RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 WTIPA6NIX2 430 aaPredicted RBP23.61■■□□□ 1.37
SPOP-220ENST00000515508 KIF23Q02241 960 aaPredicted RBP23.61■■□□□ 1.37
SPOP-220ENST00000515508 TWISTNBQ3B726 338 aaPredicted RBP23.61■■□□□ 1.37
SPOP-220ENST00000515508 CCDC184Q52MB2 194 aa23.61■■□□□ 1.37
SPOP-220ENST00000515508 H7C1W4 665 aa23.6■■□□□ 1.37
SPOP-220ENST00000515508 CCT4P50991 539 aaKnown RBP23.6■■□□□ 1.37
SPOP-220ENST00000515508 FKBP1BP68106 108 aa23.6■■□□□ 1.37
SPOP-220ENST00000515508 IL16Q14005 1332 aa23.59■■□□□ 1.37
SPOP-220ENST00000515508 DGKZQ13574 1117 aa23.59■■□□□ 1.37
SPOP-220ENST00000515508 G2E3Q7L622 706 aa23.59■■□□□ 1.37
SPOP-220ENST00000515508 UBE3BQ7Z3V4 1068 aa23.59■■□□□ 1.37
SPOP-220ENST00000515508 PLA2G12BQ9BX93 195 aa23.59■■□□□ 1.37
SPOP-220ENST00000515508 NCBP3Q53F19 620 aaKnown RBP23.58■■□□□ 1.37
SPOP-220ENST00000515508 DACT2Q5SW24 774 aa23.58■■□□□ 1.37
SPOP-220ENST00000515508 MYO3BQ8WXR4 1341 aa23.58■■□□□ 1.36
SPOP-220ENST00000515508 SLC4A2P04920 1241 aa23.57■■□□□ 1.36
SPOP-220ENST00000515508 RASAL3Q86YV0 1011 aa23.57■■□□□ 1.36
SPOP-220ENST00000515508 RNF186Q9NXI6 227 aa23.57■■□□□ 1.36
SPOP-220ENST00000515508 A0A1B0GUL6 1792 aa23.57■■□□□ 1.36
SPOP-220ENST00000515508 MLLT1Q03111 559 aaPredicted RBP23.56■■□□□ 1.36
SPOP-220ENST00000515508 FLIIQ13045 1269 aa23.56■■□□□ 1.36
SPOP-220ENST00000515508 GCKRQ14397 625 aa23.56■■□□□ 1.36
SPOP-220ENST00000515508 STRIP1Q5VSL9 837 aa23.56■■□□□ 1.36
SPOP-220ENST00000515508 COA1Q9GZY4 146 aa23.56■■□□□ 1.36
SPOP-220ENST00000515508 LEMD3Q9Y2U8 911 aa23.56■■□□□ 1.36
SPOP-220ENST00000515508 IGHMBP2P38935 993 aaKnown RBP23.55■■□□□ 1.36
SPOP-220ENST00000515508 CASP7P55210 303 aa23.55■■□□□ 1.36
SPOP-220ENST00000515508 REM2Q8IYK8 340 aaPredicted RBP23.55■■□□□ 1.36
SPOP-220ENST00000515508 CSRNP1Q96S65 589 aa23.55■■□□□ 1.36
SPOP-220ENST00000515508 TRPA1O75762 1119 aa23.54■■□□□ 1.36
SPOP-220ENST00000515508 ITGA6P23229 1130 aa23.54■■□□□ 1.36
SPOP-220ENST00000515508 NBPF9Q3BBW0 867 aa23.54■■□□□ 1.36
SPOP-220ENST00000515508 TXNRD3Q86VQ6 643 aa23.54■■□□□ 1.36
SPOP-220ENST00000515508 MXD3Q9BW11 206 aa23.54■■□□□ 1.36
SPOP-220ENST00000515508 MMP14P50281 582 aa23.53■■□□□ 1.36
SPOP-220ENST00000515508 OGFOD1Q8N543 542 aa23.53■■□□□ 1.36
SPOP-220ENST00000515508 MYH16Q9H6N6 1097 aa23.53■■□□□ 1.36
SPOP-220ENST00000515508 ZNF804BA4D1E1 1349 aa23.53■■□□□ 1.36
SPOP-220ENST00000515508 FANCIQ9NVI1 1328 aa23.53■■□□□ 1.36
SPOP-220ENST00000515508 WNT10BO00744 389 aa23.52■■□□□ 1.36
SPOP-220ENST00000515508 CSF1RP07333 972 aa23.52■■□□□ 1.36
SPOP-220ENST00000515508 LINS1Q8NG48 757 aa23.52■■□□□ 1.36
SPOP-220ENST00000515508 DNAAF4Q8WXU2 420 aa23.52■■□□□ 1.36
SPOP-220ENST00000515508 ANKRD2Q9GZV1 360 aa23.52■■□□□ 1.36
SPOP-220ENST00000515508 TNRC18O15417 2968 aaPredicted RBP23.52■■□□□ 1.36
SPOP-220ENST00000515508 KLRK1P26718 216 aa23.51■■□□□ 1.35
SPOP-220ENST00000515508 FKBP5Q13451 457 aaPredicted RBP23.51■■□□□ 1.35
SPOP-220ENST00000515508 SCAF8Q9UPN6 1271 aaKnown RBP23.51■■□□□ 1.35
SPOP-220ENST00000515508 MPHOSPH8Q99549 860 aa23.5■■□□□ 1.35
SPOP-220ENST00000515508 MOB2Q70IA6 237 aa23.49■■□□□ 1.35
SPOP-220ENST00000515508 FBXW7Q969H0 707 aa23.49■■□□□ 1.35
SPOP-220ENST00000515508 ECM29Q5VYK3 1845 aa23.49■■□□□ 1.35
SPOP-220ENST00000515508 CHRNDQ07001 517 aa23.48■■□□□ 1.35
SPOP-220ENST00000515508 PRAMEF18Q5VWM3 479 aa23.48■■□□□ 1.35
SPOP-220ENST00000515508 TTLL5Q6EMB2 1281 aa23.48■■□□□ 1.35
SPOP-220ENST00000515508 IRS2Q9Y4H2 1338 aa23.48■■□□□ 1.35
SPOP-220ENST00000515508 VAMP4O75379 141 aa23.47■■□□□ 1.35
SPOP-220ENST00000515508 SASH1O94885 1247 aa23.47■■□□□ 1.35
SPOP-220ENST00000515508 ZBED3Q96IU2 234 aaPredicted RBP23.47■■□□□ 1.35
SPOP-220ENST00000515508 UBE2Q2LH0YL09 131 aa23.46■■□□□ 1.35
SPOP-220ENST00000515508 COL1A1P02452 1464 aaPredicted RBP23.46■■□□□ 1.35
SPOP-220ENST00000515508 WDR63Q8IWG1 891 aa23.46■■□□□ 1.35
SPOP-220ENST00000515508 ANKRD18BA2A2Z9 1011 aa23.45■■□□□ 1.34
SPOP-220ENST00000515508 NF2P35240 595 aa23.45■■□□□ 1.34
SPOP-220ENST00000515508 C15orf52Q6ZUT6 534 aaKnown RBP23.45■■□□□ 1.34
SPOP-220ENST00000515508 APOBEC3FQ8IUX4 373 aaKnown RBP23.45■■□□□ 1.34
SPOP-220ENST00000515508 KIAA0825Q8IV33 1275 aa23.45■■□□□ 1.34
SPOP-220ENST00000515508 HDAC9Q9UKV0 1011 aa23.45■■□□□ 1.34
SPOP-220ENST00000515508 KCNJ4P48050 445 aa23.44■■□□□ 1.34
SPOP-220ENST00000515508 GTF2IP78347 998 aa23.44■■□□□ 1.34
SPOP-220ENST00000515508 CTU1Q7Z7A3 348 aaKnown RBP23.44■■□□□ 1.34
SPOP-220ENST00000515508 MRS2Q9HD23 443 aa23.44■■□□□ 1.34
SPOP-220ENST00000515508 CD209Q9NNX6 404 aa23.44■■□□□ 1.34
SPOP-220ENST00000515508 LAMB1P07942 1786 aa23.44■■□□□ 1.34
SPOP-220ENST00000515508 FOXO4P98177 505 aa23.43■■□□□ 1.34
SPOP-220ENST00000515508 EXOSC9Q06265 439 aaKnown RBP23.43■■□□□ 1.34
SPOP-220ENST00000515508 TTLL12Q14166 644 aaPredicted RBP23.43■■□□□ 1.34
SPOP-220ENST00000515508 BEND3Q5T5X7 828 aa23.42■■□□□ 1.34
SPOP-220ENST00000515508 TM4SF4P48230 202 aa23.41■■□□□ 1.34
SPOP-220ENST00000515508 IFIT5Q13325 482 aaKnown RBP23.41■■□□□ 1.34
SPOP-220ENST00000515508 F6X3S4 739 aa23.4■■□□□ 1.34
SPOP-220ENST00000515508 SNAP23O00161 211 aa23.4■■□□□ 1.34
SPOP-220ENST00000515508 TAF5LO75529 589 aa23.4■■□□□ 1.34
SPOP-220ENST00000515508 NOM1Q5C9Z4 860 aaKnown RBP23.4■■□□□ 1.34
SPOP-220ENST00000515508 CERS5Q8N5B7 392 aa23.4■■□□□ 1.34
SPOP-220ENST00000515508 MTMR14Q8NCE2 650 aa23.4■■□□□ 1.34
SPOP-220ENST00000515508 SLC34A2O95436 690 aa23.39■■□□□ 1.33
SPOP-220ENST00000515508 IL1R1P14778 569 aa23.39■■□□□ 1.33
SPOP-220ENST00000515508 PTPN12Q05209 780 aaKnown RBP23.39■■□□□ 1.33
SPOP-220ENST00000515508 LDLRAD1Q5T700 205 aa23.39■■□□□ 1.33
SPOP-220ENST00000515508 ARMC9Q7Z3E5 817 aa23.39■■□□□ 1.33
SPOP-220ENST00000515508 SSC5DA1L4H1 1573 aa23.39■■□□□ 1.33
SPOP-220ENST00000515508 PDE4DIPQ5VU43 2346 aa23.38■■□□□ 1.33
SPOP-220ENST00000515508 ZNF804AQ7Z570 1209 aa23.38■■□□□ 1.33
SPOP-220ENST00000515508 HELBQ8NG08 1087 aaPredicted RBP23.38■■□□□ 1.33
SPOP-220ENST00000515508 ZNF296Q8WUU4 475 aaPredicted RBP23.38■■□□□ 1.33
SPOP-220ENST00000515508 CFHR5Q9BXR6 569 aa23.38■■□□□ 1.33
SPOP-220ENST00000515508 ARAP2Q8WZ64 1704 aa23.38■■□□□ 1.33
SPOP-220ENST00000515508 TBC1D8O95759 1140 aa23.37■■□□□ 1.33
SPOP-220ENST00000515508 FKBP1AP62942 108 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms