RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 RBM17Q96I25 401 aaKnown RBP6.58□□□□□ -1.36
SDCBP-207ENST00000520168 CRAMP1Q96RY5 1269 aa6.58□□□□□ -1.36
SDCBP-207ENST00000520168 BCL2L13Q9BXK5 485 aa6.58□□□□□ -1.36
SDCBP-207ENST00000520168 GBA2Q9HCG7 927 aaPredicted RBP6.58□□□□□ -1.36
SDCBP-207ENST00000520168 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.58□□□□□ -1.36
SDCBP-207ENST00000520168 ZNRF3Q9ULT6 936 aa6.58□□□□□ -1.36
SDCBP-207ENST00000520168 CEMIPQ8WUJ3 1361 aa6.57□□□□□ -1.36
SDCBP-207ENST00000520168 PSME4Q14997 1843 aa6.57□□□□□ -1.36
SDCBP-207ENST00000520168 SLC10A3P09131 477 aa6.57□□□□□ -1.36
SDCBP-207ENST00000520168 GMPSP49915 693 aaPredicted RBP6.57□□□□□ -1.36
SDCBP-207ENST00000520168 KIF23Q02241 960 aaPredicted RBP6.57□□□□□ -1.36
SDCBP-207ENST00000520168 CXCL9Q07325 125 aa6.57□□□□□ -1.36
SDCBP-207ENST00000520168 FBXO46Q6PJ61 603 aaPredicted RBP6.57□□□□□ -1.36
SDCBP-207ENST00000520168 Q6ZNB5 142 aa6.57□□□□□ -1.36
SDCBP-207ENST00000520168 PACS2Q86VP3 889 aa6.57□□□□□ -1.36
SDCBP-207ENST00000520168 DDX12PQ92771 950 aa6.57□□□□□ -1.36
SDCBP-207ENST00000520168 DPF2Q92785 391 aa6.57□□□□□ -1.36
SDCBP-207ENST00000520168 HDAC9Q9UKV0 1011 aa6.57□□□□□ -1.36
SDCBP-207ENST00000520168 BTBD11A6QL63 1104 aa6.56□□□□□ -1.36
SDCBP-207ENST00000520168 ERVV-1B6SEH8 477 aa6.56□□□□□ -1.36
SDCBP-207ENST00000520168 HMOX1P09601 288 aa6.56□□□□□ -1.36
SDCBP-207ENST00000520168 SNRPA1P09661 255 aaKnown RBP6.56□□□□□ -1.36
SDCBP-207ENST00000520168 FKBP1BP68106 108 aa6.56□□□□□ -1.36
SDCBP-207ENST00000520168 LAPTM4AQ15012 233 aa6.56□□□□□ -1.36
SDCBP-207ENST00000520168 AOC3Q16853 763 aa6.56□□□□□ -1.36
SDCBP-207ENST00000520168 INTS3Q68E01 1043 aaKnown RBP6.56□□□□□ -1.36
SDCBP-207ENST00000520168 ZIC5Q96T25 663 aa6.56□□□□□ -1.36
SDCBP-207ENST00000520168 RTFDC1Q9BY42 306 aaPredicted RBP6.56□□□□□ -1.36
SDCBP-207ENST00000520168 ATP6V0A2Q9Y487 856 aa6.56□□□□□ -1.36
SDCBP-207ENST00000520168 ABCC12Q96J65 1359 aa6.56□□□□□ -1.36
SDCBP-207ENST00000520168 TAF1P21675 1872 aa6.56□□□□□ -1.36
SDCBP-207ENST00000520168 KDM3BQ7LBC6 1761 aa6.55□□□□□ -1.36
SDCBP-207ENST00000520168 DIAPH1O60610 1272 aaKnown RBP6.55□□□□□ -1.36
SDCBP-207ENST00000520168 RPS12P25398 132 aaKnown RBP6.55□□□□□ -1.36
SDCBP-207ENST00000520168 FXR1P51114 621 aaKnown RBP eCLIP6.55□□□□□ -1.36
SDCBP-207ENST00000520168 KIAA2012Q0VF49 1180 aa6.55□□□□□ -1.36
SDCBP-207ENST00000520168 TPRNQ4KMQ1 711 aa6.55□□□□□ -1.36
SDCBP-207ENST00000520168 KRT26Q7Z3Y9 468 aa6.55□□□□□ -1.36
SDCBP-207ENST00000520168 TMC4Q7Z404 712 aa6.55□□□□□ -1.36
SDCBP-207ENST00000520168 USP48Q86UV5 1035 aa6.55□□□□□ -1.36
SDCBP-207ENST00000520168 SPRYD3Q8NCJ5 442 aa6.55□□□□□ -1.36
SDCBP-207ENST00000520168 DCPSQ96C86 337 aaKnown RBP6.55□□□□□ -1.36
SDCBP-207ENST00000520168 CSRNP1Q96S65 589 aa6.55□□□□□ -1.36
SDCBP-207ENST00000520168 PANK3Q9H999 370 aa6.55□□□□□ -1.36
SDCBP-207ENST00000520168 CNOT7Q9UIV1 285 aaKnown RBP6.55□□□□□ -1.36
SDCBP-207ENST00000520168 KNSTRNQ9Y448 316 aa6.55□□□□□ -1.36
SDCBP-207ENST00000520168 RANBP2P49792 3224 aaKnown RBP6.54□□□□□ -1.36
SDCBP-207ENST00000520168 FAM177BA6PVY3 158 aa6.54□□□□□ -1.36
SDCBP-207ENST00000520168 MAP3K7O43318 606 aa6.54□□□□□ -1.36
SDCBP-207ENST00000520168 HIRAP54198 1017 aaPredicted RBP6.54□□□□□ -1.36
SDCBP-207ENST00000520168 PPP4CP60510 307 aa6.54□□□□□ -1.36
SDCBP-207ENST00000520168 NBR1Q14596 966 aa6.54□□□□□ -1.36
SDCBP-207ENST00000520168 DPP8Q6V1X1 898 aaPredicted RBP6.54□□□□□ -1.36
SDCBP-207ENST00000520168 PPP1R42Q7Z4L9 355 aa6.54□□□□□ -1.36
SDCBP-207ENST00000520168 IL17REQ8NFR9 667 aa6.54□□□□□ -1.36
SDCBP-207ENST00000520168 TRPM4Q8TD43 1214 aa6.54□□□□□ -1.36
SDCBP-207ENST00000520168 NLRP3Q96P20 1036 aa6.54□□□□□ -1.36
SDCBP-207ENST00000520168 CFHR5Q9BXR6 569 aa6.54□□□□□ -1.36
SDCBP-207ENST00000520168 USP16Q9Y5T5 823 aa6.54□□□□□ -1.36
SDCBP-207ENST00000520168 UNC80Q8N2C7 3258 aa6.53□□□□□ -1.36
SDCBP-207ENST00000520168 ZNF609O15014 1411 aa6.53□□□□□ -1.36
SDCBP-207ENST00000520168 SPDYE16A6NNV3 312 aaPredicted RBP6.53□□□□□ -1.36
SDCBP-207ENST00000520168 BBOX1O75936 387 aa6.53□□□□□ -1.36
SDCBP-207ENST00000520168 PDIA6Q15084 440 aa6.53□□□□□ -1.36
SDCBP-207ENST00000520168 PARP10Q53GL7 1025 aa6.53□□□□□ -1.36
SDCBP-207ENST00000520168 KIF6Q6ZMV9 814 aa6.53□□□□□ -1.36
SDCBP-207ENST00000520168 NUTM1Q86Y26 1132 aa6.53□□□□□ -1.36
SDCBP-207ENST00000520168 RASAL3Q86YV0 1011 aa6.53□□□□□ -1.36
SDCBP-207ENST00000520168 SULF1Q8IWU6 871 aa6.53□□□□□ -1.36
SDCBP-207ENST00000520168 SP8Q8IXZ3 490 aa6.53□□□□□ -1.36
SDCBP-207ENST00000520168 ZNF296Q8WUU4 475 aaPredicted RBP6.53□□□□□ -1.36
SDCBP-207ENST00000520168 NECTIN2Q92692 538 aa6.53□□□□□ -1.36
SDCBP-207ENST00000520168 POLR3GLQ9BT43 218 aa6.53□□□□□ -1.36
SDCBP-207ENST00000520168 TIMELESSQ9UNS1 1208 aa6.53□□□□□ -1.36
SDCBP-207ENST00000520168 DUOX1Q9NRD9 1551 aa6.52□□□□□ -1.36
SDCBP-207ENST00000520168 MAP3K15Q6ZN16 1313 aa6.52□□□□□ -1.37
SDCBP-207ENST00000520168 DLG5Q8TDM6 1919 aa6.52□□□□□ -1.37
SDCBP-207ENST00000520168 GPR25O00155 361 aa6.52□□□□□ -1.37
SDCBP-207ENST00000520168 RAD17O75943 681 aa6.52□□□□□ -1.37
SDCBP-207ENST00000520168 PIP4K2AP48426 406 aaPredicted RBP6.52□□□□□ -1.37
SDCBP-207ENST00000520168 SREBF2Q12772 1141 aa6.52□□□□□ -1.37
SDCBP-207ENST00000520168 HLFQ16534 295 aa6.52□□□□□ -1.37
SDCBP-207ENST00000520168 TSR1Q2NL82 804 aaKnown RBP6.52□□□□□ -1.37
SDCBP-207ENST00000520168 MPNDQ8N594 471 aa6.52□□□□□ -1.37
SDCBP-207ENST00000520168 COL3A1P02461 1466 aaPredicted RBP6.52□□□□□ -1.37
SDCBP-207ENST00000520168 ABCC4O15439 1325 aa6.51□□□□□ -1.37
SDCBP-207ENST00000520168 PITPNM2Q9BZ72 1349 aa6.51□□□□□ -1.37
SDCBP-207ENST00000520168 NBPF26B4DH59 902 aa6.51□□□□□ -1.37
SDCBP-207ENST00000520168 DLL1O00548 723 aa6.51□□□□□ -1.37
SDCBP-207ENST00000520168 FKTNO75072 461 aa6.51□□□□□ -1.37
SDCBP-207ENST00000520168 NTSR2O95665 410 aa6.51□□□□□ -1.37
SDCBP-207ENST00000520168 ALDH1A1P00352 501 aa6.51□□□□□ -1.37
SDCBP-207ENST00000520168 TM4SF4P48230 202 aa6.51□□□□□ -1.37
SDCBP-207ENST00000520168 NBPF10Q6P3W6 841 aaKnown RBP6.51□□□□□ -1.37
SDCBP-207ENST00000520168 SAMD7Q7Z3H4 446 aa6.51□□□□□ -1.37
SDCBP-207ENST00000520168 RTF1Q92541 710 aaKnown RBP6.51□□□□□ -1.37
SDCBP-207ENST00000520168 CDCA7LQ96GN5 454 aa6.51□□□□□ -1.37
SDCBP-207ENST00000520168 SCN9AQ15858 1988 aa6.51□□□□□ -1.37
SDCBP-207ENST00000520168 UBN2Q6ZU65 1347 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 ECM29Q5VYK3 1845 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms