RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 USP17L3A6NCW0 530 aa14.46□□□□□ -0.09
VCAN-212ENST00000515397 USP17L4A6NCW7 530 aa14.46□□□□□ -0.09
VCAN-212ENST00000515397 LRRC24Q50LG9 513 aa14.46□□□□□ -0.09
VCAN-212ENST00000515397 RSBN1LQ6PCB5 846 aaPredicted RBP14.46□□□□□ -0.09
VCAN-212ENST00000515397 USP17L1Q7RTZ2 530 aa14.46□□□□□ -0.09
VCAN-212ENST00000515397 DPF2Q92785 391 aa14.46□□□□□ -0.09
VCAN-212ENST00000515397 CLUAP1Q96AJ1 413 aa14.46□□□□□ -0.09
VCAN-212ENST00000515397 API5Q9BZZ5 524 aaKnown RBP14.46□□□□□ -0.09
VCAN-212ENST00000515397 JAG2Q9Y219 1238 aa14.46□□□□□ -0.09
VCAN-212ENST00000515397 SCN9AQ15858 1988 aa14.45□□□□□ -0.1
VCAN-212ENST00000515397 PODNQ7Z5L7 613 aa14.45□□□□□ -0.1
VCAN-212ENST00000515397 USP48Q86UV5 1035 aa14.45□□□□□ -0.1
VCAN-212ENST00000515397 COA1Q9GZY4 146 aa14.45□□□□□ -0.1
VCAN-212ENST00000515397 SCAF8Q9UPN6 1271 aaKnown RBP14.45□□□□□ -0.1
VCAN-212ENST00000515397 MED23Q9ULK4 1368 aa14.45□□□□□ -0.1
VCAN-212ENST00000515397 TMEM88BA6NKF7 163 aa14.44□□□□□ -0.1
VCAN-212ENST00000515397 BRPF1P55201 1214 aaPredicted RBP14.44□□□□□ -0.1
VCAN-212ENST00000515397 GTF2IP78347 998 aa14.44□□□□□ -0.1
VCAN-212ENST00000515397 RABL6Q3YEC7 729 aaPredicted RBP14.44□□□□□ -0.1
VCAN-212ENST00000515397 MEIS3Q99687 375 aa14.44□□□□□ -0.1
VCAN-212ENST00000515397 CREBZFQ9NS37 354 aa14.44□□□□□ -0.1
VCAN-212ENST00000515397 RIPOR2Q9Y4F9 1068 aa14.44□□□□□ -0.1
VCAN-212ENST00000515397 UBTFL1P0CB47 393 aaPredicted RBP14.43□□□□□ -0.1
VCAN-212ENST00000515397 RPS12P25398 132 aaKnown RBP14.43□□□□□ -0.1
VCAN-212ENST00000515397 DACT2Q5SW24 774 aa14.43□□□□□ -0.1
VCAN-212ENST00000515397 CST9Q5W186 159 aa14.43□□□□□ -0.1
VCAN-212ENST00000515397 TTLL5Q6EMB2 1281 aa14.43□□□□□ -0.1
VCAN-212ENST00000515397 GMLQ99445 158 aa14.43□□□□□ -0.1
VCAN-212ENST00000515397 ZNF408Q9H9D4 720 aa14.43□□□□□ -0.1
VCAN-212ENST00000515397 CD209Q9NNX6 404 aa14.43□□□□□ -0.1
VCAN-212ENST00000515397 LRRFIP2Q9Y608 721 aaKnown RBP14.43□□□□□ -0.1
VCAN-212ENST00000515397 IRS2Q9Y4H2 1338 aa14.42□□□□□ -0.1
VCAN-212ENST00000515397 TRIM27P14373 513 aa14.42□□□□□ -0.1
VCAN-212ENST00000515397 GYG1P46976 350 aa14.42□□□□□ -0.1
VCAN-212ENST00000515397 KIF4BQ2VIQ3 1234 aa14.42□□□□□ -0.1
VCAN-212ENST00000515397 PGAP2Q9UHJ9 254 aa14.42□□□□□ -0.1
VCAN-212ENST00000515397 ABT1Q9ULW3 272 aaKnown RBP14.42□□□□□ -0.1
VCAN-212ENST00000515397 ADAMTSL1Q8N6G6 1762 aa14.42□□□□□ -0.1
VCAN-212ENST00000515397 USP17L8P0C7I0 530 aa14.41□□□□□ -0.1
VCAN-212ENST00000515397 RFX5P48382 616 aaPredicted RBP14.41□□□□□ -0.1
VCAN-212ENST00000515397 SCARF1Q14162 830 aa14.41□□□□□ -0.1
VCAN-212ENST00000515397 METTL24Q5JXM2 366 aa14.41□□□□□ -0.1
VCAN-212ENST00000515397 AGBL3Q8NEM8 1001 aa14.41□□□□□ -0.1
VCAN-212ENST00000515397 SIL1Q9H173 461 aa14.41□□□□□ -0.1
VCAN-212ENST00000515397 ZBED9Q6R2W3 1325 aa14.41□□□□□ -0.1
VCAN-212ENST00000515397 KIF16BQ96L93 1317 aa14.41□□□□□ -0.1
VCAN-212ENST00000515397 ADM5C9JUS6 153 aa14.4□□□□□ -0.1
VCAN-212ENST00000515397 F8W031 263 aaPredicted RBP14.4□□□□□ -0.1
VCAN-212ENST00000515397 IPO8O15397 1037 aaKnown RBP14.4□□□□□ -0.1
VCAN-212ENST00000515397 CELF2O95319 508 aaKnown RBP14.4□□□□□ -0.1
VCAN-212ENST00000515397 ZNF280AP59817 542 aaPredicted RBP14.4□□□□□ -0.1
VCAN-212ENST00000515397 GRM1Q13255 1194 aa14.4□□□□□ -0.1
VCAN-212ENST00000515397 STRIP1Q5VSL9 837 aa14.4□□□□□ -0.1
VCAN-212ENST00000515397 INTS3Q68E01 1043 aaKnown RBP14.4□□□□□ -0.1
VCAN-212ENST00000515397 ATF7IPQ6VMQ6 1270 aa14.4□□□□□ -0.1
VCAN-212ENST00000515397 KRT26Q7Z3Y9 468 aa14.4□□□□□ -0.1
VCAN-212ENST00000515397 KIAA0825Q8IV33 1275 aa14.4□□□□□ -0.1
VCAN-212ENST00000515397 ARHGAP45Q92619 1136 aa14.4□□□□□ -0.1
VCAN-212ENST00000515397 IQSEC3Q9UPP2 1182 aaPredicted RBP14.4□□□□□ -0.1
VCAN-212ENST00000515397 PA2G4Q9UQ80 394 aaKnown RBP14.4□□□□□ -0.1
VCAN-212ENST00000515397 PCNTO95613 3336 aa14.4□□□□□ -0.11
VCAN-212ENST00000515397 VEGFBP49765 207 aa14.39□□□□□ -0.11
VCAN-212ENST00000515397 PTPN12Q05209 780 aaKnown RBP14.39□□□□□ -0.11
VCAN-212ENST00000515397 NBPF9Q3BBW0 867 aa14.39□□□□□ -0.11
VCAN-212ENST00000515397 CDC37L1Q7L3B6 337 aa14.39□□□□□ -0.11
VCAN-212ENST00000515397 CERS5Q8N5B7 392 aa14.39□□□□□ -0.11
VCAN-212ENST00000515397 TMEM57Q8N5G2 664 aa14.39□□□□□ -0.11
VCAN-212ENST00000515397 ZC3H15Q8WU90 426 aaKnown RBP14.39□□□□□ -0.11
VCAN-212ENST00000515397 FAM84BQ96KN1 310 aaPredicted RBP14.39□□□□□ -0.11
VCAN-212ENST00000515397 MYOZ2Q9NPC6 264 aa14.39□□□□□ -0.11
VCAN-212ENST00000515397 GGA3Q9NZ52 723 aa14.39□□□□□ -0.11
VCAN-212ENST00000515397 UBE4AQ14139 1066 aa14.38□□□□□ -0.11
VCAN-212ENST00000515397 DEFB115Q30KQ5 88 aa14.38□□□□□ -0.11
VCAN-212ENST00000515397 ANGEL2Q5VTE6 544 aaKnown RBP14.38□□□□□ -0.11
VCAN-212ENST00000515397 PRAMEF18Q5VWM3 479 aa14.38□□□□□ -0.11
VCAN-212ENST00000515397 C15orf52Q6ZUT6 534 aaKnown RBP14.38□□□□□ -0.11
VCAN-212ENST00000515397 PAXIP1Q6ZW49 1069 aaPredicted RBP14.38□□□□□ -0.11
VCAN-212ENST00000515397 ZNF804AQ7Z570 1209 aa14.38□□□□□ -0.11
VCAN-212ENST00000515397 JMYQ8N9B5 988 aa14.38□□□□□ -0.11
VCAN-212ENST00000515397 DCPSQ96C86 337 aaKnown RBP14.38□□□□□ -0.11
VCAN-212ENST00000515397 PCDHAC2Q9Y5I4 1007 aa14.38□□□□□ -0.11
VCAN-212ENST00000515397 MROH5Q6ZUA9 1318 aa14.38□□□□□ -0.11
VCAN-212ENST00000515397 EYA2O00167 538 aa14.37□□□□□ -0.11
VCAN-212ENST00000515397 SASH1O94885 1247 aa14.37□□□□□ -0.11
VCAN-212ENST00000515397 IL1R1P14778 569 aa14.37□□□□□ -0.11
VCAN-212ENST00000515397 HIBADHP31937 336 aaKnown RBP14.37□□□□□ -0.11
VCAN-212ENST00000515397 BCAMP50895 628 aa14.37□□□□□ -0.11
VCAN-212ENST00000515397 ZKSCAN2Q63HK3 967 aa14.37□□□□□ -0.11
VCAN-212ENST00000515397 ATG9AQ7Z3C6 839 aa14.37□□□□□ -0.11
VCAN-212ENST00000515397 VGLL2Q8N8G2 317 aa14.37□□□□□ -0.11
VCAN-212ENST00000515397 CNTNAP1P78357 1384 aa14.36□□□□□ -0.11
VCAN-212ENST00000515397 PDE8BO95263 885 aa14.36□□□□□ -0.11
VCAN-212ENST00000515397 RLBP1P12271 317 aa14.36□□□□□ -0.11
VCAN-212ENST00000515397 CHAF1AQ13111 956 aaPredicted RBP14.36□□□□□ -0.11
VCAN-212ENST00000515397 CYP4F22Q6NT55 531 aa14.36□□□□□ -0.11
VCAN-212ENST00000515397 OGFOD1Q8N543 542 aa14.36□□□□□ -0.11
VCAN-212ENST00000515397 POLR2AP24928 1970 aaKnown RBP14.36□□□□□ -0.11
VCAN-212ENST00000515397 WNT10BO00744 389 aa14.35□□□□□ -0.11
VCAN-212ENST00000515397 GNAI3P08754 354 aa14.35□□□□□ -0.11
VCAN-212ENST00000515397 GRIK5Q16478 980 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms