RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 RIOK3O14730 519 aaKnown RBP15.1■□□□□ 0.01
TCOF1-214ENST00000515035 ALG1Q9BT22 464 aa15.1■□□□□ 0.01
TCOF1-214ENST00000515035 SNRKQ9NRH2 765 aa15.1■□□□□ 0.01
TCOF1-214ENST00000515035 ABCC2Q92887 1545 aa15.1■□□□□ 0.01
TCOF1-214ENST00000515035 PSMA7O14818 248 aa15.1■□□□□ 0.01
TCOF1-214ENST00000515035 BMP15O95972 392 aa15.1■□□□□ 0.01
TCOF1-214ENST00000515035 CCDC42Q96M95 316 aa15.1■□□□□ 0.01
TCOF1-214ENST00000515035 GRIPAP1Q4V328 841 aa15.1■□□□□ 0.01
TCOF1-214ENST00000515035 CFAP58Q5T655 872 aa15.1■□□□□ 0.01
TCOF1-214ENST00000515035 IFT81Q8WYA0 676 aa15.09■□□□□ 0.01
TCOF1-214ENST00000515035 UTP14AQ9BVJ6 771 aaKnown RBP15.09■□□□□ 0.01
TCOF1-214ENST00000515035 LRRC27Q9C0I9 530 aa15.09■□□□□ 0.01
TCOF1-214ENST00000515035 SAMD15Q9P1V8 674 aa15.09■□□□□ 0.01
TCOF1-214ENST00000515035 MYRIPQ8NFW9 859 aa15.09■□□□□ 0.01
TCOF1-214ENST00000515035 STIM2Q9P246 746 aa15.09■□□□□ 0.01
TCOF1-214ENST00000515035 TLDC2A0PJX2 215 aa15.09■□□□□ 0.01
TCOF1-214ENST00000515035 SPTLC2O15270 562 aa15.09■□□□□ 0.01
TCOF1-214ENST00000515035 NBPF7P0C2Y1 421 aaPredicted RBP15.09■□□□□ 0.01
TCOF1-214ENST00000515035 CPSF2Q9P2I0 782 aaKnown RBP15.09■□□□□ 0.01
TCOF1-214ENST00000515035 PPP4R3AQ6IN85 833 aa15.09■□□□□ 0.01
TCOF1-214ENST00000515035 STXBP4Q6ZWJ1 553 aa15.09■□□□□ 0.01
TCOF1-214ENST00000515035 TRMT112Q9UI30 125 aaKnown RBP15.09■□□□□ 0.01
TCOF1-214ENST00000515035 KRT13P13646 458 aa15.08■□□□□ 0.01
TCOF1-214ENST00000515035 DZIP1Q86YF9 867 aaKnown RBP15.08■□□□□ 0.01
TCOF1-214ENST00000515035 ARHGAP45Q92619 1136 aa15.08■□□□□ 0.01
TCOF1-214ENST00000515035 MFSD6Q6ZSS7 791 aa15.08■□□□□ 0
TCOF1-214ENST00000515035 DNAI2Q9GZS0 605 aa15.08■□□□□ 0
TCOF1-214ENST00000515035 STAT6P42226 847 aa15.08■□□□□ 0
TCOF1-214ENST00000515035 CHRNA2Q15822 529 aa15.08■□□□□ 0
TCOF1-214ENST00000515035 TSNARE1Q96NA8 513 aa15.08■□□□□ 0
TCOF1-214ENST00000515035 MMRN2Q9H8L6 949 aa15.08■□□□□ 0
TCOF1-214ENST00000515035 MBIPQ9NS73 344 aa15.08■□□□□ 0
TCOF1-214ENST00000515035 SLC5A1P13866 664 aa15.08■□□□□ 0
TCOF1-214ENST00000515035 LACTBP83111 547 aaPredicted RBP15.08■□□□□ 0
TCOF1-214ENST00000515035 CRACR2BQ8N4Y2 399 aaPredicted RBP15.08■□□□□ 0
TCOF1-214ENST00000515035 AFAP1L1Q8TED9 768 aa15.08■□□□□ 0
TCOF1-214ENST00000515035 PRPHP41219 470 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 B4GALNT4Q76KP1 1039 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 C19orf44Q9H6X5 657 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 IL16Q14005 1332 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 NDUFAB1O14561 156 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 CLGNO14967 610 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 ZBTB43O43298 467 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 TERF1P54274 439 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 SYCP3Q8IZU3 236 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 CUL5Q93034 780 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 SMIM23A6NLE4 172 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 CFAP57Q96MR6 1250 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 NUP160Q12769 1436 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 EIF4G3O43432 1585 aaKnown RBP15.07■□□□□ 0
TCOF1-214ENST00000515035 SEPT6Q14141 434 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 DDX46Q7L014 1031 aaKnown RBP15.07■□□□□ 0
TCOF1-214ENST00000515035 TBC1D5Q92609 795 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 RPGRQ92834 1020 aaKnown RBP15.07■□□□□ 0
TCOF1-214ENST00000515035 INTS4Q96HW7 963 aaKnown RBP15.07■□□□□ 0
TCOF1-214ENST00000515035 MEIS3Q99687 375 aa15.07■□□□□ 0
TCOF1-214ENST00000515035 Q6ZUG5 572 aa15.06■□□□□ 0
TCOF1-214ENST00000515035 ANKRD44Q8N8A2 993 aa15.06■□□□□ 0
TCOF1-214ENST00000515035 PPFIBP2Q8ND30 876 aa15.06■□□□□ 0
TCOF1-214ENST00000515035 PUS7Q96PZ0 661 aaKnown RBP15.06■□□□□ 0
TCOF1-214ENST00000515035 COMMD10Q9Y6G5 202 aa15.06■□□□□ 0
TCOF1-214ENST00000515035 INPP5BP32019 993 aa15.06■□□□□ 0
TCOF1-214ENST00000515035 SETDB1Q15047 1291 aa15.06■□□□□ 0
TCOF1-214ENST00000515035 TTF1Q15361 905 aaPredicted RBP15.06■□□□□ 0
TCOF1-214ENST00000515035 WDR62O43379 1518 aa15.06■□□□□ 0
TCOF1-214ENST00000515035 SEC24BO95487 1268 aa15.06■□□□□ 0
TCOF1-214ENST00000515035 LMBR1Q8WVP7 490 aa15.06■□□□□ 0
TCOF1-214ENST00000515035 NAP1L3Q99457 506 aaPredicted RBP15.06■□□□□ 0
TCOF1-214ENST00000515035 CTTNBP2Q8WZ74 1663 aa15.05■□□□□ 0
TCOF1-214ENST00000515035 VGLL3A8MV65 326 aa15.05■□□□□ 0
TCOF1-214ENST00000515035 DHX58Q96C10 678 aa15.05■□□□□ 0
TCOF1-214ENST00000515035 STX17P56962 302 aa15.05■□□□□ -0
TCOF1-214ENST00000515035 SREK1Q8WXA9 508 aaKnown RBP15.05■□□□□ -0
TCOF1-214ENST00000515035 FERMT2Q96AC1 680 aa15.05■□□□□ -0
TCOF1-214ENST00000515035 BAG1Q99933 345 aaPredicted RBP15.05■□□□□ -0
TCOF1-214ENST00000515035 AK2P54819 239 aa15.05■□□□□ -0
TCOF1-214ENST00000515035 ELF2Q15723 593 aa15.05■□□□□ -0
TCOF1-214ENST00000515035 ZNF526Q8TF50 670 aaPredicted RBP15.05■□□□□ -0
TCOF1-214ENST00000515035 PPP1R9BQ96SB3 815 aa15.05■□□□□ -0
TCOF1-214ENST00000515035 MAP3K2Q9Y2U5 619 aa15.05■□□□□ -0
TCOF1-214ENST00000515035 PI4KAP2A4QPH2 592 aa15.05■□□□□ -0
TCOF1-214ENST00000515035 TSPY2A6NKD2 308 aa15.05■□□□□ -0
TCOF1-214ENST00000515035 POTEDQ86YR6 584 aa15.05■□□□□ -0
TCOF1-214ENST00000515035 PI4KAP1Q8N8J0 262 aa15.05■□□□□ -0
TCOF1-214ENST00000515035 VAT1LQ9HCJ6 419 aa15.05■□□□□ -0
TCOF1-214ENST00000515035 ANKIB1Q9P2G1 1089 aa15.05■□□□□ -0
TCOF1-214ENST00000515035 ATP2A1O14983 1001 aa15.04■□□□□ -0
TCOF1-214ENST00000515035 TBCAO75347 108 aaKnown RBP15.04■□□□□ -0
TCOF1-214ENST00000515035 ARID5AQ03989 594 aa15.04■□□□□ -0
TCOF1-214ENST00000515035 WTAPQ15007 396 aa15.04■□□□□ -0
TCOF1-214ENST00000515035 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.04■□□□□ -0
TCOF1-214ENST00000515035 WDR66Q8TBY9 1149 aa15.04■□□□□ -0
TCOF1-214ENST00000515035 KAT14Q9H8E8 782 aa15.04■□□□□ -0
TCOF1-214ENST00000515035 ZMYM3Q14202 1370 aa15.04■□□□□ -0
TCOF1-214ENST00000515035 DISP3Q9P2K9 1392 aa15.04■□□□□ -0
TCOF1-214ENST00000515035 CLNS1AP54105 237 aaKnown RBP15.04■□□□□ -0
TCOF1-214ENST00000515035 TNNC1P63316 161 aa15.04■□□□□ -0
TCOF1-214ENST00000515035 C16orf71Q8IYS4 520 aaPredicted RBP15.04■□□□□ -0
TCOF1-214ENST00000515035 LUC7L2Q9Y383 392 aaKnown RBP15.04■□□□□ -0
TCOF1-214ENST00000515035 PARD3Q8TEW0 1356 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms