RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CACTIN-AS1Q8N1I8 211 aa7.46□□□□□ -1.22
SQLE-204ENST00000520493 DCAF11Q8TEB1 546 aa7.46□□□□□ -1.22
SQLE-204ENST00000520493 FAM13AO94988 1023 aa7.45□□□□□ -1.22
SQLE-204ENST00000520493 MPSTP25325 297 aa7.45□□□□□ -1.22
SQLE-204ENST00000520493 EIF1AXP47813 144 aaKnown RBP7.45□□□□□ -1.22
SQLE-204ENST00000520493 SF3B2Q13435 895 aaKnown RBP7.45□□□□□ -1.22
SQLE-204ENST00000520493 ATCAYQ86WG3 371 aa7.45□□□□□ -1.22
SQLE-204ENST00000520493 FBXO11Q86XK2 927 aa7.45□□□□□ -1.22
SQLE-204ENST00000520493 EDEM1Q92611 657 aa7.45□□□□□ -1.22
SQLE-204ENST00000520493 FAM177BA6PVY3 158 aa7.44□□□□□ -1.22
SQLE-204ENST00000520493 ABL1P00519 1130 aa7.44□□□□□ -1.22
SQLE-204ENST00000520493 MZF1P28698 734 aaPredicted RBP7.44□□□□□ -1.22
SQLE-204ENST00000520493 GRIK5Q16478 980 aa7.44□□□□□ -1.22
SQLE-204ENST00000520493 C8orf34Q49A92 452 aa7.44□□□□□ -1.22
SQLE-204ENST00000520493 GDF6Q6KF10 455 aaPredicted RBP7.44□□□□□ -1.22
SQLE-204ENST00000520493 ILDR2Q71H61 639 aa7.44□□□□□ -1.22
SQLE-204ENST00000520493 ELP3Q9H9T3 547 aa7.44□□□□□ -1.22
SQLE-204ENST00000520493 SMNDC1O75940 238 aaKnown RBP eCLIP7.43□□□□□ -1.22
SQLE-204ENST00000520493 ALX3O95076 343 aa7.43□□□□□ -1.22
SQLE-204ENST00000520493 C8AP07357 584 aa7.43□□□□□ -1.22
SQLE-204ENST00000520493 IGF2-ASQ6U949 168 aa7.43□□□□□ -1.22
SQLE-204ENST00000520493 NCAPG2Q86XI2 1143 aa7.43□□□□□ -1.22
SQLE-204ENST00000520493 MUC3BQ9H195 1237 aa7.43□□□□□ -1.22
SQLE-204ENST00000520493 SRA1Q9HD15 236 aaKnown RBP7.43□□□□□ -1.22
SQLE-204ENST00000520493 PDGFAP04085 211 aa7.42□□□□□ -1.22
SQLE-204ENST00000520493 USP5P45974 858 aa7.42□□□□□ -1.22
SQLE-204ENST00000520493 FKBP4Q02790 459 aaKnown RBP eCLIP7.42□□□□□ -1.22
SQLE-204ENST00000520493 MTMR3Q13615 1198 aa7.42□□□□□ -1.22
SQLE-204ENST00000520493 MAP4K3Q8IVH8 894 aa7.42□□□□□ -1.22
SQLE-204ENST00000520493 DZIP1LQ8IYY4 767 aaKnown RBP7.42□□□□□ -1.22
SQLE-204ENST00000520493 IL22RA1Q8N6P7 574 aa7.42□□□□□ -1.22
SQLE-204ENST00000520493 CARNS1A5YM72 827 aa7.41□□□□□ -1.22
SQLE-204ENST00000520493 IGLV1-40P01703 118 aa7.41□□□□□ -1.22
SQLE-204ENST00000520493 EHHADHQ08426 723 aa7.41□□□□□ -1.22
SQLE-204ENST00000520493 XKR5Q6UX68 686 aa7.41□□□□□ -1.22
SQLE-204ENST00000520493 PMEPA1Q969W9 287 aa7.41□□□□□ -1.22
SQLE-204ENST00000520493 KRTAP17-1Q9BYP8 105 aa7.41□□□□□ -1.22
SQLE-204ENST00000520493 TMEM63CQ9P1W3 806 aa7.41□□□□□ -1.22
SQLE-204ENST00000520493 ADGRE2Q9UHX3 823 aa7.41□□□□□ -1.22
SQLE-204ENST00000520493 KIF4AO95239 1232 aa7.4□□□□□ -1.22
SQLE-204ENST00000520493 NPR3P17342 541 aa7.4□□□□□ -1.22
SQLE-204ENST00000520493 CES1P23141 567 aa7.4□□□□□ -1.22
SQLE-204ENST00000520493 CEP135Q66GS9 1140 aa7.4□□□□□ -1.22
SQLE-204ENST00000520493 PHLDB3Q6NSJ2 640 aa7.4□□□□□ -1.22
SQLE-204ENST00000520493 AKTIPQ9H8T0 292 aa7.4□□□□□ -1.22
SQLE-204ENST00000520493 POLIQ9UNA4 740 aa7.4□□□□□ -1.22
SQLE-204ENST00000520493 GSC2O15499 205 aa7.39□□□□□ -1.23
SQLE-204ENST00000520493 WNT11O96014 354 aa7.39□□□□□ -1.23
SQLE-204ENST00000520493 SPINK2P20155 84 aa7.39□□□□□ -1.23
SQLE-204ENST00000520493 GRIK1P39086 918 aa7.39□□□□□ -1.23
SQLE-204ENST00000520493 ZNF211Q13398 564 aaPredicted RBP7.39□□□□□ -1.23
SQLE-204ENST00000520493 COL13A1Q5TAT6 717 aaPredicted RBP7.39□□□□□ -1.23
SQLE-204ENST00000520493 EGFL7Q9UHF1 273 aa7.39□□□□□ -1.23
SQLE-204ENST00000520493 TRIM33Q9UPN9 1127 aa7.39□□□□□ -1.23
SQLE-204ENST00000520493 PPME1Q9Y570 386 aa7.39□□□□□ -1.23
SQLE-204ENST00000520493 CYP2E1P05181 493 aaPredicted RBP7.38□□□□□ -1.23
SQLE-204ENST00000520493 ATP11AP98196 1134 aa7.38□□□□□ -1.23
SQLE-204ENST00000520493 FAM117BQ6P1L5 589 aa7.38□□□□□ -1.23
SQLE-204ENST00000520493 ANO2Q9NQ90 1003 aa7.38□□□□□ -1.23
SQLE-204ENST00000520493 KANSL3Q9P2N6 904 aa7.38□□□□□ -1.23
SQLE-204ENST00000520493 RAXQ9Y2V3 346 aa7.38□□□□□ -1.23
SQLE-204ENST00000520493 PTPRAP18433 802 aa7.37□□□□□ -1.23
SQLE-204ENST00000520493 CDC27P30260 824 aa7.37□□□□□ -1.23
SQLE-204ENST00000520493 INTS5Q6P9B9 1019 aaKnown RBP7.37□□□□□ -1.23
SQLE-204ENST00000520493 GLYCTKQ8IVS8 523 aa7.37□□□□□ -1.23
SQLE-204ENST00000520493 SNX29Q8TEQ0 813 aa7.37□□□□□ -1.23
SQLE-204ENST00000520493 PBX4Q9BYU1 374 aa7.37□□□□□ -1.23
SQLE-204ENST00000520493 LACRTQ9GZZ8 138 aa7.37□□□□□ -1.23
SQLE-204ENST00000520493 RASSF4Q9H2L5 321 aa7.37□□□□□ -1.23
SQLE-204ENST00000520493 GGNBP2Q9H3C7 697 aa7.37□□□□□ -1.23
SQLE-204ENST00000520493 H3BRB1 525 aa7.36□□□□□ -1.23
SQLE-204ENST00000520493 PHACTR2O75167 634 aa7.36□□□□□ -1.23
SQLE-204ENST00000520493 DEAF1O75398 565 aaPredicted RBP7.36□□□□□ -1.23
SQLE-204ENST00000520493 CEP120Q8N960 986 aa7.36□□□□□ -1.23
SQLE-204ENST00000520493 C1orf127Q8N9H9 656 aa7.36□□□□□ -1.23
SQLE-204ENST00000520493 RETREG2Q8NC44 543 aa7.36□□□□□ -1.23
SQLE-204ENST00000520493 MRPL18Q9H0U6 180 aaKnown RBP7.36□□□□□ -1.23
SQLE-204ENST00000520493 TUT1Q9H6E5 874 aaKnown RBP7.36□□□□□ -1.23
SQLE-204ENST00000520493 CNTN3Q9P232 1028 aa7.36□□□□□ -1.23
SQLE-204ENST00000520493 STOML1Q9UBI4 398 aa7.36□□□□□ -1.23
SQLE-204ENST00000520493 A6NHS1 94 aa7.35□□□□□ -1.23
SQLE-204ENST00000520493 DLL1O00548 723 aa7.35□□□□□ -1.23
SQLE-204ENST00000520493 ICMTO60725 284 aa7.35□□□□□ -1.23
SQLE-204ENST00000520493 CABP4P57796 275 aa7.35□□□□□ -1.23
SQLE-204ENST00000520493 ZDHHC13Q8IUH4 622 aa7.35□□□□□ -1.23
SQLE-204ENST00000520493 CCER1Q8TC90 406 aaPredicted RBP7.35□□□□□ -1.23
SQLE-204ENST00000520493 FZD6O60353 706 aa7.34□□□□□ -1.23
SQLE-204ENST00000520493 TNFRSF21O75509 655 aa7.34□□□□□ -1.23
SQLE-204ENST00000520493 PDIA4P13667 645 aaKnown RBP7.34□□□□□ -1.23
SQLE-204ENST00000520493 EDN3P14138 238 aa7.34□□□□□ -1.23
SQLE-204ENST00000520493 DTX1Q86Y01 620 aa7.34□□□□□ -1.23
SQLE-204ENST00000520493 SALL4Q9UJQ4 1053 aa7.34□□□□□ -1.23
SQLE-204ENST00000520493 BRPF3Q9ULD4 1205 aa7.34□□□□□ -1.23
SQLE-204ENST00000520493 LINC01387J3KSC0 135 aa7.33□□□□□ -1.24
SQLE-204ENST00000520493 NDUFB5O43674 189 aa7.33□□□□□ -1.24
SQLE-204ENST00000520493 GLB1P16278 677 aa7.33□□□□□ -1.24
SQLE-204ENST00000520493 SERPINB4P48594 390 aa7.33□□□□□ -1.24
SQLE-204ENST00000520493 SETDB1Q15047 1291 aa7.33□□□□□ -1.24
SQLE-204ENST00000520493 GJD3Q8N144 294 aa7.33□□□□□ -1.24
SQLE-204ENST00000520493 POU5F2Q8N7G0 328 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms