RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 TRIM27P14373 513 aa14.03□□□□□ -0.16
SCARNA16.1-201ENST00000516133 STRIP1Q5VSL9 837 aa14.03□□□□□ -0.16
SCARNA16.1-201ENST00000516133 ZKSCAN2Q63HK3 967 aa14.03□□□□□ -0.16
SCARNA16.1-201ENST00000516133 TXNRD3Q86VQ6 643 aa14.03□□□□□ -0.16
SCARNA16.1-201ENST00000516133 MROH5Q6ZUA9 1318 aa14.03□□□□□ -0.16
SCARNA16.1-201ENST00000516133 PASKQ96RG2 1323 aa14.03□□□□□ -0.16
SCARNA16.1-201ENST00000516133 USP17L8P0C7I0 530 aa14.02□□□□□ -0.17
SCARNA16.1-201ENST00000516133 MMP14P50281 582 aa14.02□□□□□ -0.17
SCARNA16.1-201ENST00000516133 HIRAP54198 1017 aaPredicted RBP14.02□□□□□ -0.17
SCARNA16.1-201ENST00000516133 UBE4AQ14139 1066 aa14.02□□□□□ -0.17
SCARNA16.1-201ENST00000516133 PUS3Q9BZE2 481 aaKnown RBP14.02□□□□□ -0.17
SCARNA16.1-201ENST00000516133 CREBZFQ9NS37 354 aa14.02□□□□□ -0.17
SCARNA16.1-201ENST00000516133 SNAP23O00161 211 aa14.01□□□□□ -0.17
SCARNA16.1-201ENST00000516133 KLRK1P26718 216 aa14.01□□□□□ -0.17
SCARNA16.1-201ENST00000516133 ZNF280AP59817 542 aaPredicted RBP14.01□□□□□ -0.17
SCARNA16.1-201ENST00000516133 HTRA3P83110 453 aa14.01□□□□□ -0.17
SCARNA16.1-201ENST00000516133 DACT2Q5SW24 774 aa14.01□□□□□ -0.17
SCARNA16.1-201ENST00000516133 TTLL5Q6EMB2 1281 aa14.01□□□□□ -0.17
SCARNA16.1-201ENST00000516133 SAMD7Q7Z3H4 446 aa14.01□□□□□ -0.17
SCARNA16.1-201ENST00000516133 ZNF804AQ7Z570 1209 aa14.01□□□□□ -0.17
SCARNA16.1-201ENST00000516133 OGFOD1Q8N543 542 aa14.01□□□□□ -0.17
SCARNA16.1-201ENST00000516133 GMLQ99445 158 aa14.01□□□□□ -0.17
SCARNA16.1-201ENST00000516133 CD209Q9NNX6 404 aa14.01□□□□□ -0.17
SCARNA16.1-201ENST00000516133 SPEF2Q9C093 1822 aa14.01□□□□□ -0.17
SCARNA16.1-201ENST00000516133 MYO3BQ8WXR4 1341 aa14□□□□□ -0.17
SCARNA16.1-201ENST00000516133 SHTN1A0MZ66 631 aa14□□□□□ -0.17
SCARNA16.1-201ENST00000516133 TMEM88BA6NKF7 163 aa14□□□□□ -0.17
SCARNA16.1-201ENST00000516133 TBC1D10BQ4KMP7 808 aaPredicted RBP14□□□□□ -0.17
SCARNA16.1-201ENST00000516133 METTL24Q5JXM2 366 aa14□□□□□ -0.17
SCARNA16.1-201ENST00000516133 TRPM4Q8TD43 1214 aa14□□□□□ -0.17
SCARNA16.1-201ENST00000516133 CLUAP1Q96AJ1 413 aa14□□□□□ -0.17
SCARNA16.1-201ENST00000516133 KLRG1Q96E93 195 aa14□□□□□ -0.17
SCARNA16.1-201ENST00000516133 MEIS3Q99687 375 aa14□□□□□ -0.17
SCARNA16.1-201ENST00000516133 FBXO3Q9UK99 471 aa14□□□□□ -0.17
SCARNA16.1-201ENST00000516133 LRRFIP2Q9Y608 721 aaKnown RBP14□□□□□ -0.17
SCARNA16.1-201ENST00000516133 ADAMTSL1Q8N6G6 1762 aa14□□□□□ -0.17
SCARNA16.1-201ENST00000516133 SCN9AQ15858 1988 aa14□□□□□ -0.17
SCARNA16.1-201ENST00000516133 ZNF609O15014 1411 aa13.99□□□□□ -0.17
SCARNA16.1-201ENST00000516133 IRS2Q9Y4H2 1338 aa13.99□□□□□ -0.17
SCARNA16.1-201ENST00000516133 EYA2O00167 538 aa13.99□□□□□ -0.17
SCARNA16.1-201ENST00000516133 PDE8BO95263 885 aa13.99□□□□□ -0.17
SCARNA16.1-201ENST00000516133 IL1R1P14778 569 aa13.99□□□□□ -0.17
SCARNA16.1-201ENST00000516133 RFX5P48382 616 aaPredicted RBP13.99□□□□□ -0.17
SCARNA16.1-201ENST00000516133 GTF2IP78347 998 aa13.99□□□□□ -0.17
SCARNA16.1-201ENST00000516133 LRRC24Q50LG9 513 aa13.99□□□□□ -0.17
SCARNA16.1-201ENST00000516133 RBM26Q5T8P6 1007 aaKnown RBP13.99□□□□□ -0.17
SCARNA16.1-201ENST00000516133 CDC37L1Q7L3B6 337 aa13.99□□□□□ -0.17
SCARNA16.1-201ENST00000516133 KLHDC4Q8TBB5 520 aa13.99□□□□□ -0.17
SCARNA16.1-201ENST00000516133 FBXW7Q969H0 707 aa13.99□□□□□ -0.17
SCARNA16.1-201ENST00000516133 SASH1O94885 1247 aa13.98□□□□□ -0.17
SCARNA16.1-201ENST00000516133 HIBADHP31937 336 aaKnown RBP13.98□□□□□ -0.17
SCARNA16.1-201ENST00000516133 PTPN12Q05209 780 aaKnown RBP13.98□□□□□ -0.17
SCARNA16.1-201ENST00000516133 KIF4BQ2VIQ3 1234 aa13.98□□□□□ -0.17
SCARNA16.1-201ENST00000516133 CIAO1O76071 339 aa13.97□□□□□ -0.17
SCARNA16.1-201ENST00000516133 GNAI2P04899 355 aa13.97□□□□□ -0.17
SCARNA16.1-201ENST00000516133 CAVIN4Q5BKX8 364 aa13.97□□□□□ -0.17
SCARNA16.1-201ENST00000516133 VPS37DQ86XT2 251 aa13.97□□□□□ -0.17
SCARNA16.1-201ENST00000516133 FTSJ3Q8IY81 847 aaKnown RBP13.97□□□□□ -0.17
SCARNA16.1-201ENST00000516133 DZIP1LQ8IYY4 767 aaKnown RBP13.97□□□□□ -0.17
SCARNA16.1-201ENST00000516133 DCPSQ96C86 337 aaKnown RBP13.97□□□□□ -0.17
SCARNA16.1-201ENST00000516133 FAM84BQ96KN1 310 aaPredicted RBP13.97□□□□□ -0.17
SCARNA16.1-201ENST00000516133 MYOZ2Q9NPC6 264 aa13.97□□□□□ -0.17
SCARNA16.1-201ENST00000516133 HDAC9Q9UKV0 1011 aa13.97□□□□□ -0.17
SCARNA16.1-201ENST00000516133 TRAF5O00463 557 aa13.96□□□□□ -0.17
SCARNA16.1-201ENST00000516133 EGFRP00533 1210 aa13.96□□□□□ -0.17
SCARNA16.1-201ENST00000516133 FKBP1AP62942 108 aaKnown RBP13.96□□□□□ -0.17
SCARNA16.1-201ENST00000516133 MTX1Q13505 466 aa13.96□□□□□ -0.17
SCARNA16.1-201ENST00000516133 PUM3Q15397 648 aaKnown RBP13.96□□□□□ -0.17
SCARNA16.1-201ENST00000516133 TMEM57Q8N5G2 664 aa13.96□□□□□ -0.17
SCARNA16.1-201ENST00000516133 VGLL2Q8N8G2 317 aa13.96□□□□□ -0.17
SCARNA16.1-201ENST00000516133 TDRD7Q8NHU6 1098 aaKnown RBP13.96□□□□□ -0.17
SCARNA16.1-201ENST00000516133 GLIS2Q9BZE0 524 aaPredicted RBP13.96□□□□□ -0.17
SCARNA16.1-201ENST00000516133 COPRSQ9NQ92 184 aa13.96□□□□□ -0.17
SCARNA16.1-201ENST00000516133 PCNTO95613 3336 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 SRGAP3O43295 1099 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 IFIT1P09914 478 aaKnown RBP13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 MS4A1P11836 297 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 IL15P40933 162 aaPredicted RBP13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 GYG1P46976 350 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 SCARF1Q14162 830 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 ATG9AQ7Z3C6 839 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 KRT26Q7Z3Y9 468 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 FBXO33Q7Z6M2 555 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 USP48Q86UV5 1035 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 SULF1Q8IWU6 871 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 JMYQ8N9B5 988 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 MXD3Q9BW11 206 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 CEP126Q9P2H0 1117 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 TNNQ9UQP3 1299 aa13.95□□□□□ -0.18
SCARNA16.1-201ENST00000516133 FAM205AQ6ZU69 1335 aa13.94□□□□□ -0.18
SCARNA16.1-201ENST00000516133 CST9Q5W186 159 aa13.94□□□□□ -0.18
SCARNA16.1-201ENST00000516133 KIAA0825Q8IV33 1275 aa13.94□□□□□ -0.18
SCARNA16.1-201ENST00000516133 LPIN2Q92539 896 aa13.94□□□□□ -0.18
SCARNA16.1-201ENST00000516133 SIL1Q9H173 461 aa13.94□□□□□ -0.18
SCARNA16.1-201ENST00000516133 ABT1Q9ULW3 272 aaKnown RBP13.94□□□□□ -0.18
SCARNA16.1-201ENST00000516133 PSME4Q14997 1843 aa13.94□□□□□ -0.18
SCARNA16.1-201ENST00000516133 FRAT2O75474 233 aaPredicted RBP13.93□□□□□ -0.18
SCARNA16.1-201ENST00000516133 CELF2O95319 508 aaKnown RBP13.93□□□□□ -0.18
SCARNA16.1-201ENST00000516133 SLC5A1P13866 664 aa13.93□□□□□ -0.18
SCARNA16.1-201ENST00000516133 FGFR2P21802 821 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms