RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 TMEM67Q5HYA8 995 aa1.25□□□□□ -2.21
RNU6-542P-201ENST00000516405 HFE2Q6ZVN8 426 aa1.25□□□□□ -2.21
RNU6-542P-201ENST00000516405 PLD6Q8N2A8 252 aaKnown RBP1.25□□□□□ -2.21
RNU6-542P-201ENST00000516405 VOPP1Q96AW1 172 aa1.25□□□□□ -2.21
RNU6-542P-201ENST00000516405 CEP63Q96MT8 703 aa1.25□□□□□ -2.21
RNU6-542P-201ENST00000516405 KRTAP3-1Q9BYR8 98 aa1.25□□□□□ -2.21
RNU6-542P-201ENST00000516405 GTF3C5Q9Y5Q8 519 aaPredicted RBP1.25□□□□□ -2.21
RNU6-542P-201ENST00000516405 SFI1A8K8P3 1242 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 CYSRT1A8MQ03 144 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 LINC01387J3KSC0 135 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 ERBB2P04626 1255 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 SRFP11831 508 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 NFKB1P19838 968 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 AFMP43652 599 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 SCNN1DP51172 638 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 SMTNP53814 917 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 TYRO3Q06418 890 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 ZNF827Q17R98 1081 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 TMEM259Q4ZIN3 620 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 RNF20Q5VTR2 975 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 DUSP27Q5VZP5 1158 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 CDPF1Q6NVV7 123 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 CRIP3Q6Q6R5 217 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 PAOXQ6QHF9 649 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 TRPM4Q8TD43 1214 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 KIRREL1Q96J84 757 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 BRIP1Q9BX63 1249 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 EPB41L4BQ9H329 900 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 EFCC1Q9HA90 598 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 LIMD1Q9UGP4 676 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 VAV3Q9UKW4 847 aa1.24□□□□□ -2.21
RNU6-542P-201ENST00000516405 K7ESM1 405 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 GAS2O43903 313 aaKnown RBP1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 NANOS3P60323 173 aaKnown RBP1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 PRKCQQ04759 706 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 PCSK7Q16549 785 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 TXNDC11Q6PKC3 985 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 ZNF280CQ8ND82 737 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 ZDHHC1Q8WTX9 485 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 FBLIM1Q8WUP2 373 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 HSH2DQ96JZ2 352 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 BEGAINQ9BUH8 593 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 CARD10Q9BWT7 1032 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 CABP1Q9NZU7 370 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 ZFATQ9P243 1243 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 PPME1Q9Y570 386 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 PCDHB9Q9Y5E1 797 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 U3KQE9 123 aa1.23□□□□□ -2.21
RNU6-542P-201ENST00000516405 ZC3H12DA2A288 527 aaKnown RBP1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 CDK2AP1O14519 115 aa1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 INHAP05111 366 aa1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 INHBEP58166 350 aa1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 LCE1AQ5T7P2 110 aa1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 DHX32Q7L7V1 743 aaKnown RBP1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 NETO1Q8TDF5 533 aa1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 CCDC102AQ96A19 550 aa1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 PLD4Q96BZ4 506 aa1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 SLC26A8Q96RN1 970 aa1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 KRTAP2-2Q9BYT5 123 aa1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 NEUROD4Q9HD90 331 aa1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 CNOT11Q9UKZ1 510 aaKnown RBP1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 KCTD3Q9Y597 815 aa1.22□□□□□ -2.21
RNU6-542P-201ENST00000516405 FZD7O75084 574 aa1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 DLG4P78352 724 aa1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 GPLD1P80108 840 aa1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 MTFR1Q15390 333 aa1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 AOC3Q16853 763 aa1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 FDX2Q6P4F2 183 aa1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 ADAMTSL4Q6UY14 1074 aa1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 FRMD5Q7Z6J6 570 aa1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 PANK1Q8TE04 598 aa1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 EZH1Q92800 747 aaPredicted RBP1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 PNMA5Q96PV4 448 aa1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 C19orf73Q9NVV2 129 aa1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 CNOT6Q9ULM6 557 aaKnown RBP1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 TRIM33Q9UPN9 1127 aa1.21□□□□□ -2.22
RNU6-542P-201ENST00000516405 MINK1Q8N4C8 1332 aaPredicted RBP1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 NOTCH2Q04721 2471 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 TESPA1A2RU30 521 aaPredicted RBP1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 KRTAP9-6A8MVA2 160 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 J3QW42 95 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 MAP3K6O95382 1288 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 MYCP01106 439 aaPredicted RBP1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 EIF2AK2P19525 551 aaKnown RBP1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 CYP27A1Q02318 531 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 CCINQ13939 588 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 SSPNQ14714 243 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 VMACQ2NL98 169 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 ZNF385BQ569K4 471 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 ANGEL2Q5VTE6 544 aaKnown RBP1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 CPZQ66K79 652 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 SPRED1Q7Z699 444 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 KRI1Q8N9T8 703 aaKnown RBP1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 FAM181AQ8N9Y4 354 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 L3MBTL2Q969R5 705 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 KLHDC7BQ96G42 594 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 CCDC85AQ96PX6 553 aaPredicted RBP1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 C1QTNF3Q9BXJ4 246 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 RNF208Q9H0X6 261 aa1.2□□□□□ -2.22
RNU6-542P-201ENST00000516405 GPC6Q9Y625 555 aaPredicted RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms