RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 SLC23A3Q6PIS1 610 aa1.83□□□□□ -2.12
RNU6-539P-201ENST00000516665 PAOXQ6QHF9 649 aa1.83□□□□□ -2.12
RNU6-539P-201ENST00000516665 CCDC125Q86Z20 511 aa1.83□□□□□ -2.12
RNU6-539P-201ENST00000516665 SCUBE1Q8IWY4 988 aa1.83□□□□□ -2.12
RNU6-539P-201ENST00000516665 PLD6Q8N2A8 252 aaKnown RBP1.83□□□□□ -2.12
RNU6-539P-201ENST00000516665 KIRREL1Q96J84 757 aa1.83□□□□□ -2.12
RNU6-539P-201ENST00000516665 ZBTB4Q9P1Z0 1013 aaPredicted RBP1.83□□□□□ -2.12
RNU6-539P-201ENST00000516665 PCDHB9Q9Y5E1 797 aa1.83□□□□□ -2.12
RNU6-539P-201ENST00000516665 GTF3C5Q9Y5Q8 519 aaPredicted RBP1.83□□□□□ -2.12
RNU6-539P-201ENST00000516665 ADAM11O75078 769 aa1.82□□□□□ -2.12
RNU6-539P-201ENST00000516665 AFMP43652 599 aa1.82□□□□□ -2.12
RNU6-539P-201ENST00000516665 INHBEP58166 350 aa1.82□□□□□ -2.12
RNU6-539P-201ENST00000516665 RNF20Q5VTR2 975 aa1.82□□□□□ -2.12
RNU6-539P-201ENST00000516665 TXNDC11Q6PKC3 985 aa1.82□□□□□ -2.12
RNU6-539P-201ENST00000516665 HFE2Q6ZVN8 426 aa1.82□□□□□ -2.12
RNU6-539P-201ENST00000516665 VOPP1Q96AW1 172 aa1.82□□□□□ -2.12
RNU6-539P-201ENST00000516665 CARD10Q9BWT7 1032 aa1.82□□□□□ -2.12
RNU6-539P-201ENST00000516665 BRIP1Q9BX63 1249 aa1.82□□□□□ -2.12
RNU6-539P-201ENST00000516665 NEUROD4Q9HD90 331 aa1.82□□□□□ -2.12
RNU6-539P-201ENST00000516665 CABP1Q9NZU7 370 aa1.82□□□□□ -2.12
RNU6-539P-201ENST00000516665 ZC3H12DA2A288 527 aaKnown RBP1.81□□□□□ -2.12
RNU6-539P-201ENST00000516665 C1QTNF3-AMACRE9PGA6 284 aa1.81□□□□□ -2.12
RNU6-539P-201ENST00000516665 NANOS3P60323 173 aaKnown RBP1.81□□□□□ -2.12
RNU6-539P-201ENST00000516665 FDX2Q6P4F2 183 aa1.81□□□□□ -2.12
RNU6-539P-201ENST00000516665 C7orf43Q8WVR3 580 aa1.81□□□□□ -2.12
RNU6-539P-201ENST00000516665 HSH2DQ96JZ2 352 aa1.81□□□□□ -2.12
RNU6-539P-201ENST00000516665 CDCA7Q9BWT1 371 aaPredicted RBP1.81□□□□□ -2.12
RNU6-539P-201ENST00000516665 IQSEC3Q9UPP2 1182 aaPredicted RBP1.81□□□□□ -2.12
RNU6-539P-201ENST00000516665 LINC01387J3KSC0 135 aa1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 MYCP01106 439 aaPredicted RBP1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 EIF2AK2P19525 551 aaKnown RBP1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 CRIP3Q6Q6R5 217 aa1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 KRI1Q8N9T8 703 aaKnown RBP1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 NETO1Q8TDF5 533 aa1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 EPS8L1Q8TE68 723 aa1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 FBLIM1Q8WUP2 373 aa1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 CCDC102AQ96A19 550 aa1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 PNMA5Q96PV4 448 aa1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 SLC26A8Q96RN1 970 aa1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 KRTAP3-1Q9BYR8 98 aa1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 GSX2Q9BZM3 304 aa1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 CNOT6Q9ULM6 557 aaKnown RBP1.8□□□□□ -2.12
RNU6-539P-201ENST00000516665 SFI1A8K8P3 1242 aa1.79□□□□□ -2.12
RNU6-539P-201ENST00000516665 EML1O00423 815 aa1.79□□□□□ -2.12
RNU6-539P-201ENST00000516665 PRKCQQ04759 706 aa1.79□□□□□ -2.12
RNU6-539P-201ENST00000516665 PCSK7Q16549 785 aa1.79□□□□□ -2.12
RNU6-539P-201ENST00000516665 ANGEL2Q5VTE6 544 aaKnown RBP1.79□□□□□ -2.12
RNU6-539P-201ENST00000516665 CDPF1Q6NVV7 123 aa1.79□□□□□ -2.12
RNU6-539P-201ENST00000516665 TRPM4Q8TD43 1214 aa1.79□□□□□ -2.12
RNU6-539P-201ENST00000516665 PLD4Q96BZ4 506 aa1.79□□□□□ -2.12
RNU6-539P-201ENST00000516665 BEGAINQ9BUH8 593 aa1.79□□□□□ -2.12
RNU6-539P-201ENST00000516665 LIMD1Q9UGP4 676 aa1.79□□□□□ -2.12
RNU6-539P-201ENST00000516665 VAV3Q9UKW4 847 aa1.79□□□□□ -2.12
RNU6-539P-201ENST00000516665 FZD7O75084 574 aa1.78□□□□□ -2.12
RNU6-539P-201ENST00000516665 SRFP11831 508 aa1.78□□□□□ -2.12
RNU6-539P-201ENST00000516665 SCNN1DP51172 638 aa1.78□□□□□ -2.12
RNU6-539P-201ENST00000516665 SMTNP53814 917 aa1.78□□□□□ -2.12
RNU6-539P-201ENST00000516665 GPLD1P80108 840 aa1.78□□□□□ -2.12
RNU6-539P-201ENST00000516665 DHX32Q7L7V1 743 aaKnown RBP1.78□□□□□ -2.12
RNU6-539P-201ENST00000516665 FAM181AQ8N9Y4 354 aa1.78□□□□□ -2.12
RNU6-539P-201ENST00000516665 ZDHHC1Q8WTX9 485 aa1.78□□□□□ -2.12
RNU6-539P-201ENST00000516665 RNF208Q9H0X6 261 aa1.78□□□□□ -2.12
RNU6-539P-201ENST00000516665 TRIM33Q9UPN9 1127 aa1.78□□□□□ -2.12
RNU6-539P-201ENST00000516665 PPME1Q9Y570 386 aa1.78□□□□□ -2.12
RNU6-539P-201ENST00000516665 KCTD3Q9Y597 815 aa1.78□□□□□ -2.12
RNU6-539P-201ENST00000516665 CYP27A1Q02318 531 aa1.77□□□□□ -2.13
RNU6-539P-201ENST00000516665 AOC3Q16853 763 aa1.77□□□□□ -2.13
RNU6-539P-201ENST00000516665 ZNF385BQ569K4 471 aa1.77□□□□□ -2.13
RNU6-539P-201ENST00000516665 USP51Q70EK9 711 aa1.77□□□□□ -2.13
RNU6-539P-201ENST00000516665 SPRED1Q7Z699 444 aa1.77□□□□□ -2.13
RNU6-539P-201ENST00000516665 FRMD5Q7Z6J6 570 aa1.77□□□□□ -2.13
RNU6-539P-201ENST00000516665 GPIHBP1Q8IV16 184 aa1.77□□□□□ -2.13
RNU6-539P-201ENST00000516665 SH3RF3Q8TEJ3 882 aaPredicted RBP1.77□□□□□ -2.13
RNU6-539P-201ENST00000516665 EFCC1Q9HA90 598 aa1.77□□□□□ -2.13
RNU6-539P-201ENST00000516665 CNOT11Q9UKZ1 510 aaKnown RBP1.77□□□□□ -2.13
RNU6-539P-201ENST00000516665 U3KQE9 123 aa1.77□□□□□ -2.13
RNU6-539P-201ENST00000516665 SLC22A31A6NKX4 558 aa1.76□□□□□ -2.13
RNU6-539P-201ENST00000516665 INHAP05111 366 aa1.76□□□□□ -2.13
RNU6-539P-201ENST00000516665 CDC25BP30305 580 aa1.76□□□□□ -2.13
RNU6-539P-201ENST00000516665 DLG4P78352 724 aa1.76□□□□□ -2.13
RNU6-539P-201ENST00000516665 SSPNQ14714 243 aa1.76□□□□□ -2.13
RNU6-539P-201ENST00000516665 VMACQ2NL98 169 aa1.76□□□□□ -2.13
RNU6-539P-201ENST00000516665 TMEM151BQ8IW70 566 aa1.76□□□□□ -2.13
RNU6-539P-201ENST00000516665 ZNF280CQ8ND82 737 aa1.76□□□□□ -2.13
RNU6-539P-201ENST00000516665 SMPD4Q9NXE4 827 aa1.76□□□□□ -2.13
RNU6-539P-201ENST00000516665 ZFATQ9P243 1243 aa1.76□□□□□ -2.13
RNU6-539P-201ENST00000516665 GDF10P55107 478 aa1.75□□□□□ -2.13
RNU6-539P-201ENST00000516665 CPZQ66K79 652 aa1.75□□□□□ -2.13
RNU6-539P-201ENST00000516665 CYFIP1Q7L576 1253 aa1.75□□□□□ -2.13
RNU6-539P-201ENST00000516665 SP8Q8IXZ3 490 aa1.75□□□□□ -2.13
RNU6-539P-201ENST00000516665 RHPN1Q8TCX5 695 aa1.75□□□□□ -2.13
RNU6-539P-201ENST00000516665 PANK1Q8TE04 598 aa1.75□□□□□ -2.13
RNU6-539P-201ENST00000516665 RUSC1Q9BVN2 902 aa1.75□□□□□ -2.13
RNU6-539P-201ENST00000516665 SERTAD1Q9UHV2 236 aa1.75□□□□□ -2.13
RNU6-539P-201ENST00000516665 J3QW42 95 aa1.74□□□□□ -2.13
RNU6-539P-201ENST00000516665 RFXAPO00287 272 aa1.74□□□□□ -2.13
RNU6-539P-201ENST00000516665 CDK2AP1O14519 115 aa1.74□□□□□ -2.13
RNU6-539P-201ENST00000516665 MAP3K6O95382 1288 aa1.74□□□□□ -2.13
RNU6-539P-201ENST00000516665 ZNF20P17024 532 aa1.74□□□□□ -2.13
RNU6-539P-201ENST00000516665 CCINQ13939 588 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms