RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 LRRC24Q50LG9 513 aa23.37■■□□□ 1.33
FAM49B-208ENST00000518344 RIPOR2Q9Y4F9 1068 aa23.37■■□□□ 1.33
FAM49B-208ENST00000518344 USP17L3A6NCW0 530 aa23.36■■□□□ 1.33
FAM49B-208ENST00000518344 USP17L4A6NCW7 530 aa23.36■■□□□ 1.33
FAM49B-208ENST00000518344 GNAI3P08754 354 aa23.36■■□□□ 1.33
FAM49B-208ENST00000518344 HTRA3P83110 453 aa23.36■■□□□ 1.33
FAM49B-208ENST00000518344 USP17L1Q7RTZ2 530 aa23.36■■□□□ 1.33
FAM49B-208ENST00000518344 CNTROBQ8N137 903 aa23.36■■□□□ 1.33
FAM49B-208ENST00000518344 RSBN1LQ6PCB5 846 aaPredicted RBP23.35■■□□□ 1.33
FAM49B-208ENST00000518344 TMEM57Q8N5G2 664 aa23.35■■□□□ 1.33
FAM49B-208ENST00000518344 MROH5Q6ZUA9 1318 aa23.34■■□□□ 1.33
FAM49B-208ENST00000518344 METTL24Q5JXM2 366 aa23.34■■□□□ 1.33
FAM49B-208ENST00000518344 SAMD7Q7Z3H4 446 aa23.34■■□□□ 1.33
FAM49B-208ENST00000518344 FTSJ3Q8IY81 847 aaKnown RBP23.34■■□□□ 1.33
FAM49B-208ENST00000518344 RFX5P48382 616 aaPredicted RBP23.33■■□□□ 1.33
FAM49B-208ENST00000518344 RBM26Q5T8P6 1007 aaKnown RBP23.33■■□□□ 1.33
FAM49B-208ENST00000518344 TRPM4Q8TD43 1214 aa23.33■■□□□ 1.33
FAM49B-208ENST00000518344 CD209Q9NNX6 404 aa23.33■■□□□ 1.33
FAM49B-208ENST00000518344 ITGBL1O95965 494 aaPredicted RBP23.32■■□□□ 1.32
FAM49B-208ENST00000518344 HIRAP54198 1017 aaPredicted RBP23.32■■□□□ 1.32
FAM49B-208ENST00000518344 TBC1D10BQ4KMP7 808 aaPredicted RBP23.32■■□□□ 1.32
FAM49B-208ENST00000518344 C15orf52Q6ZUT6 534 aaKnown RBP23.32■■□□□ 1.32
FAM49B-208ENST00000518344 ZNF804AQ7Z570 1209 aa23.32■■□□□ 1.32
FAM49B-208ENST00000518344 DZIP1LQ8IYY4 767 aaKnown RBP23.32■■□□□ 1.32
FAM49B-208ENST00000518344 AGBL3Q8NEM8 1001 aa23.32■■□□□ 1.32
FAM49B-208ENST00000518344 PTPN12Q05209 780 aaKnown RBP23.31■■□□□ 1.32
FAM49B-208ENST00000518344 UBE4AQ14139 1066 aa23.31■■□□□ 1.32
FAM49B-208ENST00000518344 TTLL5Q6EMB2 1281 aa23.31■■□□□ 1.32
FAM49B-208ENST00000518344 MXD3Q9BW11 206 aa23.31■■□□□ 1.32
FAM49B-208ENST00000518344 IRS2Q9Y4H2 1338 aa23.31■■□□□ 1.32
FAM49B-208ENST00000518344 EYA2O00167 538 aa23.3■■□□□ 1.32
FAM49B-208ENST00000518344 GTF2IP78347 998 aa23.3■■□□□ 1.32
FAM49B-208ENST00000518344 DACT2Q5SW24 774 aa23.3■■□□□ 1.32
FAM49B-208ENST00000518344 STRIP1Q5VSL9 837 aa23.3■■□□□ 1.32
FAM49B-208ENST00000518344 SIL1Q9H173 461 aa23.3■■□□□ 1.32
FAM49B-208ENST00000518344 GNAI2P04899 355 aa23.29■■□□□ 1.32
FAM49B-208ENST00000518344 ITPRIPQ8IWB1 547 aa23.29■■□□□ 1.32
FAM49B-208ENST00000518344 PASKQ96RG2 1323 aa23.29■■□□□ 1.32
FAM49B-208ENST00000518344 ADAMTSL1Q8N6G6 1762 aa23.28■■□□□ 1.32
FAM49B-208ENST00000518344 PDE8BO95263 885 aa23.28■■□□□ 1.32
FAM49B-208ENST00000518344 EGFRP00533 1210 aa23.28■■□□□ 1.32
FAM49B-208ENST00000518344 USP17L8P0C7I0 530 aa23.28■■□□□ 1.32
FAM49B-208ENST00000518344 GMLQ99445 158 aa23.28■■□□□ 1.32
FAM49B-208ENST00000518344 SCN9AQ15858 1988 aa23.28■■□□□ 1.32
FAM49B-208ENST00000518344 SRGAP3O43295 1099 aa23.27■■□□□ 1.32
FAM49B-208ENST00000518344 RLBP1P12271 317 aa23.27■■□□□ 1.32
FAM49B-208ENST00000518344 GYG1P46976 350 aa23.27■■□□□ 1.32
FAM49B-208ENST00000518344 ZC3H15Q8WU90 426 aaKnown RBP23.27■■□□□ 1.32
FAM49B-208ENST00000518344 PA2G4Q9UQ80 394 aaKnown RBP23.27■■□□□ 1.32
FAM49B-208ENST00000518344 IL1R1P14778 569 aa23.26■■□□□ 1.31
FAM49B-208ENST00000518344 HIBADHP31937 336 aaKnown RBP23.26■■□□□ 1.31
FAM49B-208ENST00000518344 ZNF280AP59817 542 aaPredicted RBP23.26■■□□□ 1.31
FAM49B-208ENST00000518344 KIF4BQ2VIQ3 1234 aa23.26■■□□□ 1.31
FAM49B-208ENST00000518344 VGLL2Q8N8G2 317 aa23.26■■□□□ 1.31
FAM49B-208ENST00000518344 FAM84BQ96KN1 310 aaPredicted RBP23.26■■□□□ 1.31
FAM49B-208ENST00000518344 PGAP2Q9UHJ9 254 aa23.26■■□□□ 1.31
FAM49B-208ENST00000518344 RCAN3Q9UKA8 241 aa23.26■■□□□ 1.31
FAM49B-208ENST00000518344 MYO3BQ8WXR4 1341 aa23.26■■□□□ 1.31
FAM49B-208ENST00000518344 FMR1Q06787 632 aaKnown RBP eCLIP23.25■■□□□ 1.312e-7■■■■■ 29.4
FAM49B-208ENST00000518344 ATG9AQ7Z3C6 839 aa23.25■■□□□ 1.31
FAM49B-208ENST00000518344 VPS37DQ86XT2 251 aa23.25■■□□□ 1.31
FAM49B-208ENST00000518344 DNAJC5GQ8N7S2 189 aa23.25■■□□□ 1.31
FAM49B-208ENST00000518344 PANK1Q8TE04 598 aa23.25■■□□□ 1.31
FAM49B-208ENST00000518344 JAG2Q9Y219 1238 aa23.25■■□□□ 1.31
FAM49B-208ENST00000518344 TRAF5O00463 557 aa23.24■■□□□ 1.31
FAM49B-208ENST00000518344 CIAO1O76071 339 aa23.24■■□□□ 1.31
FAM49B-208ENST00000518344 PUM3Q15397 648 aaKnown RBP23.24■■□□□ 1.31
FAM49B-208ENST00000518344 KIAA0825Q8IV33 1275 aa23.24■■□□□ 1.31
FAM49B-208ENST00000518344 OGFOD1Q8N543 542 aa23.24■■□□□ 1.31
FAM49B-208ENST00000518344 YTHDC1Q96MU7 727 aaKnown RBP23.24■■□□□ 1.31
FAM49B-208ENST00000518344 GLIS2Q9BZE0 524 aaPredicted RBP23.24■■□□□ 1.31
FAM49B-208ENST00000518344 MYOZ2Q9NPC6 264 aa23.24■■□□□ 1.31
FAM49B-208ENST00000518344 COPRSQ9NQ92 184 aa23.24■■□□□ 1.31
FAM49B-208ENST00000518344 CREBZFQ9NS37 354 aa23.24■■□□□ 1.31
FAM49B-208ENST00000518344 FBXO3Q9UK99 471 aa23.24■■□□□ 1.31
FAM49B-208ENST00000518344 TMEM88BA6NKF7 163 aa23.23■■□□□ 1.31
FAM49B-208ENST00000518344 IFIT1P09914 478 aaKnown RBP23.23■■□□□ 1.31
FAM49B-208ENST00000518344 IL15P40933 162 aaPredicted RBP23.23■■□□□ 1.31
FAM49B-208ENST00000518344 CAVIN4Q5BKX8 364 aa23.23■■□□□ 1.31
FAM49B-208ENST00000518344 CEP126Q9P2H0 1117 aa23.23■■□□□ 1.31
FAM49B-208ENST00000518344 ZNF609O15014 1411 aa23.23■■□□□ 1.31
FAM49B-208ENST00000518344 A0A1B0GUL6 1792 aa23.22■■□□□ 1.31
FAM49B-208ENST00000518344 SASH1O94885 1247 aa23.22■■□□□ 1.31
FAM49B-208ENST00000518344 MS4A1P11836 297 aa23.22■■□□□ 1.31
FAM49B-208ENST00000518344 MTX1Q13505 466 aa23.22■■□□□ 1.31
FAM49B-208ENST00000518344 SCARF1Q14162 830 aa23.22■■□□□ 1.31
FAM49B-208ENST00000518344 CDC37L1Q7L3B6 337 aa23.22■■□□□ 1.31
FAM49B-208ENST00000518344 FBXO33Q7Z6M2 555 aa23.22■■□□□ 1.31
FAM49B-208ENST00000518344 USP48Q86UV5 1035 aa23.22■■□□□ 1.31
FAM49B-208ENST00000518344 TDRD7Q8NHU6 1098 aaKnown RBP23.22■■□□□ 1.31
FAM49B-208ENST00000518344 DCPSQ96C86 337 aaKnown RBP23.22■■□□□ 1.31
FAM49B-208ENST00000518344 ZBTB7BO15156 539 aaPredicted RBP23.21■■□□□ 1.31
FAM49B-208ENST00000518344 SLC5A1P13866 664 aa23.21■■□□□ 1.31
FAM49B-208ENST00000518344 FGFR2P21802 821 aa23.21■■□□□ 1.31
FAM49B-208ENST00000518344 LPIN2Q92539 896 aa23.21■■□□□ 1.31
FAM49B-208ENST00000518344 KLRG1Q96E93 195 aa23.21■■□□□ 1.31
FAM49B-208ENST00000518344 C1orf115Q9H7X2 142 aa23.21■■□□□ 1.31
FAM49B-208ENST00000518344 HDAC9Q9UKV0 1011 aa23.21■■□□□ 1.31
FAM49B-208ENST00000518344 IQSEC3Q9UPP2 1182 aaPredicted RBP23.21■■□□□ 1.31
FAM49B-208ENST00000518344 ASTN2O75129 1339 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms