RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-210ENST00000519362 ZAP70P43403 619 aa14.73□□□□□ -0.05
SPIDR-210ENST00000519362 VPS72Q15906 364 aa14.73□□□□□ -0.05
SPIDR-210ENST00000519362 UTP14AQ9BVJ6 771 aaKnown RBP14.73□□□□□ -0.05
SPIDR-210ENST00000519362 NSFL1CQ9UNZ2 370 aaKnown RBP14.73□□□□□ -0.05
SPIDR-210ENST00000519362 AKAP11Q9UKA4 1901 aa14.72□□□□□ -0.05
SPIDR-210ENST00000519362 DDX60Q8IY21 1712 aaKnown RBP14.72□□□□□ -0.05
SPIDR-210ENST00000519362 HMGB1P09429 215 aaKnown RBP14.72□□□□□ -0.05
SPIDR-210ENST00000519362 MCAMP43121 646 aa14.72□□□□□ -0.05
SPIDR-210ENST00000519362 MROH5Q6ZUA9 1318 aa14.72□□□□□ -0.05
SPIDR-210ENST00000519362 FGFR2P21802 821 aa14.71□□□□□ -0.05
SPIDR-210ENST00000519362 FAM98CQ17RN3 349 aaKnown RBP14.71□□□□□ -0.05
SPIDR-210ENST00000519362 TMEM63CQ9P1W3 806 aa14.71□□□□□ -0.05
SPIDR-210ENST00000519362 ATP6V1DQ9Y5K8 247 aa14.71□□□□□ -0.05
SPIDR-210ENST00000519362 ARAP2Q8WZ64 1704 aa14.71□□□□□ -0.05
SPIDR-210ENST00000519362 LAMA4Q16363 1823 aa14.71□□□□□ -0.05
SPIDR-210ENST00000519362 LAMB2P55268 1798 aa14.71□□□□□ -0.05
SPIDR-210ENST00000519362 BCORQ6W2J9 1755 aa14.71□□□□□ -0.05
SPIDR-210ENST00000519362 FOXP2O15409 715 aa14.71□□□□□ -0.06
SPIDR-210ENST00000519362 NTSR2O95665 410 aa14.71□□□□□ -0.06
SPIDR-210ENST00000519362 HCLS1P14317 486 aaPredicted RBP14.71□□□□□ -0.06
SPIDR-210ENST00000519362 PI16Q6UXB8 463 aa14.71□□□□□ -0.06
SPIDR-210ENST00000519362 Q6ZUG5 572 aa14.71□□□□□ -0.06
SPIDR-210ENST00000519362 APPBP2Q92624 585 aa14.71□□□□□ -0.06
SPIDR-210ENST00000519362 RBM27Q9P2N5 1060 aaKnown RBP14.71□□□□□ -0.06
SPIDR-210ENST00000519362 RTL9Q8NET4 1388 aa14.71□□□□□ -0.06
SPIDR-210ENST00000519362 ARID4AP29374 1257 aaPredicted RBP14.7□□□□□ -0.06
SPIDR-210ENST00000519362 EXOSC10Q01780 885 aaKnown RBP14.7□□□□□ -0.06
SPIDR-210ENST00000519362 PUM3Q15397 648 aaKnown RBP14.7□□□□□ -0.06
SPIDR-210ENST00000519362 FOXD4L6Q3SYB3 417 aaPredicted RBP14.7□□□□□ -0.06
SPIDR-210ENST00000519362 FOXD4L3Q6VB84 417 aaPredicted RBP14.7□□□□□ -0.06
SPIDR-210ENST00000519362 DHX32Q7L7V1 743 aaKnown RBP14.7□□□□□ -0.06
SPIDR-210ENST00000519362 USP48Q86UV5 1035 aa14.7□□□□□ -0.06
SPIDR-210ENST00000519362 LPIN2Q92539 896 aa14.7□□□□□ -0.06
SPIDR-210ENST00000519362 GTF3C6Q969F1 213 aa14.7□□□□□ -0.06
SPIDR-210ENST00000519362 AGXT2Q9BYV1 514 aa14.7□□□□□ -0.06
SPIDR-210ENST00000519362 A0A0G2JLW4 131 aa14.69□□□□□ -0.06
SPIDR-210ENST00000519362 E7EWF7 191 aa14.69□□□□□ -0.06
SPIDR-210ENST00000519362 DTNBO60941 627 aa14.69□□□□□ -0.06
SPIDR-210ENST00000519362 FNBP4Q8N3X1 1017 aaPredicted RBP14.69□□□□□ -0.06
SPIDR-210ENST00000519362 C8orf37Q96NL8 207 aa14.69□□□□□ -0.06
SPIDR-210ENST00000519362 GDPD2Q9HCC8 539 aa14.69□□□□□ -0.06
SPIDR-210ENST00000519362 NIP7Q9Y221 180 aaKnown RBP eCLIP14.69□□□□□ -0.06
SPIDR-210ENST00000519362 MYH7P12883 1935 aa14.69□□□□□ -0.06
SPIDR-210ENST00000519362 HSP90B1P14625 803 aaKnown RBP14.69□□□□□ -0.06
SPIDR-210ENST00000519362 PDCP20941 246 aa14.69□□□□□ -0.06
SPIDR-210ENST00000519362 LARP1BQ659C4 914 aaKnown RBP14.69□□□□□ -0.06
SPIDR-210ENST00000519362 CCDC102BQ68D86 513 aa14.69□□□□□ -0.06
SPIDR-210ENST00000519362 CLEC4GQ6UXB4 293 aa14.69□□□□□ -0.06
SPIDR-210ENST00000519362 LINC00116Q8NCU8 138 aa14.69□□□□□ -0.06
SPIDR-210ENST00000519362 NGLY1Q96IV0 654 aa14.69□□□□□ -0.06
SPIDR-210ENST00000519362 PUS7LQ9H0K6 701 aaKnown RBP14.69□□□□□ -0.06
SPIDR-210ENST00000519362 CNPY2Q9Y2B0 182 aa14.69□□□□□ -0.06
SPIDR-210ENST00000519362 ATRNO75882 1429 aa14.68□□□□□ -0.06
SPIDR-210ENST00000519362 GADD45BO75293 160 aaPredicted RBP14.68□□□□□ -0.06
SPIDR-210ENST00000519362 TTF1Q15361 905 aaPredicted RBP14.68□□□□□ -0.06
SPIDR-210ENST00000519362 WASHC4Q2M389 1173 aa14.68□□□□□ -0.06
SPIDR-210ENST00000519362 CCDC152Q4G0S7 254 aa14.68□□□□□ -0.06
SPIDR-210ENST00000519362 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.68□□□□□ -0.063e-6■■■■■ 34.1
SPIDR-210ENST00000519362 ZNF652Q9Y2D9 606 aa14.68□□□□□ -0.06
SPIDR-210ENST00000519362 TCHHQ07283 1943 aa14.68□□□□□ -0.06
SPIDR-210ENST00000519362 FAM177BA6PVY3 158 aa14.67□□□□□ -0.06
SPIDR-210ENST00000519362 UQCRFS1P1P0C7P4 283 aa14.67□□□□□ -0.06
SPIDR-210ENST00000519362 ADD2P35612 726 aa14.67□□□□□ -0.06
SPIDR-210ENST00000519362 PHKA1P46020 1223 aa14.67□□□□□ -0.06
SPIDR-210ENST00000519362 STK3Q13188 491 aa14.67□□□□□ -0.06
SPIDR-210ENST00000519362 TTLL5Q6EMB2 1281 aa14.67□□□□□ -0.06
SPIDR-210ENST00000519362 ZSCAN25Q6NSZ9 544 aa14.67□□□□□ -0.06
SPIDR-210ENST00000519362 FBXL16Q8N461 479 aa14.67□□□□□ -0.06
SPIDR-210ENST00000519362 BRF1Q92994 677 aa14.67□□□□□ -0.06
SPIDR-210ENST00000519362 SEC31BQ9NQW1 1179 aa14.67□□□□□ -0.06
SPIDR-210ENST00000519362 CTNNA3Q9UI47 895 aa14.67□□□□□ -0.06
SPIDR-210ENST00000519362 VPS37CA5D8V6 355 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-210ENST00000519362 RGL2O15211 777 aa14.66□□□□□ -0.06
SPIDR-210ENST00000519362 PFKFB2O60825 505 aa14.66□□□□□ -0.06
SPIDR-210ENST00000519362 MPHOSPH8Q99549 860 aa14.66□□□□□ -0.06
SPIDR-210ENST00000519362 CNTNAP4Q9C0A0 1308 aa14.66□□□□□ -0.06
SPIDR-210ENST00000519362 GPAA1O43292 621 aa14.66□□□□□ -0.06
SPIDR-210ENST00000519362 FGAP02671 866 aa14.66□□□□□ -0.06
SPIDR-210ENST00000519362 UBE3CQ15386 1083 aa14.66□□□□□ -0.06
SPIDR-210ENST00000519362 HELBQ8NG08 1087 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-210ENST00000519362 LRRC2Q9BYS8 371 aa14.66□□□□□ -0.06
SPIDR-210ENST00000519362 PIH1D3Q9NQM4 214 aaKnown RBP14.66□□□□□ -0.06
SPIDR-210ENST00000519362 THSD7AQ9UPZ6 1657 aa14.65□□□□□ -0.06
SPIDR-210ENST00000519362 SLC5A1P13866 664 aa14.65□□□□□ -0.06
SPIDR-210ENST00000519362 DNM1Q05193 864 aaKnown RBP14.65□□□□□ -0.06
SPIDR-210ENST00000519362 SCRN1Q12765 414 aa14.65□□□□□ -0.06
SPIDR-210ENST00000519362 IMMTQ16891 758 aaKnown RBP14.65□□□□□ -0.06
SPIDR-210ENST00000519362 LRSAM1Q6UWE0 723 aa14.65□□□□□ -0.06
SPIDR-210ENST00000519362 CDC37L1Q7L3B6 337 aa14.65□□□□□ -0.06
SPIDR-210ENST00000519362 SMARCC2Q8TAQ2 1214 aa14.65□□□□□ -0.06
SPIDR-210ENST00000519362 LLPHQ9BRT6 129 aaKnown RBP14.65□□□□□ -0.06
SPIDR-210ENST00000519362 SYCE3A1L190 88 aa14.64□□□□□ -0.07
SPIDR-210ENST00000519362 NASPP49321 788 aaPredicted RBP14.64□□□□□ -0.07
SPIDR-210ENST00000519362 UBE2HP62256 183 aa14.64□□□□□ -0.07
SPIDR-210ENST00000519362 SLC9C2Q5TAH2 1124 aa14.64□□□□□ -0.07
SPIDR-210ENST00000519362 SYAP1Q96A49 352 aaPredicted RBP14.64□□□□□ -0.07
SPIDR-210ENST00000519362 TCRBV5S4A2TA0A5A2 114 aa14.64□□□□□ -0.07
SPIDR-210ENST00000519362 JAK2O60674 1132 aa14.64□□□□□ -0.07
SPIDR-210ENST00000519362 IGHMBP2P38935 993 aaKnown RBP14.64□□□□□ -0.07
SPIDR-210ENST00000519362 EVCP57679 992 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms