RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 GGA3Q9NZ52 723 aa11.13□□□□□ -0.63
PABPC1-202ENST00000517403 MINPP1Q9UNW1 487 aa11.13□□□□□ -0.63
PABPC1-202ENST00000517403 PCDHAC2Q9Y5I4 1007 aa11.13□□□□□ -0.63
PABPC1-202ENST00000517403 ARAP2Q8WZ64 1704 aa11.12□□□□□ -0.63
PABPC1-202ENST00000517403 SSC5DA1L4H1 1573 aa11.12□□□□□ -0.63
PABPC1-202ENST00000517403 FOXO4P98177 505 aa11.12□□□□□ -0.63
PABPC1-202ENST00000517403 CALD1Q05682 793 aaKnown RBP11.12□□□□□ -0.63
PABPC1-202ENST00000517403 KIF4BQ2VIQ3 1234 aa11.12□□□□□ -0.63
PABPC1-202ENST00000517403 RBM26Q5T8P6 1007 aaKnown RBP11.12□□□□□ -0.63
PABPC1-202ENST00000517403 KAZALD1Q96I82 304 aa11.12□□□□□ -0.63
PABPC1-202ENST00000517403 BCL2L13Q9BXK5 485 aa11.12□□□□□ -0.63
PABPC1-202ENST00000517403 PAPPA2Q9BXP8 1791 aa11.12□□□□□ -0.63
PABPC1-202ENST00000517403 MED23Q9ULK4 1368 aa11.12□□□□□ -0.63
PABPC1-202ENST00000517403 TNIP1Q15025 636 aa11.11□□□□□ -0.63
PABPC1-202ENST00000517403 CCDC152Q4G0S7 254 aa11.11□□□□□ -0.63
PABPC1-202ENST00000517403 BEND3Q5T5X7 828 aa11.11□□□□□ -0.63
PABPC1-202ENST00000517403 MOB2Q70IA6 237 aa11.11□□□□□ -0.63
PABPC1-202ENST00000517403 ANKRD18AQ8IVF6 992 aa11.11□□□□□ -0.63
PABPC1-202ENST00000517403 DPF2Q92785 391 aa11.11□□□□□ -0.63
PABPC1-202ENST00000517403 PLA2G12BQ9BX93 195 aa11.11□□□□□ -0.63
PABPC1-202ENST00000517403 GGA1Q9UJY5 639 aa11.11□□□□□ -0.63
PABPC1-202ENST00000517403 XDHP47989 1333 aa11.1□□□□□ -0.63
PABPC1-202ENST00000517403 OTOFQ9HC10 1997 aa11.1□□□□□ -0.63
PABPC1-202ENST00000517403 CASP8AP2Q9UKL3 1982 aa11.1□□□□□ -0.63
PABPC1-202ENST00000517403 ECM29Q5VYK3 1845 aa11.1□□□□□ -0.63
PABPC1-202ENST00000517403 CSF1RP07333 972 aa11.1□□□□□ -0.63
PABPC1-202ENST00000517403 ZNF280AP59817 542 aaPredicted RBP11.1□□□□□ -0.63
PABPC1-202ENST00000517403 DACT2Q5SW24 774 aa11.1□□□□□ -0.63
PABPC1-202ENST00000517403 PRAMEF18Q5VWM3 479 aa11.1□□□□□ -0.63
PABPC1-202ENST00000517403 CERS5Q8N5B7 392 aa11.1□□□□□ -0.63
PABPC1-202ENST00000517403 DNAAF4Q8WXU2 420 aa11.1□□□□□ -0.63
PABPC1-202ENST00000517403 ANKIB1Q9P2G1 1089 aa11.1□□□□□ -0.63
PABPC1-202ENST00000517403 SSUH2Q9Y2M2 353 aa11.1□□□□□ -0.63
PABPC1-202ENST00000517403 SPDYE2BA6NHP3 402 aa11.09□□□□□ -0.63
PABPC1-202ENST00000517403 SPDYE6P0CI01 402 aa11.09□□□□□ -0.63
PABPC1-202ENST00000517403 ITGA6P23229 1130 aa11.09□□□□□ -0.63
PABPC1-202ENST00000517403 CCT4P50991 539 aaKnown RBP11.09□□□□□ -0.63
PABPC1-202ENST00000517403 FKBP5Q13451 457 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-202ENST00000517403 SPDYE2Q495Y8 402 aa11.09□□□□□ -0.63
PABPC1-202ENST00000517403 RSBN1LQ6PCB5 846 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-202ENST00000517403 KRT26Q7Z3Y9 468 aa11.09□□□□□ -0.63
PABPC1-202ENST00000517403 HS6ST3Q8IZP7 471 aa11.09□□□□□ -0.63
PABPC1-202ENST00000517403 FAM9BQ8IZU0 186 aa11.09□□□□□ -0.63
PABPC1-202ENST00000517403 HELBQ8NG08 1087 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-202ENST00000517403 ZNF594Q96JF6 807 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-202ENST00000517403 PRDM10Q9NQV6 1147 aa11.09□□□□□ -0.63
PABPC1-202ENST00000517403 BSDC1Q9NW68 430 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-202ENST00000517403 LAMB1P07942 1786 aa11.08□□□□□ -0.64
PABPC1-202ENST00000517403 DDX58O95786 925 aaKnown RBP11.08□□□□□ -0.64
PABPC1-202ENST00000517403 CTCFP49711 727 aaPredicted RBP11.08□□□□□ -0.64
PABPC1-202ENST00000517403 NBPF9Q3BBW0 867 aa11.08□□□□□ -0.64
PABPC1-202ENST00000517403 ANGEL2Q5VTE6 544 aaKnown RBP11.08□□□□□ -0.64
PABPC1-202ENST00000517403 CDC37L1Q7L3B6 337 aa11.08□□□□□ -0.64
PABPC1-202ENST00000517403 WDR63Q8IWG1 891 aa11.08□□□□□ -0.64
PABPC1-202ENST00000517403 LINS1Q8NG48 757 aa11.08□□□□□ -0.64
PABPC1-202ENST00000517403 ZC3H15Q8WU90 426 aaKnown RBP11.08□□□□□ -0.64
PABPC1-202ENST00000517403 CDCA5Q96FF9 252 aa11.08□□□□□ -0.64
PABPC1-202ENST00000517403 STK31Q9BXU1 1019 aa11.08□□□□□ -0.64
PABPC1-202ENST00000517403 FZD1Q9UP38 647 aa11.08□□□□□ -0.64
PABPC1-202ENST00000517403 TAF5LO75529 589 aa11.07□□□□□ -0.64
PABPC1-202ENST00000517403 SASH1O94885 1247 aa11.07□□□□□ -0.64
PABPC1-202ENST00000517403 RPS12P25398 132 aaKnown RBP11.07□□□□□ -0.64
PABPC1-202ENST00000517403 CHRNDQ07001 517 aa11.07□□□□□ -0.64
PABPC1-202ENST00000517403 SUCLG2Q96I99 432 aa11.07□□□□□ -0.64
PABPC1-202ENST00000517403 EYA3Q99504 573 aa11.07□□□□□ -0.64
PABPC1-202ENST00000517403 ZC3H12CQ9C0D7 883 aaKnown RBP11.07□□□□□ -0.64
PABPC1-202ENST00000517403 TMX4Q9H1E5 349 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-202ENST00000517403 JAG2Q9Y219 1238 aa11.07□□□□□ -0.64
PABPC1-202ENST00000517403 GTF3C3Q9Y5Q9 886 aa11.07□□□□□ -0.64
PABPC1-202ENST00000517403 H7C1D1 291 aa11.06□□□□□ -0.64
PABPC1-202ENST00000517403 ANP32CO43423 234 aa11.06□□□□□ -0.64
PABPC1-202ENST00000517403 ATP2B4P23634 1241 aa11.06□□□□□ -0.64
PABPC1-202ENST00000517403 SCARF1Q14162 830 aa11.06□□□□□ -0.64
PABPC1-202ENST00000517403 CDCA7LQ96GN5 454 aa11.06□□□□□ -0.64
PABPC1-202ENST00000517403 ZBED3Q96IU2 234 aaPredicted RBP11.06□□□□□ -0.64
PABPC1-202ENST00000517403 PUS3Q9BZE2 481 aaKnown RBP11.06□□□□□ -0.64
PABPC1-202ENST00000517403 MYOZ2Q9NPC6 264 aa11.06□□□□□ -0.64
PABPC1-202ENST00000517403 USP17L3A6NCW0 530 aa11.05□□□□□ -0.64
PABPC1-202ENST00000517403 USP17L4A6NCW7 530 aa11.05□□□□□ -0.64
PABPC1-202ENST00000517403 NBPF7P0C2Y1 421 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-202ENST00000517403 HUNKP57058 714 aa11.05□□□□□ -0.64
PABPC1-202ENST00000517403 GRIK5Q16478 980 aa11.05□□□□□ -0.64
PABPC1-202ENST00000517403 USP17L1Q7RTZ2 530 aa11.05□□□□□ -0.64
PABPC1-202ENST00000517403 ANKRD44Q8N8A2 993 aa11.05□□□□□ -0.64
PABPC1-202ENST00000517403 RNF25Q96BH1 459 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-202ENST00000517403 CDC5LQ99459 802 aaKnown RBP11.05□□□□□ -0.64
PABPC1-202ENST00000517403 GBA2Q9HCG7 927 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-202ENST00000517403 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-202ENST00000517403 COL1A1P02452 1464 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-202ENST00000517403 ZNF804BA4D1E1 1349 aa11.05□□□□□ -0.64
PABPC1-202ENST00000517403 WNT10BO00744 389 aa11.04□□□□□ -0.64
PABPC1-202ENST00000517403 SLC10A3P09131 477 aa11.04□□□□□ -0.64
PABPC1-202ENST00000517403 NEXNQ0ZGT2 675 aa11.04□□□□□ -0.64
PABPC1-202ENST00000517403 LMBR1LQ6UX01 489 aa11.04□□□□□ -0.64
PABPC1-202ENST00000517403 RASAL3Q86YV0 1011 aa11.04□□□□□ -0.64
PABPC1-202ENST00000517403 CDAN1Q8IWY9 1227 aa11.04□□□□□ -0.64
PABPC1-202ENST00000517403 MRPL50Q8N5N7 158 aaKnown RBP11.04□□□□□ -0.64
PABPC1-202ENST00000517403 AGBL3Q8NEM8 1001 aa11.04□□□□□ -0.64
PABPC1-202ENST00000517403 HHIPL1Q96JK4 782 aa11.04□□□□□ -0.64
PABPC1-202ENST00000517403 GRM8O00222 908 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms