RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 CNNM1Q9NRU3 951 aa16.47■□□□□ 0.23
CDK7-212ENST00000515180 A0A1B0GUL6 1792 aa16.46■□□□□ 0.23
CDK7-212ENST00000515180 USP17L3A6NCW0 530 aa16.46■□□□□ 0.23
CDK7-212ENST00000515180 USP17L4A6NCW7 530 aa16.46■□□□□ 0.23
CDK7-212ENST00000515180 RPS12P25398 132 aaKnown RBP16.46■□□□□ 0.23
CDK7-212ENST00000515180 USP17L1Q7RTZ2 530 aa16.46■□□□□ 0.23
CDK7-212ENST00000515180 CEP350Q5VT06 3117 aa16.46■□□□□ 0.23
CDK7-212ENST00000515180 PSME4Q14997 1843 aa16.45■□□□□ 0.22
CDK7-212ENST00000515180 RABL6Q3YEC7 729 aaPredicted RBP16.45■□□□□ 0.22
CDK7-212ENST00000515180 JMYQ8N9B5 988 aa16.45■□□□□ 0.22
CDK7-212ENST00000515180 COA1Q9GZY4 146 aa16.45■□□□□ 0.22
CDK7-212ENST00000515180 PGAP2Q9UHJ9 254 aa16.45■□□□□ 0.22
CDK7-212ENST00000515180 ASTN2O75129 1339 aaPredicted RBP16.45■□□□□ 0.22
CDK7-212ENST00000515180 IRS2Q9Y4H2 1338 aa16.45■□□□□ 0.22
CDK7-212ENST00000515180 BCAR3O75815 825 aa16.44■□□□□ 0.22
CDK7-212ENST00000515180 BRPF1P55201 1214 aaPredicted RBP16.44■□□□□ 0.22
CDK7-212ENST00000515180 KLHDC4Q8TBB5 520 aa16.44■□□□□ 0.22
CDK7-212ENST00000515180 GMLQ99445 158 aa16.44■□□□□ 0.22
CDK7-212ENST00000515180 API5Q9BZZ5 524 aaKnown RBP16.44■□□□□ 0.22
CDK7-212ENST00000515180 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
CDK7-212ENST00000515180 KIF4BQ2VIQ3 1234 aa16.43■□□□□ 0.22
CDK7-212ENST00000515180 LRRC24Q50LG9 513 aa16.43■□□□□ 0.22
CDK7-212ENST00000515180 DACT2Q5SW24 774 aa16.43■□□□□ 0.22
CDK7-212ENST00000515180 CST9Q5W186 159 aa16.43■□□□□ 0.22
CDK7-212ENST00000515180 USP48Q86UV5 1035 aa16.43■□□□□ 0.22
CDK7-212ENST00000515180 AGBL3Q8NEM8 1001 aa16.43■□□□□ 0.22
CDK7-212ENST00000515180 ZC3H15Q8WU90 426 aaKnown RBP16.43■□□□□ 0.22
CDK7-212ENST00000515180 CD209Q9NNX6 404 aa16.43■□□□□ 0.22
CDK7-212ENST00000515180 ZNF646O15015 1829 aaPredicted RBP16.42■□□□□ 0.22
CDK7-212ENST00000515180 POLR2AP24928 1970 aaKnown RBP16.42■□□□□ 0.22
CDK7-212ENST00000515180 CNTNAP1P78357 1384 aa16.42■□□□□ 0.22
CDK7-212ENST00000515180 GTF2IP78347 998 aa16.42■□□□□ 0.22
CDK7-212ENST00000515180 ABT1Q9ULW3 272 aaKnown RBP16.42■□□□□ 0.22
CDK7-212ENST00000515180 USP17L8P0C7I0 530 aa16.41■□□□□ 0.22
CDK7-212ENST00000515180 ZNF280AP59817 542 aaPredicted RBP16.41■□□□□ 0.22
CDK7-212ENST00000515180 STRIP1Q5VSL9 837 aa16.41■□□□□ 0.22
CDK7-212ENST00000515180 TTLL5Q6EMB2 1281 aa16.41■□□□□ 0.22
CDK7-212ENST00000515180 CDC37L1Q7L3B6 337 aa16.41■□□□□ 0.22
CDK7-212ENST00000515180 FRAT1Q92837 279 aaPredicted RBP16.41■□□□□ 0.22
CDK7-212ENST00000515180 ZNF408Q9H9D4 720 aa16.41■□□□□ 0.22
CDK7-212ENST00000515180 RIPOR2Q9Y4F9 1068 aa16.41■□□□□ 0.22
CDK7-212ENST00000515180 TRPM7Q96QT4 1865 aa16.41■□□□□ 0.22
CDK7-212ENST00000515180 ADM5C9JUS6 153 aa16.4■□□□□ 0.22
CDK7-212ENST00000515180 CELF2O95319 508 aaKnown RBP16.4■□□□□ 0.22
CDK7-212ENST00000515180 UBTFL1P0CB47 393 aaPredicted RBP16.4■□□□□ 0.22
CDK7-212ENST00000515180 VEGFBP49765 207 aa16.4■□□□□ 0.22
CDK7-212ENST00000515180 SCARF1Q14162 830 aa16.4■□□□□ 0.22
CDK7-212ENST00000515180 DEFB115Q30KQ5 88 aa16.4■□□□□ 0.22
CDK7-212ENST00000515180 C15orf52Q6ZUT6 534 aaKnown RBP16.4■□□□□ 0.22
CDK7-212ENST00000515180 MYOZ2Q9NPC6 264 aa16.4■□□□□ 0.22
CDK7-212ENST00000515180 JAG2Q9Y219 1238 aa16.4■□□□□ 0.22
CDK7-212ENST00000515180 ZNF609O15014 1411 aa16.39■□□□□ 0.21
CDK7-212ENST00000515180 RFX5P48382 616 aaPredicted RBP16.39■□□□□ 0.21
CDK7-212ENST00000515180 KRT26Q7Z3Y9 468 aa16.39■□□□□ 0.21
CDK7-212ENST00000515180 DCPSQ96C86 337 aaKnown RBP16.39■□□□□ 0.21
CDK7-212ENST00000515180 MEIS3Q99687 375 aa16.39■□□□□ 0.21
CDK7-212ENST00000515180 GGA3Q9NZ52 723 aa16.39■□□□□ 0.21
CDK7-212ENST00000515180 SCAF8Q9UPN6 1271 aaKnown RBP16.39■□□□□ 0.21
CDK7-212ENST00000515180 LRRFIP2Q9Y608 721 aaKnown RBP16.39■□□□□ 0.21
CDK7-212ENST00000515180 KIF16BQ96L93 1317 aa16.39■□□□□ 0.21
CDK7-212ENST00000515180 RASSF10A6NK89 507 aa16.38■□□□□ 0.21
CDK7-212ENST00000515180 GYG1P46976 350 aa16.38■□□□□ 0.21
CDK7-212ENST00000515180 METTL24Q5JXM2 366 aa16.38■□□□□ 0.21
CDK7-212ENST00000515180 ANGEL2Q5VTE6 544 aaKnown RBP16.38■□□□□ 0.21
CDK7-212ENST00000515180 ZNF804AQ7Z570 1209 aa16.38■□□□□ 0.21
CDK7-212ENST00000515180 KIAA0825Q8IV33 1275 aa16.38■□□□□ 0.21
CDK7-212ENST00000515180 CERS5Q8N5B7 392 aa16.38■□□□□ 0.21
CDK7-212ENST00000515180 ARHGAP45Q92619 1136 aa16.38■□□□□ 0.21
CDK7-212ENST00000515180 CLUAP1Q96AJ1 413 aa16.38■□□□□ 0.21
CDK7-212ENST00000515180 HSPA1AP0DMV8 641 aaKnown RBP16.37■□□□□ 0.21
CDK7-212ENST00000515180 HSPA1BP0DMV9 641 aaKnown RBP16.37■□□□□ 0.21
CDK7-212ENST00000515180 TRIM27P14373 513 aa16.37■□□□□ 0.21
CDK7-212ENST00000515180 IL1R1P14778 569 aa16.37■□□□□ 0.21
CDK7-212ENST00000515180 GRM1Q13255 1194 aa16.37■□□□□ 0.21
CDK7-212ENST00000515180 UBE4AQ14139 1066 aa16.37■□□□□ 0.21
CDK7-212ENST00000515180 NBPF9Q3BBW0 867 aa16.37■□□□□ 0.21
CDK7-212ENST00000515180 INTS3Q68E01 1043 aaKnown RBP16.37■□□□□ 0.21
CDK7-212ENST00000515180 PAXIP1Q6ZW49 1069 aaPredicted RBP16.37■□□□□ 0.21
CDK7-212ENST00000515180 TLL2Q9Y6L7 1015 aa16.37■□□□□ 0.21
CDK7-212ENST00000515180 MROH5Q6ZUA9 1318 aa16.37■□□□□ 0.21
CDK7-212ENST00000515180 PTPN12Q05209 780 aaKnown RBP16.36■□□□□ 0.21
CDK7-212ENST00000515180 CYP4F22Q6NT55 531 aa16.36■□□□□ 0.21
CDK7-212ENST00000515180 FAM84BQ96KN1 310 aaPredicted RBP16.36■□□□□ 0.21
CDK7-212ENST00000515180 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
CDK7-212ENST00000515180 MYO3BQ8WXR4 1341 aa16.36■□□□□ 0.21
CDK7-212ENST00000515180 F8W031 263 aaPredicted RBP16.35■□□□□ 0.21
CDK7-212ENST00000515180 IPO8O15397 1037 aaKnown RBP16.35■□□□□ 0.21
CDK7-212ENST00000515180 SASH1O94885 1247 aa16.35■□□□□ 0.21
CDK7-212ENST00000515180 HIBADHP31937 336 aaKnown RBP16.35■□□□□ 0.21
CDK7-212ENST00000515180 ATF7IPQ6VMQ6 1270 aa16.35■□□□□ 0.21
CDK7-212ENST00000515180 SULF1Q8IWU6 871 aa16.35■□□□□ 0.21
CDK7-212ENST00000515180 OGFOD1Q8N543 542 aa16.35■□□□□ 0.21
CDK7-212ENST00000515180 VGLL2Q8N8G2 317 aa16.35■□□□□ 0.21
CDK7-212ENST00000515180 SIL1Q9H173 461 aa16.35■□□□□ 0.21
CDK7-212ENST00000515180 IQSEC3Q9UPP2 1182 aaPredicted RBP16.35■□□□□ 0.21
CDK7-212ENST00000515180 PCDHAC2Q9Y5I4 1007 aa16.35■□□□□ 0.21
CDK7-212ENST00000515180 WDR33Q9C0J8 1336 aaKnown RBP16.35■□□□□ 0.21
CDK7-212ENST00000515180 EYA2O00167 538 aa16.34■□□□□ 0.21
CDK7-212ENST00000515180 PDE8BO95263 885 aa16.34■□□□□ 0.21
CDK7-212ENST00000515180 SAPCD2Q86UD0 394 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms