RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 USP5P45974 858 aa8.48□□□□□ -1.05
SKP1-207ENST00000520417 MAP4K3Q8IVH8 894 aa8.48□□□□□ -1.05
SKP1-207ENST00000520417 GLYCTKQ8IVS8 523 aa8.48□□□□□ -1.05
SKP1-207ENST00000520417 PMEPA1Q969W9 287 aa8.48□□□□□ -1.05
SKP1-207ENST00000520417 POP1Q99575 1024 aaKnown RBP8.48□□□□□ -1.05
SKP1-207ENST00000520417 MRPL18Q9H0U6 180 aaKnown RBP8.48□□□□□ -1.05
SKP1-207ENST00000520417 AKTIPQ9H8T0 292 aa8.48□□□□□ -1.05
SKP1-207ENST00000520417 SALL4Q9UJQ4 1053 aa8.48□□□□□ -1.05
SKP1-207ENST00000520417 FOXD3Q9UJU5 478 aaPredicted RBP8.48□□□□□ -1.05
SKP1-207ENST00000520417 EREGO14944 169 aa8.47□□□□□ -1.05
SKP1-207ENST00000520417 FZD6O60353 706 aa8.47□□□□□ -1.05
SKP1-207ENST00000520417 NPR3P17342 541 aa8.47□□□□□ -1.05
SKP1-207ENST00000520417 EHHADHQ08426 723 aa8.47□□□□□ -1.05
SKP1-207ENST00000520417 ADAMTSL4Q6UY14 1074 aa8.47□□□□□ -1.05
SKP1-207ENST00000520417 DCAF11Q8TEB1 546 aa8.47□□□□□ -1.05
SKP1-207ENST00000520417 SRA1Q9HD15 236 aaKnown RBP8.47□□□□□ -1.05
SKP1-207ENST00000520417 LOC100996750A0A140TA64 210 aa8.46□□□□□ -1.06
SKP1-207ENST00000520417 TNFRSF21O75509 655 aa8.46□□□□□ -1.06
SKP1-207ENST00000520417 EPHA1P21709 976 aa8.46□□□□□ -1.06
SKP1-207ENST00000520417 CABP4P57796 275 aa8.46□□□□□ -1.06
SKP1-207ENST00000520417 AGGF1Q8N302 714 aaeCLIP8.46□□□□□ -1.06
SKP1-207ENST00000520417 GALNT11Q8NCW6 608 aa8.46□□□□□ -1.06
SKP1-207ENST00000520417 SNX29Q8TEQ0 813 aa8.46□□□□□ -1.06
SKP1-207ENST00000520417 KRTAP4-6Q9BYQ5 205 aa8.46□□□□□ -1.06
SKP1-207ENST00000520417 CHRDQ9H2X0 955 aa8.46□□□□□ -1.06
SKP1-207ENST00000520417 PDE2AO00408 941 aaPredicted RBP8.45□□□□□ -1.06
SKP1-207ENST00000520417 FSCN2O14926 492 aa8.45□□□□□ -1.06
SKP1-207ENST00000520417 ICMTO60725 284 aa8.45□□□□□ -1.06
SKP1-207ENST00000520417 GLB1P16278 677 aa8.45□□□□□ -1.06
SKP1-207ENST00000520417 ITGB7P26010 798 aa8.45□□□□□ -1.06
SKP1-207ENST00000520417 SLC7A3Q8WY07 619 aa8.45□□□□□ -1.06
SKP1-207ENST00000520417 MEGF10Q96KG7 1140 aa8.45□□□□□ -1.06
SKP1-207ENST00000520417 HHIPQ96QV1 700 aa8.45□□□□□ -1.06
SKP1-207ENST00000520417 OSMRQ99650 979 aa8.45□□□□□ -1.06
SKP1-207ENST00000520417 BRPF3Q9ULD4 1205 aa8.45□□□□□ -1.06
SKP1-207ENST00000520417 CD68P34810 354 aaPredicted RBP8.44□□□□□ -1.06
SKP1-207ENST00000520417 PRSS36Q5K4E3 855 aa8.44□□□□□ -1.06
SKP1-207ENST00000520417 ZMYM1Q5SVZ6 1142 aa8.44□□□□□ -1.06
SKP1-207ENST00000520417 ACAD11Q709F0 780 aa8.44□□□□□ -1.06
SKP1-207ENST00000520417 ASAP3Q8TDY4 903 aa8.44□□□□□ -1.06
SKP1-207ENST00000520417 DZANK1Q9NVP4 752 aa8.44□□□□□ -1.06
SKP1-207ENST00000520417 F8W735 103 aaPredicted RBP8.43□□□□□ -1.06
SKP1-207ENST00000520417 POLR3DP05423 398 aaPredicted RBP8.43□□□□□ -1.06
SKP1-207ENST00000520417 PDE4CQ08493 712 aa8.43□□□□□ -1.06
SKP1-207ENST00000520417 EGFL7Q9UHF1 273 aa8.43□□□□□ -1.06
SKP1-207ENST00000520417 SCO2A0A1W2PP80 73 aa8.42□□□□□ -1.06
SKP1-207ENST00000520417 DDX3YO15523 660 aaKnown RBP8.42□□□□□ -1.06
SKP1-207ENST00000520417 H2AFB1P0C5Y9 115 aa8.42□□□□□ -1.06
SKP1-207ENST00000520417 H2AFB2P0C5Z0 115 aa8.42□□□□□ -1.06
SKP1-207ENST00000520417 EDN3P14138 238 aa8.42□□□□□ -1.06
SKP1-207ENST00000520417 DUOXA2Q1HG44 320 aa8.42□□□□□ -1.06
SKP1-207ENST00000520417 FOXD4L6Q3SYB3 417 aaPredicted RBP8.42□□□□□ -1.06
SKP1-207ENST00000520417 FOXD4L3Q6VB84 417 aaPredicted RBP8.42□□□□□ -1.06
SKP1-207ENST00000520417 TMC1Q8TDI8 760 aa8.42□□□□□ -1.06
SKP1-207ENST00000520417 ZKSCAN3Q9BRR0 538 aa8.42□□□□□ -1.06
SKP1-207ENST00000520417 SEC31BQ9NQW1 1179 aa8.42□□□□□ -1.06
SKP1-207ENST00000520417 KCNK4Q9NYG8 393 aa8.42□□□□□ -1.06
SKP1-207ENST00000520417 AMOTL2Q9Y2J4 779 aa8.42□□□□□ -1.06
SKP1-207ENST00000520417 H3BRJ5 948 aa8.41□□□□□ -1.06
SKP1-207ENST00000520417 WISP1O95388 367 aa8.41□□□□□ -1.06
SKP1-207ENST00000520417 GJD3Q8N144 294 aa8.41□□□□□ -1.06
SKP1-207ENST00000520417 TMEM130Q8N3G9 435 aa8.41□□□□□ -1.06
SKP1-207ENST00000520417 KLHL23Q8NBE8 558 aa8.41□□□□□ -1.06
SKP1-207ENST00000520417 KLHDC7BQ96G42 594 aa8.41□□□□□ -1.06
SKP1-207ENST00000520417 SSBP4Q9BWG4 385 aaPredicted RBP8.41□□□□□ -1.06
SKP1-207ENST00000520417 ADAM19Q9H013 955 aa8.41□□□□□ -1.06
SKP1-207ENST00000520417 LATS2Q9NRM7 1088 aa8.41□□□□□ -1.06
SKP1-207ENST00000520417 NFKBIEO00221 500 aa8.4□□□□□ -1.06
SKP1-207ENST00000520417 NDUFB5O43674 189 aa8.4□□□□□ -1.06
SKP1-207ENST00000520417 ARL4DP49703 201 aa8.4□□□□□ -1.06
SKP1-207ENST00000520417 NLRP12P59046 1061 aa8.4□□□□□ -1.06
SKP1-207ENST00000520417 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.39□□□□□ -1.07
SKP1-207ENST00000520417 Q8N3U1 123 aa8.39□□□□□ -1.07
SKP1-207ENST00000520417 TMEM102Q8N9M5 508 aaPredicted RBP8.39□□□□□ -1.07
SKP1-207ENST00000520417 CCER1Q8TC90 406 aaPredicted RBP8.39□□□□□ -1.07
SKP1-207ENST00000520417 UBASH3BQ8TF42 649 aa8.39□□□□□ -1.07
SKP1-207ENST00000520417 NXPE3Q969Y0 559 aa8.39□□□□□ -1.07
SKP1-207ENST00000520417 ZFYVE28Q9HCC9 887 aa8.39□□□□□ -1.07
SKP1-207ENST00000520417 PIP4K2BP78356 416 aa8.38□□□□□ -1.07
SKP1-207ENST00000520417 BSNDQ8WZ55 320 aa8.38□□□□□ -1.07
SKP1-207ENST00000520417 IKBKEQ14164 716 aa8.37□□□□□ -1.07
SKP1-207ENST00000520417 DZIP1LQ8IYY4 767 aaKnown RBP8.37□□□□□ -1.07
SKP1-207ENST00000520417 FOXD4L4Q8WXT5 416 aaPredicted RBP8.37□□□□□ -1.07
SKP1-207ENST00000520417 METTL12A8MUP2 240 aa8.36□□□□□ -1.07
SKP1-207ENST00000520417 ADAM11O75078 769 aa8.36□□□□□ -1.07
SKP1-207ENST00000520417 HGSNATQ68CP4 663 aa8.36□□□□□ -1.07
SKP1-207ENST00000520417 PRR23CQ6ZRP0 262 aa8.36□□□□□ -1.07
SKP1-207ENST00000520417 TXNDC2Q86VQ3 553 aa8.36□□□□□ -1.07
SKP1-207ENST00000520417 CEP41Q9BYV8 373 aa8.36□□□□□ -1.07
SKP1-207ENST00000520417 BIN2Q9UBW5 565 aaPredicted RBP8.36□□□□□ -1.07
SKP1-207ENST00000520417 SOX13Q9UN79 622 aa8.36□□□□□ -1.07
SKP1-207ENST00000520417 SART1O43290 800 aaKnown RBP8.35□□□□□ -1.07
SKP1-207ENST00000520417 NEFLP07196 543 aa8.35□□□□□ -1.07
SKP1-207ENST00000520417 ARHGAP4P98171 946 aa8.35□□□□□ -1.07
SKP1-207ENST00000520417 C19orf57Q0VDD7 668 aa8.35□□□□□ -1.07
SKP1-207ENST00000520417 PDE3BQ13370 1112 aa8.35□□□□□ -1.07
SKP1-207ENST00000520417 PEAR1Q5VY43 1037 aaPredicted RBP8.35□□□□□ -1.07
SKP1-207ENST00000520417 UBL7Q96S82 380 aaPredicted RBP8.35□□□□□ -1.07
SKP1-207ENST00000520417 OSGEPQ9NPF4 335 aa8.35□□□□□ -1.07
SKP1-207ENST00000520417 SOX1O00570 391 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms