RNA–Protein interactions for RNA: ENST00000515215.6

SNCAIP-221, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,708 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-221ENST00000515215 PPEF1O14829 653 aaPredicted RBP15.24■□□□□ 0.03
SNCAIP-221ENST00000515215 MCAMP43121 646 aa15.24■□□□□ 0.03
SNCAIP-221ENST00000515215 SP8Q8IXZ3 490 aa15.24■□□□□ 0.03
SNCAIP-221ENST00000515215 DNAJC2Q99543 621 aaKnown RBP15.24■□□□□ 0.03
SNCAIP-221ENST00000515215 SLX4Q8IY92 1834 aa15.24■□□□□ 0.03
SNCAIP-221ENST00000515215 UQCRFS1P1P0C7P4 283 aa15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 SGIP1Q9BQI5 828 aa15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 PAG1Q9NWQ8 432 aa15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 PODXL2Q9NZ53 605 aa15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 ATF5Q9Y2D1 282 aaPredicted RBP15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 LEMD3Q9Y2U8 911 aa15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 ATP6V0A2Q9Y487 856 aa15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 RBM19Q9Y4C8 960 aaKnown RBP15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 RFX7Q2KHR2 1363 aa15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 PSDA5PKW4 1024 aaPredicted RBP15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 KLRK1P26718 216 aa15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 CHRNA5P30532 468 aa15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 BCAMP50895 628 aa15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 GPSM2P81274 684 aa15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
SNCAIP-221ENST00000515215 MYH7P12883 1935 aa15.22■□□□□ 0.03
SNCAIP-221ENST00000515215 MYO5AQ9Y4I1 1855 aaKnown RBP15.22■□□□□ 0.03
SNCAIP-221ENST00000515215 KCNJ4P48050 445 aa15.22■□□□□ 0.03
SNCAIP-221ENST00000515215 PI16Q6UXB8 463 aa15.22■□□□□ 0.03
SNCAIP-221ENST00000515215 KBTBD3Q8NAB2 608 aa15.22■□□□□ 0.03
SNCAIP-221ENST00000515215 ZNF622Q969S3 477 aaKnown RBP eCLIP15.22■□□□□ 0.03
SNCAIP-221ENST00000515215 FAM84BQ96KN1 310 aaPredicted RBP15.22■□□□□ 0.03
SNCAIP-221ENST00000515215 ANKIB1Q9P2G1 1089 aa15.22■□□□□ 0.03
SNCAIP-221ENST00000515215 DUOX1Q9NRD9 1551 aa15.22■□□□□ 0.03
SNCAIP-221ENST00000515215 MYH13Q9UKX3 1938 aa15.22■□□□□ 0.03
SNCAIP-221ENST00000515215 DOCK2Q92608 1830 aa15.21■□□□□ 0.03
SNCAIP-221ENST00000515215 GOLIM4O00461 696 aa15.21■□□□□ 0.03
SNCAIP-221ENST00000515215 ZBTB22O15209 634 aa15.21■□□□□ 0.03
SNCAIP-221ENST00000515215 POLD1P28340 1107 aa15.21■□□□□ 0.03
SNCAIP-221ENST00000515215 ZAP70P43403 619 aa15.21■□□□□ 0.03
SNCAIP-221ENST00000515215 GYG1P46976 350 aa15.21■□□□□ 0.03
SNCAIP-221ENST00000515215 MFAP1P55081 439 aaKnown RBP15.21■□□□□ 0.03
SNCAIP-221ENST00000515215 C15orf52Q6ZUT6 534 aaKnown RBP15.21■□□□□ 0.03
SNCAIP-221ENST00000515215 FBXO33Q7Z6M2 555 aa15.21■□□□□ 0.03
SNCAIP-221ENST00000515215 ESYT1Q9BSJ8 1104 aa15.21■□□□□ 0.03
SNCAIP-221ENST00000515215 FSD1Q9BTV5 496 aa15.21■□□□□ 0.03
SNCAIP-221ENST00000515215 ANTXR1Q9H6X2 564 aa15.21■□□□□ 0.03
SNCAIP-221ENST00000515215 ATP2B4P23634 1241 aa15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 FKBP4Q02790 459 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 RASGRF1Q13972 1273 aa15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 TXNRD3Q86VQ6 643 aa15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 TICAM2Q86XR7 235 aa15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 CNKSR1Q969H4 720 aa15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 IL25Q9H293 177 aa15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 SNRKQ9NRH2 765 aa15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 HMG20BQ9P0W2 317 aa15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 NSFL1CQ9UNZ2 370 aaKnown RBP15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 HIP1O00291 1037 aa15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 CAVIN4Q5BKX8 364 aa15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 PRPF40BQ6NWY9 871 aaKnown RBP15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 GGA1Q9UJY5 639 aa15.2■□□□□ 0.02
SNCAIP-221ENST00000515215 COL1A1P02452 1464 aaPredicted RBP15.19■□□□□ 0.02
SNCAIP-221ENST00000515215 SNED1Q8TER0 1413 aa15.19■□□□□ 0.02
SNCAIP-221ENST00000515215 EIF5BO60841 1220 aaKnown RBP15.19■□□□□ 0.02
SNCAIP-221ENST00000515215 CYP2E1P05181 493 aaPredicted RBP15.19■□□□□ 0.02
SNCAIP-221ENST00000515215 KCNA3P22001 575 aa15.19■□□□□ 0.02
SNCAIP-221ENST00000515215 PTGER2P43116 358 aa15.19■□□□□ 0.02
SNCAIP-221ENST00000515215 TBC1D16Q8TBP0 767 aa15.19■□□□□ 0.02
SNCAIP-221ENST00000515215 POLLQ9UGP5 575 aa15.19■□□□□ 0.02
SNCAIP-221ENST00000515215 BRCA1P38398 1863 aaKnown RBP15.19■□□□□ 0.02
SNCAIP-221ENST00000515215 SGSM2O43147 1006 aa15.18■□□□□ 0.02
SNCAIP-221ENST00000515215 UFL1O94874 794 aa15.18■□□□□ 0.02
SNCAIP-221ENST00000515215 OLFM4Q6UX06 510 aa15.18■□□□□ 0.02
SNCAIP-221ENST00000515215 SPATA5Q8NB90 893 aa15.18■□□□□ 0.02
SNCAIP-221ENST00000515215 C7orf43Q8WVR3 580 aa15.18■□□□□ 0.02
SNCAIP-221ENST00000515215 DIAPH3Q9NSV4 1193 aa15.18■□□□□ 0.02
SNCAIP-221ENST00000515215 HIBADHP31937 336 aaKnown RBP15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 CWC27Q6UX04 472 aaKnown RBP15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 FAM227BQ96M60 508 aa15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 TBC1D32Q96NH3 1257 aa15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 UPF2Q9HAU5 1272 aaKnown RBP15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 GNL3LQ9NVN8 582 aaKnown RBP15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 MED23Q9ULK4 1368 aa15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 SEMA3EO15041 775 aa15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 CHGBP05060 677 aa15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 DPEP1P16444 411 aa15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 TGFB2P61812 414 aa15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 NMIQ13287 307 aaPredicted RBP15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 TTF1Q15361 905 aaPredicted RBP15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 GPR101Q96P66 508 aaPredicted RBP15.17■□□□□ 0.02
SNCAIP-221ENST00000515215 PDS5AQ29RF7 1337 aaKnown RBP15.16■□□□□ 0.02
SNCAIP-221ENST00000515215 RAD50Q92878 1312 aa15.16■□□□□ 0.02
SNCAIP-221ENST00000515215 A0A0D9SFI3 127 aa15.16■□□□□ 0.02
SNCAIP-221ENST00000515215 REC8O95072 547 aa15.16■□□□□ 0.02
SNCAIP-221ENST00000515215 VPS37DQ86XT2 251 aa15.16■□□□□ 0.02
SNCAIP-221ENST00000515215 MPNDQ8N594 471 aa15.16■□□□□ 0.02
SNCAIP-221ENST00000515215 RUFY2Q8WXA3 655 aa15.16■□□□□ 0.02
SNCAIP-221ENST00000515215 USP26Q9BXU7 913 aa15.16■□□□□ 0.02
SNCAIP-221ENST00000515215 PIH1D3Q9NQM4 214 aaKnown RBP15.16■□□□□ 0.02
SNCAIP-221ENST00000515215 DENND2AQ9ULE3 1009 aa15.16■□□□□ 0.02
SNCAIP-221ENST00000515215 IQSEC3Q9UPP2 1182 aaPredicted RBP15.16■□□□□ 0.02
SNCAIP-221ENST00000515215 A0A0G2JLW4 131 aa15.15■□□□□ 0.02
SNCAIP-221ENST00000515215 C22orf23Q9BZE7 217 aa15.15■□□□□ 0.02
SNCAIP-221ENST00000515215 RBM25P49756 843 aaKnown RBP15.14■□□□□ 0.01
SNCAIP-221ENST00000515215 DPP8Q6V1X1 898 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms