RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 ZFYP08048 801 aaPredicted RBP20.62■□□□□ 0.89
SNX2-213ENST00000514949 CAMK4Q16566 473 aa20.62■□□□□ 0.89
SNX2-213ENST00000514949 ZNF594Q96JF6 807 aaPredicted RBP20.62■□□□□ 0.89
SNX2-213ENST00000514949 AKAP2Q9Y2D5 859 aa20.62■□□□□ 0.89
SNX2-213ENST00000514949 GOLGA6L6A8MZA4 724 aa20.61■□□□□ 0.89
SNX2-213ENST00000514949 NR1I2O75469 434 aa20.61■□□□□ 0.89
SNX2-213ENST00000514949 DDX11Q96FC9 970 aa20.61■□□□□ 0.89
SNX2-213ENST00000514949 PRIMPOLQ96LW4 560 aa20.61■□□□□ 0.89
SNX2-213ENST00000514949 LRRC2Q9BYS8 371 aa20.61■□□□□ 0.89
SNX2-213ENST00000514949 PUS3Q9BZE2 481 aaKnown RBP20.6■□□□□ 0.89
SNX2-213ENST00000514949 PTPDC1A2A3K4 754 aa20.6■□□□□ 0.89
SNX2-213ENST00000514949 CSF1RP07333 972 aa20.6■□□□□ 0.89
SNX2-213ENST00000514949 APOBRQ0VD83 1088 aa20.6■□□□□ 0.89
SNX2-213ENST00000514949 CCDC57Q2TAC2 916 aa20.6■□□□□ 0.89
SNX2-213ENST00000514949 SLFNL1Q499Z3 407 aa20.6■□□□□ 0.89
SNX2-213ENST00000514949 VSIG10Q8N0Z9 540 aa20.6■□□□□ 0.89
SNX2-213ENST00000514949 TDRD7Q8NHU6 1098 aaKnown RBP20.6■□□□□ 0.89
SNX2-213ENST00000514949 KIAA1524Q8TCG1 905 aa20.6■□□□□ 0.89
SNX2-213ENST00000514949 CBX8Q9HC52 389 aa20.6■□□□□ 0.89
SNX2-213ENST00000514949 CTNNA3Q9UI47 895 aa20.6■□□□□ 0.89
SNX2-213ENST00000514949 PCCAP05165 728 aaPredicted RBP20.59■□□□□ 0.89
SNX2-213ENST00000514949 PDIA3P30101 505 aaKnown RBP20.59■□□□□ 0.89
SNX2-213ENST00000514949 ANO6Q4KMQ2 910 aa20.59■□□□□ 0.89
SNX2-213ENST00000514949 MAP7D2Q96T17 732 aa20.59■□□□□ 0.89
SNX2-213ENST00000514949 TEX13AQ9BXU3 409 aaPredicted RBP20.59■□□□□ 0.89
SNX2-213ENST00000514949 M0R2C6 588 aa20.59■□□□□ 0.89
SNX2-213ENST00000514949 CCDC158Q5M9N0 1113 aa20.59■□□□□ 0.89
SNX2-213ENST00000514949 CKAP2LQ8IYA6 745 aa20.59■□□□□ 0.89
SNX2-213ENST00000514949 BICD2Q8TD16 824 aa20.59■□□□□ 0.89
SNX2-213ENST00000514949 OSBP2Q969R2 916 aa20.59■□□□□ 0.89
SNX2-213ENST00000514949 CTAGE5O15320 804 aa20.58■□□□□ 0.89
SNX2-213ENST00000514949 KCNF1Q9H3M0 494 aa20.58■□□□□ 0.89
SNX2-213ENST00000514949 CCDC9Q9Y3X0 531 aaKnown RBP20.58■□□□□ 0.89
SNX2-213ENST00000514949 TOGARAM1Q9Y4F4 1720 aa20.58■□□□□ 0.88
SNX2-213ENST00000514949 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.57■□□□□ 0.88
SNX2-213ENST00000514949 LUZP1Q86V48 1076 aa20.57■□□□□ 0.88
SNX2-213ENST00000514949 MYRIPQ8NFW9 859 aa20.57■□□□□ 0.88
SNX2-213ENST00000514949 ABCA3Q99758 1704 aa20.57■□□□□ 0.88
SNX2-213ENST00000514949 FOXP2O15409 715 aa20.57■□□□□ 0.88
SNX2-213ENST00000514949 MPNDQ8N594 471 aa20.57■□□□□ 0.88
SNX2-213ENST00000514949 XAGE2Q96GT9 111 aa20.57■□□□□ 0.88
SNX2-213ENST00000514949 A0A0G2JLW4 131 aa20.56■□□□□ 0.88
SNX2-213ENST00000514949 PLCB2Q00722 1185 aa20.56■□□□□ 0.88
SNX2-213ENST00000514949 ZBTB38Q8NAP3 1195 aaPredicted RBP20.56■□□□□ 0.88
SNX2-213ENST00000514949 RGS22Q8NE09 1264 aa20.56■□□□□ 0.88
SNX2-213ENST00000514949 ZNF396Q96N95 335 aaPredicted RBP20.56■□□□□ 0.88
SNX2-213ENST00000514949 NWD2Q9ULI1 1742 aa20.56■□□□□ 0.88
SNX2-213ENST00000514949 GTF2F1P35269 517 aaKnown RBP eCLIP20.56■□□□□ 0.88
SNX2-213ENST00000514949 PLA2G4DQ86XP0 818 aa20.56■□□□□ 0.88
SNX2-213ENST00000514949 WDR19Q8NEZ3 1342 aa20.55■□□□□ 0.88
SNX2-213ENST00000514949 CDHR2Q9BYE9 1310 aa20.55■□□□□ 0.88
SNX2-213ENST00000514949 DDX60Q8IY21 1712 aaKnown RBP20.55■□□□□ 0.88
SNX2-213ENST00000514949 ZNF165P49910 485 aa20.54■□□□□ 0.88
SNX2-213ENST00000514949 TTC39AQ5SRH9 613 aa20.54■□□□□ 0.88
SNX2-213ENST00000514949 MTERF4Q7Z6M4 381 aaKnown RBP20.54■□□□□ 0.88
SNX2-213ENST00000514949 APPBP2Q92624 585 aa20.54■□□□□ 0.88
SNX2-213ENST00000514949 CARMIL3Q8ND23 1372 aa20.54■□□□□ 0.88
SNX2-213ENST00000514949 FKBP4Q02790 459 aaKnown RBP eCLIP20.54■□□□□ 0.88
SNX2-213ENST00000514949 ZNF512BQ96KM6 892 aaPredicted RBP20.54■□□□□ 0.88
SNX2-213ENST00000514949 TMOD3Q9NYL9 352 aa20.54■□□□□ 0.88
SNX2-213ENST00000514949 ADORA1P30542 326 aa20.53■□□□□ 0.88
SNX2-213ENST00000514949 CCT2P78371 535 aaKnown RBP20.53■□□□□ 0.88
SNX2-213ENST00000514949 SNW1Q13573 536 aaKnown RBP20.53■□□□□ 0.88
SNX2-213ENST00000514949 IMMTQ16891 758 aaKnown RBP20.53■□□□□ 0.88
SNX2-213ENST00000514949 TTLL5Q6EMB2 1281 aa20.53■□□□□ 0.88
SNX2-213ENST00000514949 ENGASEQ8NFI3 743 aa20.53■□□□□ 0.88
SNX2-213ENST00000514949 USP28Q96RU2 1077 aa20.53■□□□□ 0.88
SNX2-213ENST00000514949 FDPSP14324 419 aaKnown RBP20.53■□□□□ 0.88
SNX2-213ENST00000514949 ZNF75DP51815 510 aa20.53■□□□□ 0.88
SNX2-213ENST00000514949 IFIT5Q13325 482 aaKnown RBP20.53■□□□□ 0.88
SNX2-213ENST00000514949 KIF6Q6ZMV9 814 aa20.53■□□□□ 0.88
SNX2-213ENST00000514949 ILDR1Q86SU0 546 aaPredicted RBP20.53■□□□□ 0.88
SNX2-213ENST00000514949 NCOA5Q9HCD5 579 aaKnown RBP20.53■□□□□ 0.88
SNX2-213ENST00000514949 MYH7P12883 1935 aa20.52■□□□□ 0.88
SNX2-213ENST00000514949 FGAP02671 866 aa20.52■□□□□ 0.88
SNX2-213ENST00000514949 CDC25BP30305 580 aa20.52■□□□□ 0.88
SNX2-213ENST00000514949 GLIPR1L2Q4G1C9 344 aa20.52■□□□□ 0.88
SNX2-213ENST00000514949 DNTTIP2Q5QJE6 756 aaKnown RBP20.52■□□□□ 0.88
SNX2-213ENST00000514949 GORABQ5T7V8 394 aa20.52■□□□□ 0.88
SNX2-213ENST00000514949 SARM1Q6SZW1 724 aa20.52■□□□□ 0.88
SNX2-213ENST00000514949 CCAR1Q8IX12 1150 aaKnown RBP20.52■□□□□ 0.88
SNX2-213ENST00000514949 MB21D2Q8IYB1 491 aaPredicted RBP20.52■□□□□ 0.88
SNX2-213ENST00000514949 PYCARDQ9ULZ3 195 aa20.52■□□□□ 0.88
SNX2-213ENST00000514949 RIPOR2Q9Y4F9 1068 aa20.52■□□□□ 0.88
SNX2-213ENST00000514949 RIC1Q4ADV7 1423 aa20.52■□□□□ 0.88
SNX2-213ENST00000514949 IQCB1Q15051 598 aa20.51■□□□□ 0.87
SNX2-213ENST00000514949 GIGYF2Q6Y7W6 1299 aaKnown RBP20.51■□□□□ 0.87
SNX2-213ENST00000514949 SLAIN2Q9P270 581 aa20.51■□□□□ 0.87
SNX2-213ENST00000514949 DHX16O60231 1041 aaKnown RBP20.51■□□□□ 0.87
SNX2-213ENST00000514949 FAM160A1Q05DH4 1040 aa20.51■□□□□ 0.87
SNX2-213ENST00000514949 SPC24Q8NBT2 197 aa20.51■□□□□ 0.87
SNX2-213ENST00000514949 DNAJC25Q9H1X3 360 aa20.51■□□□□ 0.87
SNX2-213ENST00000514949 RTEL1Q9NZ71 1219 aa20.51■□□□□ 0.87
SNX2-213ENST00000514949 MAP3K15Q6ZN16 1313 aa20.51■□□□□ 0.87
SNX2-213ENST00000514949 STARD3NLO95772 234 aa20.5■□□□□ 0.87
SNX2-213ENST00000514949 SCARF1Q14162 830 aa20.5■□□□□ 0.87
SNX2-213ENST00000514949 C17orf53Q8N3J3 647 aaPredicted RBP20.5■□□□□ 0.87
SNX2-213ENST00000514949 FAM89AQ96GI7 184 aa20.5■□□□□ 0.87
SNX2-213ENST00000514949 AKAP11Q9UKA4 1901 aa20.5■□□□□ 0.87
SNX2-213ENST00000514949 ATRNO75882 1429 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms