RNA–Protein interactions for RNA: ENST00000515658.1

COL4A5-210, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-210ENST00000515658 MAP1SQ66K74 1059 aaPredicted RBP12.62□□□□□ -0.39
COL4A5-210ENST00000515658 DLK2Q6UY11 383 aa12.62□□□□□ -0.39
COL4A5-210ENST00000515658 TRMT2AQ8IZ69 625 aaKnown RBP12.62□□□□□ -0.39
COL4A5-210ENST00000515658 LINS1Q8NG48 757 aa12.62□□□□□ -0.39
COL4A5-210ENST00000515658 HACL1Q9UJ83 578 aa12.62□□□□□ -0.39
COL4A5-210ENST00000515658 ZNRF3Q9ULT6 936 aa12.62□□□□□ -0.39
COL4A5-210ENST00000515658 COLQQ9Y215 455 aaPredicted RBP12.62□□□□□ -0.39
COL4A5-210ENST00000515658 MYH3P11055 1940 aa12.62□□□□□ -0.39
COL4A5-210ENST00000515658 POTEFA5A3E0 1075 aa12.61□□□□□ -0.39
COL4A5-210ENST00000515658 C6orf229H3BNL8 230 aa12.61□□□□□ -0.39
COL4A5-210ENST00000515658 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
COL4A5-210ENST00000515658 EGFRP00533 1210 aa12.61□□□□□ -0.39
COL4A5-210ENST00000515658 EIF6P56537 245 aaKnown RBP12.61□□□□□ -0.39
COL4A5-210ENST00000515658 NEXNQ0ZGT2 675 aa12.61□□□□□ -0.39
COL4A5-210ENST00000515658 PDCD7Q8N8D1 485 aaKnown RBP12.61□□□□□ -0.39
COL4A5-210ENST00000515658 FBXO22Q8NEZ5 403 aa12.61□□□□□ -0.39
COL4A5-210ENST00000515658 KAZALD1Q96I82 304 aa12.61□□□□□ -0.39
COL4A5-210ENST00000515658 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
COL4A5-210ENST00000515658 UFL1O94874 794 aa12.6□□□□□ -0.39
COL4A5-210ENST00000515658 HIRAP54198 1017 aaPredicted RBP12.6□□□□□ -0.39
COL4A5-210ENST00000515658 WASHC4Q2M389 1173 aa12.6□□□□□ -0.39
COL4A5-210ENST00000515658 SLC4A10Q6U841 1118 aa12.6□□□□□ -0.39
COL4A5-210ENST00000515658 TXNRD3Q86VQ6 643 aa12.6□□□□□ -0.39
COL4A5-210ENST00000515658 TRPM4Q8TD43 1214 aa12.6□□□□□ -0.39
COL4A5-210ENST00000515658 PASKQ96RG2 1323 aa12.6□□□□□ -0.39
COL4A5-210ENST00000515658 IQCA1LA6NCM1 817 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 E9PSI1 815 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 TRAF5O00463 557 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 PSMD14O00487 310 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 ECE2O60344 883 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 CSF1RP07333 972 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 DIEXFQ68CQ4 756 aaKnown RBP12.59□□□□□ -0.39
COL4A5-210ENST00000515658 MAMSTRQ6ZN01 415 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 LDHDQ86WU2 507 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 ANKRD18AQ8IVF6 992 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 SUPT20HQ8NEM7 779 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 ZNF594Q96JF6 807 aaPredicted RBP12.59□□□□□ -0.39
COL4A5-210ENST00000515658 MXD3Q9BW11 206 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 PLA2G12BQ9BX93 195 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 GPRC5DQ9NZD1 345 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 MINPP1Q9UNW1 487 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 ZNF646O15015 1829 aaPredicted RBP12.59□□□□□ -0.39
COL4A5-210ENST00000515658 CACNA1FO60840 1977 aa12.59□□□□□ -0.39
COL4A5-210ENST00000515658 A0A1B0GUL6 1792 aa12.58□□□□□ -0.39
COL4A5-210ENST00000515658 NBPF7P0C2Y1 421 aaPredicted RBP12.58□□□□□ -0.4
COL4A5-210ENST00000515658 ITGA6P23229 1130 aa12.58□□□□□ -0.4
COL4A5-210ENST00000515658 CIAPIN1Q6FI81 312 aa12.58□□□□□ -0.4
COL4A5-210ENST00000515658 TMC4Q7Z404 712 aa12.58□□□□□ -0.4
COL4A5-210ENST00000515658 SUCLG2Q96I99 432 aa12.58□□□□□ -0.4
COL4A5-210ENST00000515658 TMX4Q9H1E5 349 aaPredicted RBP12.58□□□□□ -0.4
COL4A5-210ENST00000515658 PODXL2Q9NZ53 605 aa12.58□□□□□ -0.4
COL4A5-210ENST00000515658 ANKIB1Q9P2G1 1089 aa12.58□□□□□ -0.4
COL4A5-210ENST00000515658 TNNQ9UQP3 1299 aa12.58□□□□□ -0.4
COL4A5-210ENST00000515658 ASTN2O75129 1339 aaPredicted RBP12.58□□□□□ -0.4
COL4A5-210ENST00000515658 HELBQ8NG08 1087 aaPredicted RBP12.57□□□□□ -0.4
COL4A5-210ENST00000515658 CHMP4AQ9BY43 222 aa12.57□□□□□ -0.4
COL4A5-210ENST00000515658 GGA1Q9UJY5 639 aa12.57□□□□□ -0.4
COL4A5-210ENST00000515658 PCNTO95613 3336 aa12.57□□□□□ -0.4
COL4A5-210ENST00000515658 GRM8O00222 908 aa12.56□□□□□ -0.4
COL4A5-210ENST00000515658 LMBR1LQ6UX01 489 aa12.56□□□□□ -0.4
COL4A5-210ENST00000515658 SAMD7Q7Z3H4 446 aa12.56□□□□□ -0.4
COL4A5-210ENST00000515658 CNTROBQ8N137 903 aa12.56□□□□□ -0.4
COL4A5-210ENST00000515658 KLRG1Q96E93 195 aa12.56□□□□□ -0.4
COL4A5-210ENST00000515658 VPS33BQ9H267 617 aa12.56□□□□□ -0.4
COL4A5-210ENST00000515658 BSDC1Q9NW68 430 aaPredicted RBP12.56□□□□□ -0.4
COL4A5-210ENST00000515658 IRS2Q9Y4H2 1338 aa12.56□□□□□ -0.4
COL4A5-210ENST00000515658 TAF5LO75529 589 aa12.55□□□□□ -0.4
COL4A5-210ENST00000515658 MICALL2Q8IY33 904 aa12.55□□□□□ -0.4
COL4A5-210ENST00000515658 ANKRD44Q8N8A2 993 aa12.55□□□□□ -0.4
COL4A5-210ENST00000515658 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
COL4A5-210ENST00000515658 CDC5LQ99459 802 aaKnown RBP12.55□□□□□ -0.4
COL4A5-210ENST00000515658 PUS3Q9BZE2 481 aaKnown RBP12.55□□□□□ -0.4
COL4A5-210ENST00000515658 MKRN1Q9UHC7 482 aaKnown RBP12.55□□□□□ -0.4
COL4A5-210ENST00000515658 CHMP3Q9Y3E7 222 aa12.55□□□□□ -0.4
COL4A5-210ENST00000515658 XDHP47989 1333 aa12.55□□□□□ -0.4
COL4A5-210ENST00000515658 LMOD1P29536 600 aaPredicted RBP12.54□□□□□ -0.4
COL4A5-210ENST00000515658 CCT4P50991 539 aaKnown RBP12.54□□□□□ -0.4
COL4A5-210ENST00000515658 TBC1D10BQ4KMP7 808 aaPredicted RBP12.54□□□□□ -0.4
COL4A5-210ENST00000515658 GLIS2Q9BZE0 524 aaPredicted RBP12.54□□□□□ -0.4
COL4A5-210ENST00000515658 SRCIN1Q9C0H9 1055 aa12.54□□□□□ -0.4
COL4A5-210ENST00000515658 CNOT7Q9UIV1 285 aaKnown RBP12.54□□□□□ -0.4
COL4A5-210ENST00000515658 SCAF8Q9UPN6 1271 aaKnown RBP12.54□□□□□ -0.4
COL4A5-210ENST00000515658 GTPBP6O43824 516 aaPredicted RBP12.53□□□□□ -0.4
COL4A5-210ENST00000515658 ALDH1L1O75891 902 aa12.53□□□□□ -0.4
COL4A5-210ENST00000515658 CHRNDQ07001 517 aa12.53□□□□□ -0.4
COL4A5-210ENST00000515658 RBM26Q5T8P6 1007 aaKnown RBP12.53□□□□□ -0.4
COL4A5-210ENST00000515658 CST9Q5W186 159 aa12.53□□□□□ -0.4
COL4A5-210ENST00000515658 KLHDC4Q8TBB5 520 aa12.53□□□□□ -0.4
COL4A5-210ENST00000515658 ZC3H12CQ9C0D7 883 aaKnown RBP12.53□□□□□ -0.4
COL4A5-210ENST00000515658 BICC1Q9H694 974 aaKnown RBP12.53□□□□□ -0.4
COL4A5-210ENST00000515658 ADARB2Q9NS39 739 aaKnown RBP12.53□□□□□ -0.4
COL4A5-210ENST00000515658 SMC4Q9NTJ3 1288 aa12.53□□□□□ -0.4
COL4A5-210ENST00000515658 NOB1Q9ULX3 412 aaKnown RBP12.53□□□□□ -0.4
COL4A5-210ENST00000515658 VIL1P09327 827 aaKnown RBP12.52□□□□□ -0.41
COL4A5-210ENST00000515658 HSP90B1P14625 803 aaKnown RBP12.52□□□□□ -0.41
COL4A5-210ENST00000515658 ATP2B4P23634 1241 aa12.52□□□□□ -0.41
COL4A5-210ENST00000515658 IGHMBP2P38935 993 aaKnown RBP12.52□□□□□ -0.41
COL4A5-210ENST00000515658 TNIP1Q15025 636 aa12.52□□□□□ -0.41
COL4A5-210ENST00000515658 PNMA8AQ86V59 439 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms