RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 SRCIN1Q9C0H9 1055 aa20.44■□□□□ 0.86
IGHV3-42-201ENST00000520410 LEMD3Q9Y2U8 911 aa20.44■□□□□ 0.86
IGHV3-42-201ENST00000520410 SCN9AQ15858 1988 aa20.43■□□□□ 0.86
IGHV3-42-201ENST00000520410 GRM8O00222 908 aa20.43■□□□□ 0.86
IGHV3-42-201ENST00000520410 PLIN1O60240 522 aa20.43■□□□□ 0.86
IGHV3-42-201ENST00000520410 LBX1P52954 281 aa20.43■□□□□ 0.86
IGHV3-42-201ENST00000520410 HUNKP57058 714 aa20.43■□□□□ 0.86
IGHV3-42-201ENST00000520410 CHRNDQ07001 517 aa20.43■□□□□ 0.86
IGHV3-42-201ENST00000520410 CCDC57Q2TAC2 916 aa20.43■□□□□ 0.86
IGHV3-42-201ENST00000520410 LMBR1LQ6UX01 489 aa20.43■□□□□ 0.86
IGHV3-42-201ENST00000520410 SAPCD2Q86UD0 394 aa20.43■□□□□ 0.86
IGHV3-42-201ENST00000520410 WBP1LQ9NX94 342 aa20.43■□□□□ 0.86
IGHV3-42-201ENST00000520410 CACNA1FO60840 1977 aa20.43■□□□□ 0.86
IGHV3-42-201ENST00000520410 CSF1RP07333 972 aa20.42■□□□□ 0.86
IGHV3-42-201ENST00000520410 SCARF1Q14162 830 aa20.42■□□□□ 0.86
IGHV3-42-201ENST00000520410 ANGEL2Q5VTE6 544 aaKnown RBP20.42■□□□□ 0.86
IGHV3-42-201ENST00000520410 C2orf69Q8N8R5 385 aa20.42■□□□□ 0.86
IGHV3-42-201ENST00000520410 HELBQ8NG08 1087 aaPredicted RBP20.42■□□□□ 0.86
IGHV3-42-201ENST00000520410 MXD3Q9BW11 206 aa20.42■□□□□ 0.86
IGHV3-42-201ENST00000520410 COA1Q9GZY4 146 aa20.42■□□□□ 0.86
IGHV3-42-201ENST00000520410 MYOZ2Q9NPC6 264 aa20.42■□□□□ 0.86
IGHV3-42-201ENST00000520410 CNNM1Q9NRU3 951 aa20.42■□□□□ 0.86
IGHV3-42-201ENST00000520410 ASTN2O75129 1339 aaPredicted RBP20.42■□□□□ 0.86
IGHV3-42-201ENST00000520410 E9PSI1 815 aa20.41■□□□□ 0.86
IGHV3-42-201ENST00000520410 TAF5LO75529 589 aa20.41■□□□□ 0.86
IGHV3-42-201ENST00000520410 KLRK1P26718 216 aa20.41■□□□□ 0.86
IGHV3-42-201ENST00000520410 OGFOD1Q8N543 542 aa20.41■□□□□ 0.86
IGHV3-42-201ENST00000520410 FOXO4P98177 505 aa20.4■□□□□ 0.86
IGHV3-42-201ENST00000520410 TXNRD3Q86VQ6 643 aa20.4■□□□□ 0.86
IGHV3-42-201ENST00000520410 ZNF594Q96JF6 807 aaPredicted RBP20.4■□□□□ 0.86
IGHV3-42-201ENST00000520410 GBA2Q9HCG7 927 aaPredicted RBP20.4■□□□□ 0.86
IGHV3-42-201ENST00000520410 MYO3BQ8WXR4 1341 aa20.39■□□□□ 0.85
IGHV3-42-201ENST00000520410 ALDH1L1O75891 902 aa20.39■□□□□ 0.85
IGHV3-42-201ENST00000520410 ZNF521Q96K83 1311 aa20.38■□□□□ 0.85
IGHV3-42-201ENST00000520410 ZNF280AP59817 542 aaPredicted RBP20.38■□□□□ 0.85
IGHV3-42-201ENST00000520410 GTF2IP78347 998 aa20.38■□□□□ 0.85
IGHV3-42-201ENST00000520410 EPHA10Q5JZY3 1008 aa20.38■□□□□ 0.85
IGHV3-42-201ENST00000520410 TTLL5Q6EMB2 1281 aa20.38■□□□□ 0.85
IGHV3-42-201ENST00000520410 LDHAL6AQ6ZMR3 332 aa20.38■□□□□ 0.85
IGHV3-42-201ENST00000520410 CDCA5Q96FF9 252 aa20.38■□□□□ 0.85
IGHV3-42-201ENST00000520410 TSKSQ9UJT2 592 aa20.38■□□□□ 0.85
IGHV3-42-201ENST00000520410 HDAC9Q9UKV0 1011 aa20.38■□□□□ 0.85
IGHV3-42-201ENST00000520410 SCAF8Q9UPN6 1271 aaKnown RBP20.38■□□□□ 0.85
IGHV3-42-201ENST00000520410 SNAP23O00161 211 aa20.37■□□□□ 0.85
IGHV3-42-201ENST00000520410 HSPA8P11142 646 aaKnown RBP20.37■□□□□ 0.85
IGHV3-42-201ENST00000520410 DACT2Q5SW24 774 aa20.37■□□□□ 0.85
IGHV3-42-201ENST00000520410 STRIP1Q5VSL9 837 aa20.37■□□□□ 0.85
IGHV3-42-201ENST00000520410 ZNF804AQ7Z570 1209 aa20.37■□□□□ 0.85
IGHV3-42-201ENST00000520410 KIAA0825Q8IV33 1275 aa20.37■□□□□ 0.85
IGHV3-42-201ENST00000520410 PRDM10Q9NQV6 1147 aa20.37■□□□□ 0.85
IGHV3-42-201ENST00000520410 PSME4Q14997 1843 aa20.37■□□□□ 0.85
IGHV3-42-201ENST00000520410 SASH1O94885 1247 aa20.36■□□□□ 0.85
IGHV3-42-201ENST00000520410 MAP2K2P36507 400 aa20.36■□□□□ 0.85
IGHV3-42-201ENST00000520410 TTLL12Q14166 644 aaPredicted RBP20.36■□□□□ 0.85
IGHV3-42-201ENST00000520410 MRPL50Q8N5N7 158 aaKnown RBP20.36■□□□□ 0.85
IGHV3-42-201ENST00000520410 SUCLG2Q96I99 432 aa20.36■□□□□ 0.85
IGHV3-42-201ENST00000520410 THSD7BQ9C0I4 1608 aa20.35■□□□□ 0.85
IGHV3-42-201ENST00000520410 ZNF157P51786 506 aaPredicted RBP20.35■□□□□ 0.85
IGHV3-42-201ENST00000520410 RGMBQ6NW40 437 aa20.35■□□□□ 0.85
IGHV3-42-201ENST00000520410 HHIPL1Q96JK4 782 aa20.35■□□□□ 0.85
IGHV3-42-201ENST00000520410 GMLQ99445 158 aa20.35■□□□□ 0.85
IGHV3-42-201ENST00000520410 SMC4Q9NTJ3 1288 aa20.35■□□□□ 0.85
IGHV3-42-201ENST00000520410 ZNF609O15014 1411 aa20.35■□□□□ 0.85
IGHV3-42-201ENST00000520410 F8W031 263 aaPredicted RBP20.34■□□□□ 0.85
IGHV3-42-201ENST00000520410 NBPF9Q3BBW0 867 aa20.34■□□□□ 0.85
IGHV3-42-201ENST00000520410 CD209Q9NNX6 404 aa20.34■□□□□ 0.85
IGHV3-42-201ENST00000520410 JAG2Q9Y219 1238 aa20.34■□□□□ 0.85
IGHV3-42-201ENST00000520410 PTPRCP08575 1304 aa20.33■□□□□ 0.85
IGHV3-42-201ENST00000520410 NBPF7P0C2Y1 421 aaPredicted RBP20.33■□□□□ 0.85
IGHV3-42-201ENST00000520410 SLFN5Q08AF3 891 aa20.33■□□□□ 0.85
IGHV3-42-201ENST00000520410 NOGQ13253 232 aa20.33■□□□□ 0.85
IGHV3-42-201ENST00000520410 SSH1Q8WYL5 1049 aa20.33■□□□□ 0.85
IGHV3-42-201ENST00000520410 CDCA7LQ96GN5 454 aa20.33■□□□□ 0.85
IGHV3-42-201ENST00000520410 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.32■□□□□ 0.84
IGHV3-42-201ENST00000520410 PITPNM2Q9BZ72 1349 aa20.31■□□□□ 0.84
IGHV3-42-201ENST00000520410 NF2P35240 595 aa20.31■□□□□ 0.84
IGHV3-42-201ENST00000520410 BRPF1P55201 1214 aaPredicted RBP20.31■□□□□ 0.84
IGHV3-42-201ENST00000520410 PRAMEF18Q5VWM3 479 aa20.31■□□□□ 0.84
IGHV3-42-201ENST00000520410 BICC1Q9H694 974 aaKnown RBP20.31■□□□□ 0.84
IGHV3-42-201ENST00000520410 WNT10BO00744 389 aa20.3■□□□□ 0.84
IGHV3-42-201ENST00000520410 RBM5P52756 815 aaKnown RBP eCLIP20.3■□□□□ 0.84
IGHV3-42-201ENST00000520410 CCDC102AQ96A19 550 aa20.3■□□□□ 0.84
IGHV3-42-201ENST00000520410 POLR2AP24928 1970 aaKnown RBP20.29■□□□□ 0.84
IGHV3-42-201ENST00000520410 PRKG1Q13976 671 aa20.29■□□□□ 0.84
IGHV3-42-201ENST00000520410 DLGAP5Q15398 846 aa20.29■□□□□ 0.84
IGHV3-42-201ENST00000520410 PUS3Q9BZE2 481 aaKnown RBP20.29■□□□□ 0.84
IGHV3-42-201ENST00000520410 A0A1B0GUL6 1792 aa20.29■□□□□ 0.84
IGHV3-42-201ENST00000520410 CA12O43570 354 aa20.28■□□□□ 0.84
IGHV3-42-201ENST00000520410 METTL24Q5JXM2 366 aa20.28■□□□□ 0.84
IGHV3-42-201ENST00000520410 VPS37DQ86XT2 251 aa20.28■□□□□ 0.84
IGHV3-42-201ENST00000520410 ZIC5Q96T25 663 aa20.28■□□□□ 0.84
IGHV3-42-201ENST00000520410 CCER2I3L3R5 266 aa20.27■□□□□ 0.84
IGHV3-42-201ENST00000520410 FRAT2O75474 233 aaPredicted RBP20.27■□□□□ 0.84
IGHV3-42-201ENST00000520410 KIF23Q02241 960 aaPredicted RBP20.27■□□□□ 0.84
IGHV3-42-201ENST00000520410 ALDH1L2Q3SY69 923 aa20.27■□□□□ 0.84
IGHV3-42-201ENST00000520410 MOB2Q70IA6 237 aa20.27■□□□□ 0.84
IGHV3-42-201ENST00000520410 APOBEC3FQ8IUX4 373 aaKnown RBP20.27■□□□□ 0.84
IGHV3-42-201ENST00000520410 MYO1BO43795 1136 aa20.26■□□□□ 0.83
IGHV3-42-201ENST00000520410 GYG1P46976 350 aa20.26■□□□□ 0.83
IGHV3-42-201ENST00000520410 MROH5Q6ZUA9 1318 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms