q9H173 461 aa25.76■■□□□ 1.71
TRIM35-203ENST00000521253 PGAP2Q9UHJ9 254 aa25.76■■□□□ 1.71
TRIM35-203ENST00000521253 RCAN3Q9UKA8 241 aa25.76■■□□□ 1.71
TRIM35-203ENST00000521253 PSME4Q14997 1843 aa25.76■■□□□ 1.71
TRIM35-203ENST00000521253 ZNF280AP59817 542 aaPredicted RBP25.75■■□□□ 1.71
TRIM35-203ENST00000521253 MTX1Q13505 466 aa25.75■■□□□ 1.71
TRIM35-203ENST00000521253 RBM26Q5T8P6 1007 aaKnown RBP25.75■■□□□ 1.71
TRIM35-203ENST00000521253 ITPRIPQ8IWB1 547 aa25.75■■□□□ 1.71
TRIM35-203ENST00000521253 ZC3H15Q8WU90 426 aaKnown RBP25.75■■□□□ 1.71
TRIM35-203ENST00000521253 FBXO3Q9UK99 471 aa25.75■■□□□ 1.71
TRIM35-203ENST00000521253 PA2G4Q9UQ80 394 aaKnown RBP25.75■■□□□ 1.71
TRIM35-203ENST00000521253 SRGAP3O43295 1099 aa25.74■■□□□ 1.71
TRIM35-203ENST00000521253 USP17L8P0C7I0 530 aa25.74■■□□□ 1.71
TRIM35-203ENST00000521253 GYG1P46976 350 aa25.74■■□□□ 1.71
TRIM35-203ENST00000521253 COPRSQ9NQ92 184 aa25.74■■□□□ 1.71
TRIM35-203ENST00000521253 MYO3BQ8WXR4 1341 aa25.73■■□□□ 1.71
TRIM35-203ENST00000521253 CIAO1O76071 339 aa25.73■■□□□ 1.71
TRIM35-203ENST00000521253 KIF4BQ2VIQ3 1234 aa25.73■■□□□ 1.71
TRIM35-203ENST00000521253 DNAJC5GQ8N7S2 189 aa25.73■■□□□ 1.71
TRIM35-203ENST00000521253 PANK1Q8TE04 598 aa25.73■■□□□ 1.71
TRIM35-203ENST00000521253 FAM84BQ96KN1 310 aaPredicted RBP25.73■■□□□ 1.71
TRIM35-203ENST00000521253 HIBADHP31937 336 aaKnown RBP25.72■■□□□ 1.71
TRIM35-203ENST00000521253 PUM3Q15397 648 aaKnown RBP25.72■■□□□ 1.71
TRIM35-203ENST00000521253 FGFR2P21802 821 aa25.71■■□□□ 1.71
TRIM35-203ENST00000521253 ZNF646O15015 1829 aaPredicted RBP25.7■■□□□ 1.71
TRIM35-203ENST00000521253 TRAF5O00463 557 aa25.7■■□□□ 1.7
TRIM35-203ENST00000521253 ZBTB7BO15156 539 aaPredicted RBP25.7■■□□□ 1.7
TRIM35-203ENST00000521253 IL15P40933 162 aaPredicted RBP25.7■■□□□ 1.7
TRIM35-203ENST00000521253 FMR1Q06787 632 aaKnown RBP eCLIP25.7■■□□□ 1.7
TRIM35-203ENST00000521253 FBXO33Q7Z6M2 555 aa25.7■■□□□ 1.7
TRIM35-203ENST00000521253 TDRD7Q8NHU6 1098 aaKnown RBP25.7■■□□□ 1.7
TRIM35-203ENST00000521253 GLIS2Q9BZE0 524 aaPredicted RBP25.7■■□□□ 1.7
TRIM35-203ENST00000521253 MYOZ2Q9NPC6 264 aa25.7■■□□□ 1.7
TRIM35-203ENST00000521253 CREBZFQ9NS37 354 aa25.7■■□□□ 1.7
TRIM35-203ENST00000521253 JAG2Q9Y219 1238 aa25.7■■□□□ 1.7
TRIM35-203ENST00000521253 SASH1O94885 1247 aa25.69■■□□□ 1.7
TRIM35-203ENST00000521253 CERS5Q8N5B7 392 aa25.69■■□□□ 1.7
TRIM35-203ENST00000521253 PNMA6EA0A0J9YXQ4 647 aa25.68■■□□□ 1.7
TRIM35-203ENST00000521253 IFIT1P09914 478 aaKnown RBP25.68■■□□□ 1.7
TRIM35-203ENST00000521253 MS4A1P11836 297 aa25.68■■□□□ 1.7
TRIM35-203ENST00000521253 VPS37DQ86XT2 251 aa25.68■■□□□ 1.7
TRIM35-203ENST00000521253 KIAA0825Q8IV33 1275 aa25.68■■□□□ 1.7
TRIM35-203ENST00000521253 OGFOD1Q8N543 542 aa25.68■■□□□ 1.7
TRIM35-203ENST00000521253 YTHDC1Q96MU7 727 aaKnown RBP25.68■■□□□ 1.7
TRIM35-203ENST00000521253 C1orf115Q9H7X2 142 aa25.68■■□□□ 1.7
TRIM35-203ENST00000521253 CEP126Q9P2H0 1117 aa25.68■■□□□ 1.7
TRIM35-203ENST00000521253 TMEM88BA6NKF7 163 aa25.67■■□□□ 1.7
TRIM35-203ENST00000521253 CAVIN4Q5BKX8 364 aa25.67■■□□□ 1.7
TRIM35-203ENST00000521253 CDC37L1Q7L3B6 337 aa25.67■■□□□ 1.7
TRIM35-203ENST00000521253 LPIN2Q92539 896 aa25.67■■□□□ 1.7
TRIM35-203ENST00000521253 ASTN2O75129 1339 aaPredicted RBP25.66■■□□□ 1.7
TRIM35-203ENST00000521253 FAM205AQ6ZU69 1335 aa25.66■■□□□ 1.7
TRIM35-203ENST00000521253 SLC5A1P13866 664 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms