RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ZNF280AP59817 542 aaPredicted RBP17.27■□□□□ 0.36
TCOF1-215ENST00000515516 SLFN5Q08AF3 891 aa17.27■□□□□ 0.36
TCOF1-215ENST00000515516 CYP4F22Q6NT55 531 aa17.27■□□□□ 0.36
TCOF1-215ENST00000515516 SAPCD2Q86UD0 394 aa17.27■□□□□ 0.36
TCOF1-215ENST00000515516 SULF1Q8IWU6 871 aa17.27■□□□□ 0.36
TCOF1-215ENST00000515516 TNS4Q8IZW8 715 aa17.27■□□□□ 0.36
TCOF1-215ENST00000515516 OGFOD1Q8N543 542 aa17.27■□□□□ 0.36
TCOF1-215ENST00000515516 MRPL50Q8N5N7 158 aaKnown RBP17.27■□□□□ 0.36
TCOF1-215ENST00000515516 BEGAINQ9BUH8 593 aa17.27■□□□□ 0.36
TCOF1-215ENST00000515516 PTPRCP08575 1304 aa17.26■□□□□ 0.35
TCOF1-215ENST00000515516 STRIP1Q5VSL9 837 aa17.26■□□□□ 0.35
TCOF1-215ENST00000515516 MYOZ2Q9NPC6 264 aa17.26■□□□□ 0.35
TCOF1-215ENST00000515516 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
TCOF1-215ENST00000515516 WBP1LQ9NX94 342 aa17.26■□□□□ 0.35
TCOF1-215ENST00000515516 MYO3BQ8WXR4 1341 aa17.25■□□□□ 0.35
TCOF1-215ENST00000515516 FOXN1O15353 648 aa17.25■□□□□ 0.35
TCOF1-215ENST00000515516 SCARF1Q14162 830 aa17.25■□□□□ 0.35
TCOF1-215ENST00000515516 LDHAL6AQ6ZMR3 332 aa17.25■□□□□ 0.35
TCOF1-215ENST00000515516 C2orf69Q8N8R5 385 aa17.25■□□□□ 0.35
TCOF1-215ENST00000515516 HHIPL1Q96JK4 782 aa17.25■□□□□ 0.35
TCOF1-215ENST00000515516 GGA3Q9NZ52 723 aa17.25■□□□□ 0.35
TCOF1-215ENST00000515516 ADM5C9JUS6 153 aa17.24■□□□□ 0.35
TCOF1-215ENST00000515516 EPHA10Q5JZY3 1008 aa17.24■□□□□ 0.35
TCOF1-215ENST00000515516 TTLL5Q6EMB2 1281 aa17.24■□□□□ 0.35
TCOF1-215ENST00000515516 HELBQ8NG08 1087 aaPredicted RBP17.24■□□□□ 0.35
TCOF1-215ENST00000515516 GMLQ99445 158 aa17.24■□□□□ 0.35
TCOF1-215ENST00000515516 ZNF609O15014 1411 aa17.23■□□□□ 0.35
TCOF1-215ENST00000515516 PLIN1O60240 522 aa17.23■□□□□ 0.35
TCOF1-215ENST00000515516 TAF5LO75529 589 aa17.23■□□□□ 0.35
TCOF1-215ENST00000515516 MAP2K2P36507 400 aa17.23■□□□□ 0.35
TCOF1-215ENST00000515516 MMP14P50281 582 aa17.23■□□□□ 0.35
TCOF1-215ENST00000515516 HUNKP57058 714 aa17.23■□□□□ 0.35
TCOF1-215ENST00000515516 DACT2Q5SW24 774 aa17.23■□□□□ 0.35
TCOF1-215ENST00000515516 ANGEL2Q5VTE6 544 aaKnown RBP17.23■□□□□ 0.35
TCOF1-215ENST00000515516 TXNRD3Q86VQ6 643 aa17.23■□□□□ 0.35
TCOF1-215ENST00000515516 SSH1Q8WYL5 1049 aa17.23■□□□□ 0.35
TCOF1-215ENST00000515516 HDAC9Q9UKV0 1011 aa17.23■□□□□ 0.35
TCOF1-215ENST00000515516 KLRK1P26718 216 aa17.22■□□□□ 0.35
TCOF1-215ENST00000515516 GTF2IP78347 998 aa17.22■□□□□ 0.35
TCOF1-215ENST00000515516 ALDH1L2Q3SY69 923 aa17.22■□□□□ 0.35
TCOF1-215ENST00000515516 ZNF804AQ7Z570 1209 aa17.22■□□□□ 0.35
TCOF1-215ENST00000515516 CDCA7LQ96GN5 454 aa17.22■□□□□ 0.35
TCOF1-215ENST00000515516 ZNF594Q96JF6 807 aaPredicted RBP17.22■□□□□ 0.35
TCOF1-215ENST00000515516 MXD3Q9BW11 206 aa17.22■□□□□ 0.35
TCOF1-215ENST00000515516 GBA2Q9HCG7 927 aaPredicted RBP17.22■□□□□ 0.35
TCOF1-215ENST00000515516 PRDM10Q9NQV6 1147 aa17.22■□□□□ 0.35
TCOF1-215ENST00000515516 NBPF7P0C2Y1 421 aaPredicted RBP17.21■□□□□ 0.35
TCOF1-215ENST00000515516 DLK2Q6UY11 383 aa17.21■□□□□ 0.35
TCOF1-215ENST00000515516 SUCLG2Q96I99 432 aa17.21■□□□□ 0.35
TCOF1-215ENST00000515516 CD209Q9NNX6 404 aa17.21■□□□□ 0.35
TCOF1-215ENST00000515516 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
TCOF1-215ENST00000515516 CACNA1FO60840 1977 aa17.2■□□□□ 0.34
TCOF1-215ENST00000515516 AOC2O75106 756 aa17.2■□□□□ 0.34
TCOF1-215ENST00000515516 CT47B1P0C2W7 299 aaPredicted RBP17.2■□□□□ 0.34
TCOF1-215ENST00000515516 C15orf52Q6ZUT6 534 aaKnown RBP17.2■□□□□ 0.34
TCOF1-215ENST00000515516 UTYO14607 1347 aa17.2■□□□□ 0.34
TCOF1-215ENST00000515516 ASTN2O75129 1339 aaPredicted RBP17.2■□□□□ 0.34
TCOF1-215ENST00000515516 PITPNM2Q9BZ72 1349 aa17.2■□□□□ 0.34
TCOF1-215ENST00000515516 SNAP23O00161 211 aa17.19■□□□□ 0.34
TCOF1-215ENST00000515516 LBX1P52954 281 aa17.19■□□□□ 0.34
TCOF1-215ENST00000515516 CDCA5Q96FF9 252 aa17.19■□□□□ 0.34
TCOF1-215ENST00000515516 MYH3P11055 1940 aa17.18■□□□□ 0.34
TCOF1-215ENST00000515516 NOGQ13253 232 aa17.18■□□□□ 0.34
TCOF1-215ENST00000515516 RGMBQ6NW40 437 aa17.18■□□□□ 0.34
TCOF1-215ENST00000515516 KIAA0825Q8IV33 1275 aa17.18■□□□□ 0.34
TCOF1-215ENST00000515516 CCDC102AQ96A19 550 aa17.18■□□□□ 0.34
TCOF1-215ENST00000515516 BICC1Q9H694 974 aaKnown RBP17.18■□□□□ 0.34
TCOF1-215ENST00000515516 ZNF157P51786 506 aaPredicted RBP17.17■□□□□ 0.34
TCOF1-215ENST00000515516 NBPF9Q3BBW0 867 aa17.17■□□□□ 0.34
TCOF1-215ENST00000515516 TRMT2AQ8IZ69 625 aaKnown RBP17.17■□□□□ 0.34
TCOF1-215ENST00000515516 KAZALD1Q96I82 304 aa17.17■□□□□ 0.34
TCOF1-215ENST00000515516 MROH5Q6ZUA9 1318 aa17.17■□□□□ 0.34
TCOF1-215ENST00000515516 WNT10BO00744 389 aa17.16■□□□□ 0.34
TCOF1-215ENST00000515516 CA12O43570 354 aa17.16■□□□□ 0.34
TCOF1-215ENST00000515516 CAPN15O75808 1086 aa17.16■□□□□ 0.34
TCOF1-215ENST00000515516 HSPA8P11142 646 aaKnown RBP17.16■□□□□ 0.34
TCOF1-215ENST00000515516 IL1R1P14778 569 aa17.16■□□□□ 0.34
TCOF1-215ENST00000515516 BRPF1P55201 1214 aaPredicted RBP17.16■□□□□ 0.34
TCOF1-215ENST00000515516 UBE4AQ14139 1066 aa17.16■□□□□ 0.34
TCOF1-215ENST00000515516 SCN9AQ15858 1988 aa17.15■□□□□ 0.34
TCOF1-215ENST00000515516 NF2P35240 595 aa17.15■□□□□ 0.34
TCOF1-215ENST00000515516 FKBP1BP68106 108 aa17.15■□□□□ 0.34
TCOF1-215ENST00000515516 DLGAP5Q15398 846 aa17.15■□□□□ 0.34
TCOF1-215ENST00000515516 RABL6Q3YEC7 729 aaPredicted RBP17.15■□□□□ 0.34
TCOF1-215ENST00000515516 METTL24Q5JXM2 366 aa17.15■□□□□ 0.34
TCOF1-215ENST00000515516 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
TCOF1-215ENST00000515516 IRS2Q9Y4H2 1338 aa17.15■□□□□ 0.34
TCOF1-215ENST00000515516 PCNTO95613 3336 aa17.14■□□□□ 0.34
TCOF1-215ENST00000515516 TRPM7Q96QT4 1865 aa17.14■□□□□ 0.33
TCOF1-215ENST00000515516 SASH1O94885 1247 aa17.14■□□□□ 0.33
TCOF1-215ENST00000515516 HIBADHP31937 336 aaKnown RBP17.14■□□□□ 0.33
TCOF1-215ENST00000515516 FKBP1AP62942 108 aaKnown RBP17.14■□□□□ 0.33
TCOF1-215ENST00000515516 VPS37DQ86XT2 251 aa17.14■□□□□ 0.33
TCOF1-215ENST00000515516 APOBEC3FQ8IUX4 373 aaKnown RBP17.14■□□□□ 0.33
TCOF1-215ENST00000515516 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.33
TCOF1-215ENST00000515516 USP44Q9H0E7 712 aa17.14■□□□□ 0.33
TCOF1-215ENST00000515516 NOB1Q9ULX3 412 aaKnown RBP17.14■□□□□ 0.33
TCOF1-215ENST00000515516 HDAC5Q9UQL6 1122 aa17.14■□□□□ 0.33
TCOF1-215ENST00000515516 RIPOR2Q9Y4F9 1068 aa17.14■□□□□ 0.33
TCOF1-215ENST00000515516 SPEF2Q9C093 1822 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms