RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 SBF1O95248 1867 aa15.36■□□□□ 0.05
CLK4-208ENST00000520957 GLTPD2A6NH11 291 aa15.35■□□□□ 0.05
CLK4-208ENST00000520957 FAM84BQ96KN1 310 aaPredicted RBP15.35■□□□□ 0.05
CLK4-208ENST00000520957 GJA3Q9Y6H8 435 aa15.35■□□□□ 0.05
CLK4-208ENST00000520957 G3V3G9 751 aa15.35■□□□□ 0.05
CLK4-208ENST00000520957 APBB1O00213 710 aa15.35■□□□□ 0.05
CLK4-208ENST00000520957 DCAF8Q5TAQ9 597 aa15.35■□□□□ 0.05
CLK4-208ENST00000520957 MED23Q9ULK4 1368 aa15.34■□□□□ 0.05
CLK4-208ENST00000520957 ADORA1P30542 326 aa15.34■□□□□ 0.05
CLK4-208ENST00000520957 BCAMP50895 628 aa15.34■□□□□ 0.05
CLK4-208ENST00000520957 EIF6P56537 245 aaKnown RBP15.34■□□□□ 0.05
CLK4-208ENST00000520957 OS9Q13438 667 aaPredicted RBP15.34■□□□□ 0.05
CLK4-208ENST00000520957 PUM3Q15397 648 aaKnown RBP15.34■□□□□ 0.05
CLK4-208ENST00000520957 C15orf52Q6ZUT6 534 aaKnown RBP15.34■□□□□ 0.05
CLK4-208ENST00000520957 CD209Q9NNX6 404 aa15.34■□□□□ 0.05
CLK4-208ENST00000520957 NMRK2Q9NPI5 230 aa15.34■□□□□ 0.05
CLK4-208ENST00000520957 POTECB2RU33 542 aa15.33■□□□□ 0.04
CLK4-208ENST00000520957 ATP2B3Q16720 1220 aa15.33■□□□□ 0.04
CLK4-208ENST00000520957 DPY19L2Q6NUT2 758 aa15.33■□□□□ 0.04
CLK4-208ENST00000520957 MXD3Q9BW11 206 aa15.33■□□□□ 0.04
CLK4-208ENST00000520957 BCL11AQ9H165 835 aa15.33■□□□□ 0.04
CLK4-208ENST00000520957 IQSEC3Q9UPP2 1182 aaPredicted RBP15.33■□□□□ 0.04
CLK4-208ENST00000520957 JAG2Q9Y219 1238 aa15.33■□□□□ 0.04
CLK4-208ENST00000520957 ZBTB12Q9Y330 459 aaPredicted RBP15.33■□□□□ 0.04
CLK4-208ENST00000520957 PSMD14O00487 310 aa15.32■□□□□ 0.04
CLK4-208ENST00000520957 FBXO33Q7Z6M2 555 aa15.32■□□□□ 0.04
CLK4-208ENST00000520957 LPIN2Q92539 896 aa15.32■□□□□ 0.04
CLK4-208ENST00000520957 COA1Q9GZY4 146 aa15.32■□□□□ 0.04
CLK4-208ENST00000520957 RRAGCQ9HB90 399 aa15.32■□□□□ 0.04
CLK4-208ENST00000520957 CCDC88AQ3V6T2 1871 aa15.32■□□□□ 0.04
CLK4-208ENST00000520957 ZC3H4Q9UPT8 1303 aaKnown RBP15.32■□□□□ 0.04
CLK4-208ENST00000520957 HMMRO75330 724 aa15.32■□□□□ 0.04
CLK4-208ENST00000520957 HIBADHP31937 336 aaKnown RBP15.32■□□□□ 0.04
CLK4-208ENST00000520957 CIAPIN1Q6FI81 312 aa15.32■□□□□ 0.04
CLK4-208ENST00000520957 PODNQ7Z5L7 613 aa15.32■□□□□ 0.04
CLK4-208ENST00000520957 NEUROD6Q96NK8 337 aa15.32■□□□□ 0.04
CLK4-208ENST00000520957 A0A1B0GUL7 405 aa15.31■□□□□ 0.04
CLK4-208ENST00000520957 SHTN1A0MZ66 631 aa15.31■□□□□ 0.04
CLK4-208ENST00000520957 IFIT1P09914 478 aaKnown RBP15.31■□□□□ 0.04
CLK4-208ENST00000520957 GPC2Q8N158 579 aa15.31■□□□□ 0.04
CLK4-208ENST00000520957 IL1RAPL2Q9NP60 686 aa15.31■□□□□ 0.04
CLK4-208ENST00000520957 CHD4Q14839 1912 aa15.31■□□□□ 0.04
CLK4-208ENST00000520957 SLC5A1P13866 664 aa15.3■□□□□ 0.04
CLK4-208ENST00000520957 IL1R1P14778 569 aa15.3■□□□□ 0.04
CLK4-208ENST00000520957 GTF2IP78347 998 aa15.3■□□□□ 0.04
CLK4-208ENST00000520957 GPBP1L1Q9HC44 474 aaPredicted RBP15.3■□□□□ 0.04
CLK4-208ENST00000520957 VIL1P09327 827 aaKnown RBP15.29■□□□□ 0.04
CLK4-208ENST00000520957 PHKA1P46020 1223 aa15.29■□□□□ 0.04
CLK4-208ENST00000520957 GMPSP49915 693 aaPredicted RBP15.29■□□□□ 0.04
CLK4-208ENST00000520957 TTLL5Q6EMB2 1281 aa15.29■□□□□ 0.04
CLK4-208ENST00000520957 ZNF804AQ7Z570 1209 aa15.29■□□□□ 0.04
CLK4-208ENST00000520957 TDRD7Q8NHU6 1098 aaKnown RBP15.29■□□□□ 0.04
CLK4-208ENST00000520957 RHPN1Q8TCX5 695 aa15.29■□□□□ 0.04
CLK4-208ENST00000520957 FBXW7Q969H0 707 aa15.29■□□□□ 0.04
CLK4-208ENST00000520957 EAF2Q96CJ1 260 aaPredicted RBP15.29■□□□□ 0.04
CLK4-208ENST00000520957 XAGE2Q96GT9 111 aa15.29■□□□□ 0.04
CLK4-208ENST00000520957 DCTPP1Q9H773 170 aa15.29■□□□□ 0.04
CLK4-208ENST00000520957 KDM2BQ8NHM5 1336 aa15.29■□□□□ 0.04
CLK4-208ENST00000520957 USP17L3A6NCW0 530 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 USP17L4A6NCW7 530 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 EPS15P42566 896 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 SCNN1DP51172 638 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 TNIP1Q15025 636 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 TNNI3KQ59H18 835 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 CAVIN4Q5BKX8 364 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 USP17L1Q7RTZ2 530 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 VPS37DQ86XT2 251 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 CCDC8Q9H0W5 538 aaPredicted RBP15.28■□□□□ 0.04
CLK4-208ENST00000520957 TLR7Q9NYK1 1049 aaKnown RBP15.28■□□□□ 0.04
CLK4-208ENST00000520957 AKAP2Q9Y2D5 859 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 FPGT-TNNI3KV9GXZ4 949 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 SMARCA5O60264 1052 aaPredicted RBP15.28■□□□□ 0.04
CLK4-208ENST00000520957 IGHDP01880 384 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 DACT2Q5SW24 774 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 DBNDD2Q9BQY9 259 aa15.28■□□□□ 0.04
CLK4-208ENST00000520957 CENPBP07199 599 aaPredicted RBP15.27■□□□□ 0.03
CLK4-208ENST00000520957 CCDC102BQ68D86 513 aa15.27■□□□□ 0.03
CLK4-208ENST00000520957 CERS5Q8N5B7 392 aa15.27■□□□□ 0.03
CLK4-208ENST00000520957 L3MBTL3Q96JM7 780 aaPredicted RBP15.27■□□□□ 0.03
CLK4-208ENST00000520957 KIF3CO14782 793 aa15.26■□□□□ 0.03
CLK4-208ENST00000520957 STRIP1Q5VSL9 837 aa15.26■□□□□ 0.03
CLK4-208ENST00000520957 RSBN1LQ6PCB5 846 aaPredicted RBP15.26■□□□□ 0.03
CLK4-208ENST00000520957 GPR108Q9NPR9 543 aa15.26■□□□□ 0.03
CLK4-208ENST00000520957 DBNLQ9UJU6 430 aaKnown RBP15.26■□□□□ 0.03
CLK4-208ENST00000520957 VEGFAP15692 232 aaPredicted RBP15.25■□□□□ 0.03
CLK4-208ENST00000520957 CHAF1AQ13111 956 aaPredicted RBP15.25■□□□□ 0.03
CLK4-208ENST00000520957 GRIK5Q16478 980 aa15.25■□□□□ 0.03
CLK4-208ENST00000520957 HSP90AB4PQ58FF6 505 aa15.25■□□□□ 0.03
CLK4-208ENST00000520957 KIF1BPQ96EK5 621 aa15.25■□□□□ 0.03
CLK4-208ENST00000520957 GMLQ99445 158 aa15.25■□□□□ 0.03
CLK4-208ENST00000520957 CNOT7Q9UIV1 285 aaKnown RBP15.25■□□□□ 0.03
CLK4-208ENST00000520957 TIAM2Q8IVF5 1701 aa15.25■□□□□ 0.03
CLK4-208ENST00000520957 DICER1Q9UPY3 1922 aaKnown RBP15.25■□□□□ 0.03
CLK4-208ENST00000520957 SCN9AQ15858 1988 aa15.25■□□□□ 0.03
CLK4-208ENST00000520957 RAB11FIP3O75154 756 aa15.25■□□□□ 0.03
CLK4-208ENST00000520957 FRAT2O75474 233 aaPredicted RBP15.25■□□□□ 0.03
CLK4-208ENST00000520957 EGFRP00533 1210 aa15.25■□□□□ 0.03
CLK4-208ENST00000520957 POTEIP0CG38 1075 aa15.25■□□□□ 0.03
CLK4-208ENST00000520957 POTEJP0CG39 1038 aa15.25■□□□□ 0.03
CLK4-208ENST00000520957 HDAC1Q13547 482 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms