RNA–Protein interactions for RNA: ENST00000515159.5

SLC38A9-222, Transcript of solute carrier family 38 member 9, human

TSL 2

Gene SLC38A9, Length 3,509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-222	ENST00000515159	VAMP4	O75379	141 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	F13A1	P00488	732 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	OAS2	P29728	719 aa	Known RBP	5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	SETDB1	Q15047	1291 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	NBPF3	Q9H094	633 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	CCDC151	A5D8V7	595 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	LIN7A	O14910	233 aa	Predicted RBP	5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	GCFC2	P16383	781 aa	Known RBP	5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	SYT1	P21579	422 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	ARID5B	Q14865	1188 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	CCDC112	Q8NEF3	446 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	CCDC26	Q8TAB7	109 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	SYAP1	Q96A49	352 aa	Predicted RBP	5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	EBF2	Q9HAK2	575 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	NOB1	Q9ULX3	412 aa	Known RBP	5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	KDM2A	Q9Y2K7	1162 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	MAP3K15	Q6ZN16	1313 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	CDHR2	Q9BYE9	1310 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	IKBKB	O14920	756 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	PPFIA3	O75145	1194 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	PPFIA4	O75335	1185 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	IFIT2	P09913	472 aa	Known RBP	5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	AMPD2	Q01433	879 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	APOBR	Q0VD83	1088 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	ERCC6L	Q2NKX8	1250 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	NBPF15	Q8N660	670 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	GPR161	Q8N6U8	529 aa	Known RBP	5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	CCDC191	Q8NCU4	936 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	AGAP3	Q96P47	875 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	ETAA1	Q9NY74	926 aa		5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	WDR33	Q9C0J8	1336 aa	Known RBP	5.28	□□□□□ -1.56
SLC38A9-222	ENST00000515159	NFAT5	O94916	1531 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159		A6NHS1	94 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	MGRN1	O60291	552 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	EPB41	P11171	864 aa	Known RBP	5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	ATP6V1A	P38606	617 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	AMPH	P49418	695 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	SKOR1	P84550	965 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	SMC1A	Q14683	1233 aa	Known RBP	5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	RUFY3	Q7L099	469 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	BRAP	Q7Z569	592 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	NPHP3	Q7Z494	1330 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	MST1R	Q04912	1400 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	PITPNM1	O00562	1244 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	MAGEA8	P43361	318 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	RAB27A	P51159	221 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	TYRO3	Q06418	890 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	DPY19L2	Q6NUT2	758 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	CCDC186	Q7Z3E2	898 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	SPDYE1	Q8NFV5	336 aa	Predicted RBP	5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	RABGGTA	Q92696	567 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	GNL3L	Q9NVN8	582 aa	Known RBP	5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	UBR2	Q8IWV8	1755 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	TOGARAM1	Q9Y4F4	1720 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	SLC8A3	P57103	927 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	SART3	Q15020	963 aa	Known RBP	5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	LEKR1	Q6ZMV7	388 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	AZIN2	Q96A70	460 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	ESYT1	Q9BSJ8	1104 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	CNPY2	Q9Y2B0	182 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	WDR17	Q8IZU2	1322 aa		5.27	□□□□□ -1.57
SLC38A9-222	ENST00000515159	RGPD2	P0DJD1	1756 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	BYSL	Q13895	437 aa	Known RBP	5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	WDR43	Q15061	677 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	PABPC1L	Q4VXU2	614 aa	Known RBP	5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	CC2D2B	Q6DHV5	1058 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	CEP85	Q6P2H3	762 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	TTC6	Q86TZ1	520 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	NCAPG2	Q86XI2	1143 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	ZFAND2B	Q8WV99	257 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	GTF3C6	Q969F1	213 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	PGBD1	Q96JS3	809 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	LSG1	Q9H089	658 aa	Known RBP	5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	TRPM3	Q9HCF6	1732 aa	Predicted RBP	5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	GPR75-ASB3	A0A0A6YYF3	556 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	EME2	A4GXA9	379 aa	Predicted RBP	5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	IPO8	O15397	1037 aa	Known RBP	5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	SKIL	P12757	684 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	SCP2	P22307	547 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	RXRB	P28702	533 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	TPM4	P67936	248 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	BRD3	Q15059	726 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	RBM12B	Q8IXT5	1001 aa	Known RBP	5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	TEX11	Q8IYF3	940 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	BAG1	Q99933	345 aa	Predicted RBP	5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	TM6SF1	Q9BZW5	370 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	ZCCHC17	Q9NP64	241 aa	Known RBP	5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	INTS13	Q9NVM9	706 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	HYPK	Q9NX55	129 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	RTEL1	Q9NZ71	1219 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	ASB3	Q9Y575	518 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	TMPO	P42166	694 aa	Known RBP	5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	SCRN1	Q12765	414 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	RCSD1	Q6JBY9	416 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	ZNF662	Q6ZS27	426 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	APTX	Q7Z2E3	356 aa	Known RBP	5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	RNF214	Q8ND24	703 aa		5.26	□□□□□ -1.57
SLC38A9-222	ENST00000515159	C16orf45	Q96MC5	204 aa	Predicted RBP	5.26	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms