RNA–Protein interactions for RNA: ENST00000515351.1

PCDH1-208, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-208ENST00000515351 KIF6Q6ZMV9 814 aa17.67■□□□□ 0.42
PCDH1-208ENST00000515351 RBM43Q6ZSC3 357 aaKnown RBP17.67■□□□□ 0.42
PCDH1-208ENST00000515351 VSIG10Q8N0Z9 540 aa17.67■□□□□ 0.42
PCDH1-208ENST00000515351 FAM200AQ8TCP9 573 aa17.67■□□□□ 0.42
PCDH1-208ENST00000515351 CFAP45Q9UL16 551 aa17.67■□□□□ 0.42
PCDH1-208ENST00000515351 MRVI1Q9Y6F6 885 aa17.67■□□□□ 0.42
PCDH1-208ENST00000515351 NHSL1Q5SYE7 1610 aa17.67■□□□□ 0.42
PCDH1-208ENST00000515351 LRRFIP1Q32MZ4 808 aaKnown RBP17.66■□□□□ 0.42
PCDH1-208ENST00000515351 MPNDQ8N594 471 aa17.66■□□□□ 0.42
PCDH1-208ENST00000515351 OSBP2Q969R2 916 aa17.66■□□□□ 0.42
PCDH1-208ENST00000515351 XAGE2Q96GT9 111 aa17.66■□□□□ 0.42
PCDH1-208ENST00000515351 TEX13AQ9BXU3 409 aaPredicted RBP17.66■□□□□ 0.42
PCDH1-208ENST00000515351 CLSTN2Q9H4D0 955 aa17.66■□□□□ 0.42
PCDH1-208ENST00000515351 PTPDC1A2A3K4 754 aa17.66■□□□□ 0.42
PCDH1-208ENST00000515351 ADORA1P30542 326 aa17.66■□□□□ 0.42
PCDH1-208ENST00000515351 TTC39AQ5SRH9 613 aa17.66■□□□□ 0.42
PCDH1-208ENST00000515351 GORABQ5T7V8 394 aa17.66■□□□□ 0.42
PCDH1-208ENST00000515351 DNAJC10Q8IXB1 793 aa17.66■□□□□ 0.42
PCDH1-208ENST00000515351 ZNF830Q96NB3 372 aaPredicted RBP17.66■□□□□ 0.42
PCDH1-208ENST00000515351 CSF1RP07333 972 aa17.65■□□□□ 0.42
PCDH1-208ENST00000515351 PLCB2Q00722 1185 aa17.65■□□□□ 0.42
PCDH1-208ENST00000515351 ZBTB38Q8NAP3 1195 aaPredicted RBP17.65■□□□□ 0.42
PCDH1-208ENST00000515351 FAM89AQ96GI7 184 aa17.65■□□□□ 0.42
PCDH1-208ENST00000515351 ASAP1Q9ULH1 1129 aa17.65■□□□□ 0.42
PCDH1-208ENST00000515351 KIF3AQ9Y496 699 aa17.65■□□□□ 0.42
PCDH1-208ENST00000515351 SALL1Q9NSC2 1324 aa17.65■□□□□ 0.42
PCDH1-208ENST00000515351 NR1I2O75469 434 aa17.65■□□□□ 0.42
PCDH1-208ENST00000515351 ZFYP08048 801 aaPredicted RBP17.65■□□□□ 0.42
PCDH1-208ENST00000515351 TTLL5Q6EMB2 1281 aa17.65■□□□□ 0.42
PCDH1-208ENST00000515351 CKAP2LQ8IYA6 745 aa17.65■□□□□ 0.42
PCDH1-208ENST00000515351 BICD2Q8TD16 824 aa17.65■□□□□ 0.42
PCDH1-208ENST00000515351 ZNF274Q96GC6 653 aaPredicted RBP17.65■□□□□ 0.42
PCDH1-208ENST00000515351 KAT6BQ8WYB5 2073 aa17.65■□□□□ 0.42
PCDH1-208ENST00000515351 ABCC12Q96J65 1359 aa17.65■□□□□ 0.42
PCDH1-208ENST00000515351 FBXL16Q8N461 479 aa17.64■□□□□ 0.42
PCDH1-208ENST00000515351 PIBF1Q8WXW3 757 aa17.64■□□□□ 0.42
PCDH1-208ENST00000515351 PIGBQ92521 554 aa17.64■□□□□ 0.42
PCDH1-208ENST00000515351 NUP98P52948 1817 aa17.64■□□□□ 0.41
PCDH1-208ENST00000515351 RIC1Q4ADV7 1423 aa17.64■□□□□ 0.41
PCDH1-208ENST00000515351 PDIA3P30101 505 aaKnown RBP17.64■□□□□ 0.41
PCDH1-208ENST00000515351 ADD1P35611 737 aaKnown RBP17.64■□□□□ 0.41
PCDH1-208ENST00000515351 CCT2P78371 535 aaKnown RBP17.64■□□□□ 0.41
PCDH1-208ENST00000515351 IFIT5Q13325 482 aaKnown RBP17.64■□□□□ 0.41
PCDH1-208ENST00000515351 TAF7LQ5H9L4 462 aa17.64■□□□□ 0.41
PCDH1-208ENST00000515351 CCDC85AQ96PX6 553 aaPredicted RBP17.64■□□□□ 0.41
PCDH1-208ENST00000515351 TTC12Q9H892 705 aaPredicted RBP17.64■□□□□ 0.41
PCDH1-208ENST00000515351 MYO5AQ9Y4I1 1855 aaKnown RBP17.64■□□□□ 0.41
PCDH1-208ENST00000515351 FOXP2O15409 715 aa17.63■□□□□ 0.41
PCDH1-208ENST00000515351 RRP9O43818 475 aaKnown RBP17.63■□□□□ 0.41
PCDH1-208ENST00000515351 NCOA5Q9HCD5 579 aaKnown RBP17.63■□□□□ 0.41
PCDH1-208ENST00000515351 CTNNA3Q9UI47 895 aa17.63■□□□□ 0.41
PCDH1-208ENST00000515351 STARD3NLO95772 234 aa17.63■□□□□ 0.41
PCDH1-208ENST00000515351 SCARF1Q14162 830 aa17.63■□□□□ 0.41
PCDH1-208ENST00000515351 CHST3Q7LGC8 479 aa17.63■□□□□ 0.41
PCDH1-208ENST00000515351 MAP3K15Q6ZN16 1313 aa17.63■□□□□ 0.41
PCDH1-208ENST00000515351 LRP6O75581 1613 aa17.63■□□□□ 0.41
PCDH1-208ENST00000515351 EVCP57679 992 aa17.62■□□□□ 0.41
PCDH1-208ENST00000515351 WASHC4Q2M389 1173 aa17.62■□□□□ 0.41
PCDH1-208ENST00000515351 GIGYF2Q6Y7W6 1299 aaKnown RBP17.62■□□□□ 0.41
PCDH1-208ENST00000515351 CHMP4CQ96CF2 233 aa17.62■□□□□ 0.41
PCDH1-208ENST00000515351 CDHR2Q9BYE9 1310 aa17.62■□□□□ 0.41
PCDH1-208ENST00000515351 ANO6Q4KMQ2 910 aa17.62■□□□□ 0.41
PCDH1-208ENST00000515351 LUZP1Q86V48 1076 aa17.62■□□□□ 0.41
PCDH1-208ENST00000515351 ZAP70P43403 619 aa17.61■□□□□ 0.41
PCDH1-208ENST00000515351 IMMTQ16891 758 aaKnown RBP17.61■□□□□ 0.41
PCDH1-208ENST00000515351 APPBP2Q92624 585 aa17.61■□□□□ 0.41
PCDH1-208ENST00000515351 RCOR1Q9UKL0 485 aa17.61■□□□□ 0.41
PCDH1-208ENST00000515351 NAP1L2Q9ULW6 460 aaPredicted RBP17.61■□□□□ 0.41
PCDH1-208ENST00000515351 FOSBP53539 338 aa17.61■□□□□ 0.41
PCDH1-208ENST00000515351 HSP90AA2PQ14568 343 aaPredicted RBP17.61■□□□□ 0.41
PCDH1-208ENST00000515351 ATL3Q6DD88 541 aa17.61■□□□□ 0.41
PCDH1-208ENST00000515351 SASS6Q6UVJ0 657 aa17.61■□□□□ 0.41
PCDH1-208ENST00000515351 CBX8Q9HC52 389 aa17.61■□□□□ 0.41
PCDH1-208ENST00000515351 ZNF335Q9H4Z2 1342 aaPredicted RBP17.61■□□□□ 0.41
PCDH1-208ENST00000515351 CARMIL3Q8ND23 1372 aa17.61■□□□□ 0.41
PCDH1-208ENST00000515351 CEBPZQ03701 1054 aaKnown RBP17.6■□□□□ 0.41
PCDH1-208ENST00000515351 NOLC1Q14978 699 aaKnown RBP eCLIP17.6■□□□□ 0.41
PCDH1-208ENST00000515351 RIPOR2Q9Y4F9 1068 aa17.6■□□□□ 0.41
PCDH1-208ENST00000515351 FGAP02671 866 aa17.6■□□□□ 0.41
PCDH1-208ENST00000515351 TPM3P06753 285 aa17.6■□□□□ 0.41
PCDH1-208ENST00000515351 HLFQ16534 295 aa17.6■□□□□ 0.41
PCDH1-208ENST00000515351 ATP2B3Q16720 1220 aa17.6■□□□□ 0.41
PCDH1-208ENST00000515351 NLRP10Q86W26 655 aa17.6■□□□□ 0.41
PCDH1-208ENST00000515351 SYNE4Q8N205 404 aa17.6■□□□□ 0.41
PCDH1-208ENST00000515351 UQCRHLA0A096LP55 91 aa17.59■□□□□ 0.41
PCDH1-208ENST00000515351 UQCRHP07919 91 aa17.59■□□□□ 0.41
PCDH1-208ENST00000515351 PI16Q6UXB8 463 aa17.59■□□□□ 0.41
PCDH1-208ENST00000515351 TTLL11Q8NHH1 800 aa17.59■□□□□ 0.41
PCDH1-208ENST00000515351 PUS7LQ9H0K6 701 aaKnown RBP17.59■□□□□ 0.41
PCDH1-208ENST00000515351 HAND2P61296 217 aa17.59■□□□□ 0.41
PCDH1-208ENST00000515351 METTL24Q5JXM2 366 aa17.59■□□□□ 0.41
PCDH1-208ENST00000515351 ZNF396Q96N95 335 aaPredicted RBP17.59■□□□□ 0.41
PCDH1-208ENST00000515351 FTOQ9C0B1 505 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCDH1-208ENST00000515351 SPTLC3Q9NUV7 552 aa17.59■□□□□ 0.41
PCDH1-208ENST00000515351 GOLGA6L6A8MZA4 724 aa17.58■□□□□ 0.41
PCDH1-208ENST00000515351 ITGA6P23229 1130 aa17.58■□□□□ 0.41
PCDH1-208ENST00000515351 GPTP24298 496 aa17.58■□□□□ 0.41
PCDH1-208ENST00000515351 LDHAL6AQ6ZMR3 332 aa17.58■□□□□ 0.41
PCDH1-208ENST00000515351 USP28Q96RU2 1077 aa17.58■□□□□ 0.41
PCDH1-208ENST00000515351 GREM2Q9H772 168 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms