RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 CCDC85BQ15834 202 aaPredicted RBP6.24□□□□□ -1.41
HERC6-208ENST00000515365 RAB44Q7Z6P3 723 aaPredicted RBP6.24□□□□□ -1.41
HERC6-208ENST00000515365 DHX38Q92620 1227 aaKnown RBP6.24□□□□□ -1.41
HERC6-208ENST00000515365 KIFC2Q96AC6 838 aa6.24□□□□□ -1.41
HERC6-208ENST00000515365 DZANK1Q9NVP4 752 aa6.24□□□□□ -1.41
HERC6-208ENST00000515365 NFKBIEO00221 500 aa6.23□□□□□ -1.41
HERC6-208ENST00000515365 PWP1Q13610 501 aa6.23□□□□□ -1.41
HERC6-208ENST00000515365 LAPTM4AQ15012 233 aa6.23□□□□□ -1.41
HERC6-208ENST00000515365 DTHD1Q6ZMT9 781 aa6.23□□□□□ -1.41
HERC6-208ENST00000515365 SV2BQ7L1I2 683 aa6.23□□□□□ -1.41
HERC6-208ENST00000515365 GTPBP3Q969Y2 492 aaKnown RBP6.23□□□□□ -1.41
HERC6-208ENST00000515365 GPRASP2Q96D09 838 aa6.23□□□□□ -1.41
HERC6-208ENST00000515365 NSUN5Q96P11 429 aaKnown RBP6.23□□□□□ -1.41
HERC6-208ENST00000515365 TRIM56Q9BRZ2 755 aaKnown RBP6.23□□□□□ -1.41
HERC6-208ENST00000515365 BHLHE41Q9C0J9 482 aaPredicted RBP6.23□□□□□ -1.41
HERC6-208ENST00000515365 ZFYVE1Q9HBF4 777 aa6.23□□□□□ -1.41
HERC6-208ENST00000515365 SENP2Q9HC62 589 aa6.23□□□□□ -1.41
HERC6-208ENST00000515365 AKAP2Q9Y2D5 859 aa6.23□□□□□ -1.41
HERC6-208ENST00000515365 FGRP09769 529 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 FGFR3P22607 806 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 ITPKAP23677 461 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 GRIA4P48058 902 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 GPLD1P80108 840 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 NEUROD1Q13562 356 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 DPH6Q7L8W6 267 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 VPS37DQ86XT2 251 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 MCF2L2Q86YR7 1114 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 RELL1Q8IUW5 271 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 TMEM102Q8N9M5 508 aaPredicted RBP6.22□□□□□ -1.41
HERC6-208ENST00000515365 TRPM4Q8TD43 1214 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 RASGRP4Q8TDF6 673 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 TRIM47Q96LD4 638 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 TMEM74Q96NL1 305 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 HHIPQ96QV1 700 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 DNAJC2Q99543 621 aaKnown RBP6.22□□□□□ -1.41
HERC6-208ENST00000515365 ADAMTS1Q9UHI8 967 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 PHF24Q9UPV7 400 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 UNC13AQ9UPW8 1703 aa6.22□□□□□ -1.41
HERC6-208ENST00000515365 FBXO24O75426 580 aa6.21□□□□□ -1.42
HERC6-208ENST00000515365 TRPA1O75762 1119 aa6.21□□□□□ -1.42
HERC6-208ENST00000515365 RLBP1P12271 317 aa6.21□□□□□ -1.42
HERC6-208ENST00000515365 ATF4P18848 351 aaPredicted RBP6.21□□□□□ -1.42
HERC6-208ENST00000515365 GTF2F1P35269 517 aaKnown RBP eCLIP6.21□□□□□ -1.42
HERC6-208ENST00000515365 SPRED3Q2MJR0 410 aa6.21□□□□□ -1.42
HERC6-208ENST00000515365 TPTE2Q6XPS3 522 aa6.21□□□□□ -1.42
HERC6-208ENST00000515365 KIAA0825Q8IV33 1275 aa6.21□□□□□ -1.42
HERC6-208ENST00000515365 NXPE3Q969Y0 559 aa6.21□□□□□ -1.42
HERC6-208ENST00000515365 SPON2Q9BUD6 331 aa6.21□□□□□ -1.42
HERC6-208ENST00000515365 CEP44Q9C0F1 390 aa6.21□□□□□ -1.42
HERC6-208ENST00000515365 LOC102724428A0A0B4J2F2 783 aa6.2□□□□□ -1.42
HERC6-208ENST00000515365 METTL12A8MUP2 240 aa6.2□□□□□ -1.42
HERC6-208ENST00000515365 ZBTB42B2RXF5 422 aa6.2□□□□□ -1.42
HERC6-208ENST00000515365 F6X3S4 739 aa6.2□□□□□ -1.42
HERC6-208ENST00000515365 GBP2P32456 591 aaPredicted RBP6.2□□□□□ -1.42
HERC6-208ENST00000515365 SIK1P57059 783 aa6.2□□□□□ -1.42
HERC6-208ENST00000515365 CTBSQ01459 385 aa6.2□□□□□ -1.42
HERC6-208ENST00000515365 RBL2Q08999 1139 aa6.2□□□□□ -1.42
HERC6-208ENST00000515365 RPS26P11Q5JNZ5 115 aaPredicted RBP6.2□□□□□ -1.42
HERC6-208ENST00000515365 SPACA7Q96KW9 195 aa6.2□□□□□ -1.42
HERC6-208ENST00000515365 RHOVQ96L33 236 aa6.2□□□□□ -1.42
HERC6-208ENST00000515365 PBX4Q9BYU1 374 aa6.2□□□□□ -1.42
HERC6-208ENST00000515365 LNPKQ9C0E8 428 aa6.2□□□□□ -1.42
HERC6-208ENST00000515365 KCNQ5Q9NR82 932 aa6.2□□□□□ -1.42
HERC6-208ENST00000515365 A0A096LPE4 126 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 A0A1W2PPZ6 126 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 MINDY4BA8MYZ0 360 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 J3QW42 95 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 PDE2AO00408 941 aaPredicted RBP6.19□□□□□ -1.42
HERC6-208ENST00000515365 CELA3AP09093 270 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 EIF4A3P38919 411 aaKnown RBP6.19□□□□□ -1.42
HERC6-208ENST00000515365 LIG3P49916 1009 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 ATP11AP98196 1134 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 MLLT1Q03111 559 aaPredicted RBP6.19□□□□□ -1.42
HERC6-208ENST00000515365 MAP3K11Q16584 847 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 FAM177A1Q8N128 213 aaPredicted RBP6.19□□□□□ -1.42
HERC6-208ENST00000515365 PHC3Q8NDX5 983 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 SPATA32Q96LK8 384 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 NECAB3Q96P71 396 aaPredicted RBP6.19□□□□□ -1.42
HERC6-208ENST00000515365 TRERF1Q96PN7 1200 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.19□□□□□ -1.42
HERC6-208ENST00000515365 RASSF4Q9H2L5 321 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 ZNF576Q9H609 170 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 SEC31BQ9NQW1 1179 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 ARAP1Q96P48 1450 aa6.19□□□□□ -1.42
HERC6-208ENST00000515365 ENC1O14682 589 aa6.18□□□□□ -1.42
HERC6-208ENST00000515365 GARTP22102 1010 aa6.18□□□□□ -1.42
HERC6-208ENST00000515365 FAAP100Q0VG06 881 aa6.18□□□□□ -1.42
HERC6-208ENST00000515365 PCSK7Q16549 785 aa6.18□□□□□ -1.42
HERC6-208ENST00000515365 ZNF468Q5VIY5 522 aaPredicted RBP6.18□□□□□ -1.42
HERC6-208ENST00000515365 FOXR1Q6PIV2 292 aa6.18□□□□□ -1.42
HERC6-208ENST00000515365 HFE2Q6ZVN8 426 aa6.18□□□□□ -1.42
HERC6-208ENST00000515365 ZNF296Q8WUU4 475 aaPredicted RBP6.18□□□□□ -1.42
HERC6-208ENST00000515365 EAF1Q96JC9 268 aaPredicted RBP6.18□□□□□ -1.42
HERC6-208ENST00000515365 SEC16BQ96JE7 1060 aa6.18□□□□□ -1.42
HERC6-208ENST00000515365 DNAJB12Q9NXW2 375 aaKnown RBP6.18□□□□□ -1.42
HERC6-208ENST00000515365 GMPR2Q9P2T1 348 aaKnown RBP6.18□□□□□ -1.42
HERC6-208ENST00000515365 THOC2Q8NI27 1593 aaKnown RBP6.18□□□□□ -1.42
HERC6-208ENST00000515365 GPR25O00155 361 aa6.17□□□□□ -1.42
HERC6-208ENST00000515365 PPFIA3O75145 1194 aa6.17□□□□□ -1.42
HERC6-208ENST00000515365 SIN3BO75182 1162 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms