RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 CAVIN1Q6NZI2 390 aaKnown RBP23.47■■□□□ 1.35
HOXA11-202ENST00000517402 SNAP23O00161 211 aa23.46■■□□□ 1.35
HOXA11-202ENST00000517402 STX6O43752 255 aa23.46■■□□□ 1.35
HOXA11-202ENST00000517402 KRT32Q14532 448 aa23.46■■□□□ 1.35
HOXA11-202ENST00000517402 DSCC1Q9BVC3 393 aa23.46■■□□□ 1.35
HOXA11-202ENST00000517402 GDPD2Q9HCC8 539 aa23.46■■□□□ 1.35
HOXA11-202ENST00000517402 NSFL1CQ9UNZ2 370 aaKnown RBP23.46■■□□□ 1.35
HOXA11-202ENST00000517402 COL4A1P02462 1669 aa23.46■■□□□ 1.35
HOXA11-202ENST00000517402 STK3Q13188 491 aa23.45■■□□□ 1.35
HOXA11-202ENST00000517402 WASHC4Q2M389 1173 aa23.45■■□□□ 1.35
HOXA11-202ENST00000517402 LRRC2Q9BYS8 371 aa23.45■■□□□ 1.35
HOXA11-202ENST00000517402 PANK2Q9BZ23 570 aa23.45■■□□□ 1.35
HOXA11-202ENST00000517402 ABCC12Q96J65 1359 aa23.45■■□□□ 1.34
HOXA11-202ENST00000517402 LAMB2P55268 1798 aa23.45■■□□□ 1.34
HOXA11-202ENST00000517402 PARP10Q53GL7 1025 aa23.44■■□□□ 1.34
HOXA11-202ENST00000517402 FNBP4Q8N3X1 1017 aaPredicted RBP23.44■■□□□ 1.34
HOXA11-202ENST00000517402 ZSCAN22P10073 491 aaPredicted RBP23.44■■□□□ 1.34
HOXA11-202ENST00000517402 PHKA1P46020 1223 aa23.44■■□□□ 1.34
HOXA11-202ENST00000517402 ANKRD1Q15327 319 aa23.44■■□□□ 1.34
HOXA11-202ENST00000517402 RBM27Q9P2N5 1060 aaKnown RBP23.44■■□□□ 1.34
HOXA11-202ENST00000517402 USP21Q9UK80 565 aa23.44■■□□□ 1.34
HOXA11-202ENST00000517402 BTAF1O14981 1849 aa23.43■■□□□ 1.34
HOXA11-202ENST00000517402 HSPA1LP34931 641 aa23.43■■□□□ 1.34
HOXA11-202ENST00000517402 TTLL5Q6EMB2 1281 aa23.43■■□□□ 1.34
HOXA11-202ENST00000517402 AK7Q96M32 723 aa23.43■■□□□ 1.34
HOXA11-202ENST00000517402 PUS7LQ9H0K6 701 aaKnown RBP23.43■■□□□ 1.34
HOXA11-202ENST00000517402 ZNF831Q5JPB2 1677 aa23.43■■□□□ 1.34
HOXA11-202ENST00000517402 ARAP2Q8WZ64 1704 aa23.43■■□□□ 1.34
HOXA11-202ENST00000517402 FOXP2O15409 715 aa23.42■■□□□ 1.34
HOXA11-202ENST00000517402 CCDC102BQ68D86 513 aa23.42■■□□□ 1.34
HOXA11-202ENST00000517402 Q6ZUG5 572 aa23.42■■□□□ 1.34
HOXA11-202ENST00000517402 ALDH8A1Q9H2A2 487 aaPredicted RBP23.42■■□□□ 1.34
HOXA11-202ENST00000517402 EP400Q96L91 3159 aa23.42■■□□□ 1.34
HOXA11-202ENST00000517402 PUM3Q15397 648 aaKnown RBP23.42■■□□□ 1.34
HOXA11-202ENST00000517402 TICAM2Q86XR7 235 aa23.42■■□□□ 1.34
HOXA11-202ENST00000517402 MPHOSPH8Q99549 860 aa23.41■■□□□ 1.34
HOXA11-202ENST00000517402 GRPEL1Q9HAV7 217 aa23.41■■□□□ 1.34
HOXA11-202ENST00000517402 MROH5Q6ZUA9 1318 aa23.41■■□□□ 1.34
HOXA11-202ENST00000517402 THSD7AQ9UPZ6 1657 aa23.41■■□□□ 1.34
HOXA11-202ENST00000517402 F13A1P00488 732 aa23.4■■□□□ 1.34
HOXA11-202ENST00000517402 FGFR2P21802 821 aa23.4■■□□□ 1.34
HOXA11-202ENST00000517402 CASZ1Q86V15 1759 aa23.4■■□□□ 1.34
HOXA11-202ENST00000517402 ZFYP08048 801 aaPredicted RBP23.39■■□□□ 1.34
HOXA11-202ENST00000517402 CCDC152Q4G0S7 254 aa23.39■■□□□ 1.34
HOXA11-202ENST00000517402 LPIN2Q92539 896 aa23.39■■□□□ 1.34
HOXA11-202ENST00000517402 PIH1D3Q9NQM4 214 aaKnown RBP23.39■■□□□ 1.34
HOXA11-202ENST00000517402 MTMR6Q9Y217 621 aa23.39■■□□□ 1.34
HOXA11-202ENST00000517402 ZNF652Q9Y2D9 606 aa23.39■■□□□ 1.34
HOXA11-202ENST00000517402 TAF1P21675 1872 aa23.39■■□□□ 1.34
HOXA11-202ENST00000517402 VPS37CA5D8V6 355 aaPredicted RBP23.39■■□□□ 1.33
HOXA11-202ENST00000517402 MRE11P49959 708 aa23.39■■□□□ 1.33
HOXA11-202ENST00000517402 LRRFIP1Q32MZ4 808 aaKnown RBP23.39■■□□□ 1.33
HOXA11-202ENST00000517402 ZSCAN23Q3MJ62 389 aa23.39■■□□□ 1.33
HOXA11-202ENST00000517402 BICDL1Q6ZP65 573 aa23.39■■□□□ 1.33
HOXA11-202ENST00000517402 APPBP2Q92624 585 aa23.39■■□□□ 1.33
HOXA11-202ENST00000517402 BRF1Q92994 677 aa23.39■■□□□ 1.33
HOXA11-202ENST00000517402 CNPY2Q9Y2B0 182 aa23.39■■□□□ 1.33
HOXA11-202ENST00000517402 E7EWF7 191 aa23.38■■□□□ 1.33
HOXA11-202ENST00000517402 C3orf67Q6ZVT6 689 aa23.38■■□□□ 1.33
HOXA11-202ENST00000517402 SCN7AQ01118 1682 aa23.38■■□□□ 1.33
HOXA11-202ENST00000517402 IDH1O75874 414 aaKnown RBP23.38■■□□□ 1.33
HOXA11-202ENST00000517402 HSP90B1P14625 803 aaKnown RBP23.38■■□□□ 1.33
HOXA11-202ENST00000517402 ARID4AP29374 1257 aaPredicted RBP23.38■■□□□ 1.33
HOXA11-202ENST00000517402 HAND2P61296 217 aa23.38■■□□□ 1.33
HOXA11-202ENST00000517402 ZNF512BQ96KM6 892 aaPredicted RBP23.38■■□□□ 1.33
HOXA11-202ENST00000517402 TMEM63CQ9P1W3 806 aa23.38■■□□□ 1.33
HOXA11-202ENST00000517402 GADD45BO75293 160 aaPredicted RBP23.37■■□□□ 1.33
HOXA11-202ENST00000517402 ERFEQ4G0M1 354 aa23.37■■□□□ 1.33
HOXA11-202ENST00000517402 CHST3Q7LGC8 479 aa23.37■■□□□ 1.33
HOXA11-202ENST00000517402 NHSQ6T4R5 1651 aa23.37■■□□□ 1.33
HOXA11-202ENST00000517402 GPAA1O43292 621 aa23.36■■□□□ 1.33
HOXA11-202ENST00000517402 SLC9C2Q5TAH2 1124 aa23.36■■□□□ 1.33
HOXA11-202ENST00000517402 USP48Q86UV5 1035 aa23.36■■□□□ 1.33
HOXA11-202ENST00000517402 CNTNAP4Q9C0A0 1308 aa23.36■■□□□ 1.33
HOXA11-202ENST00000517402 ADD2P35612 726 aa23.36■■□□□ 1.33
HOXA11-202ENST00000517402 FGD1P98174 961 aa23.36■■□□□ 1.33
HOXA11-202ENST00000517402 GTF3C6Q969F1 213 aa23.36■■□□□ 1.33
HOXA11-202ENST00000517402 SPATA31A6Q5VVP1 1343 aa23.35■■□□□ 1.33
HOXA11-202ENST00000517402 SLC5A1P13866 664 aa23.35■■□□□ 1.33
HOXA11-202ENST00000517402 IGHMBP2P38935 993 aaKnown RBP23.35■■□□□ 1.33
HOXA11-202ENST00000517402 CLEC4GQ6UXB4 293 aa23.35■■□□□ 1.33
HOXA11-202ENST00000517402 DHX32Q7L7V1 743 aaKnown RBP23.35■■□□□ 1.33
HOXA11-202ENST00000517402 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.35■■□□□ 1.33
HOXA11-202ENST00000517402 JAK2O60674 1132 aa23.35■■□□□ 1.33
HOXA11-202ENST00000517402 RASGRF1Q13972 1273 aa23.35■■□□□ 1.33
HOXA11-202ENST00000517402 LARP1BQ659C4 914 aaKnown RBP23.35■■□□□ 1.33
HOXA11-202ENST00000517402 CDC37L1Q7L3B6 337 aa23.35■■□□□ 1.33
HOXA11-202ENST00000517402 BCL2L12Q9HB09 334 aa23.35■■□□□ 1.33
HOXA11-202ENST00000517402 SRP68Q9UHB9 627 aaKnown RBP23.35■■□□□ 1.33
HOXA11-202ENST00000517402 WWC3Q9ULE0 1092 aa23.35■■□□□ 1.33
HOXA11-202ENST00000517402 ISY1Q9ULR0 285 aaKnown RBP23.35■■□□□ 1.33
HOXA11-202ENST00000517402 FGAP02671 866 aa23.34■■□□□ 1.33
HOXA11-202ENST00000517402 TPRNQ4KMQ1 711 aa23.34■■□□□ 1.33
HOXA11-202ENST00000517402 TBC1D9BQ66K14 1250 aa23.34■■□□□ 1.33
HOXA11-202ENST00000517402 AMIGO3Q86WK7 504 aa23.34■■□□□ 1.33
HOXA11-202ENST00000517402 HMGB1P09429 215 aaKnown RBP23.33■■□□□ 1.33
HOXA11-202ENST00000517402 RTL9Q8NET4 1388 aa23.33■■□□□ 1.33
HOXA11-202ENST00000517402 FIBPO43427 364 aa23.33■■□□□ 1.32
HOXA11-202ENST00000517402 EXOSC10Q01780 885 aaKnown RBP23.33■■□□□ 1.32
HOXA11-202ENST00000517402 CHRNDQ07001 517 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms