RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 CEP44Q9C0F1 390 aa11.29□□□□□ -0.6
LDHBP3-201ENST00000514909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.29□□□□□ -0.6
LDHBP3-201ENST00000514909 NLGN1Q8N2Q7 840 aa11.28□□□□□ -0.6
LDHBP3-201ENST00000514909 PHC3Q8NDX5 983 aa11.28□□□□□ -0.6
LDHBP3-201ENST00000514909 TRIM56Q9BRZ2 755 aaKnown RBP11.28□□□□□ -0.6
LDHBP3-201ENST00000514909 ZNF408Q9H9D4 720 aa11.28□□□□□ -0.6
LDHBP3-201ENST00000514909 SUPT16HQ9Y5B9 1047 aaKnown RBP11.28□□□□□ -0.6
LDHBP3-201ENST00000514909 GREM1O60565 184 aa11.27□□□□□ -0.61
LDHBP3-201ENST00000514909 MAP3K6O95382 1288 aa11.27□□□□□ -0.61
LDHBP3-201ENST00000514909 RARAP10276 462 aa11.27□□□□□ -0.61
LDHBP3-201ENST00000514909 GARTP22102 1010 aa11.27□□□□□ -0.61
LDHBP3-201ENST00000514909 ITPKAP23677 461 aa11.27□□□□□ -0.61
LDHBP3-201ENST00000514909 TARSP26639 723 aaKnown RBP11.27□□□□□ -0.61
LDHBP3-201ENST00000514909 BMS1Q14692 1282 aaKnown RBP11.27□□□□□ -0.61
LDHBP3-201ENST00000514909 MRFAP1L1Q96HT8 127 aa11.27□□□□□ -0.61
LDHBP3-201ENST00000514909 CNTNAP3BQ96NU0 1288 aa11.27□□□□□ -0.61
LDHBP3-201ENST00000514909 CNTNAP3Q9BZ76 1288 aa11.27□□□□□ -0.61
LDHBP3-201ENST00000514909 AKAP2Q9Y2D5 859 aa11.27□□□□□ -0.61
LDHBP3-201ENST00000514909 MINDY4BA8MYZ0 360 aa11.26□□□□□ -0.61
LDHBP3-201ENST00000514909 ATXN7O15265 892 aaPredicted RBP11.26□□□□□ -0.61
LDHBP3-201ENST00000514909 LIG3P49916 1009 aa11.26□□□□□ -0.61
LDHBP3-201ENST00000514909 SFSWAPQ12872 951 aaKnown RBP11.26□□□□□ -0.61
LDHBP3-201ENST00000514909 HYAL2Q12891 473 aa11.26□□□□□ -0.61
LDHBP3-201ENST00000514909 ZKSCAN3Q9BRR0 538 aa11.26□□□□□ -0.61
LDHBP3-201ENST00000514909 GINM1Q9NU53 330 aa11.26□□□□□ -0.61
LDHBP3-201ENST00000514909 TLR7Q9NYK1 1049 aaKnown RBP11.26□□□□□ -0.61
LDHBP3-201ENST00000514909 SIRPGQ9P1W8 387 aa11.26□□□□□ -0.61
LDHBP3-201ENST00000514909 ZFATQ9P243 1243 aa11.26□□□□□ -0.61
LDHBP3-201ENST00000514909 EFR3BQ9Y2G0 817 aa11.26□□□□□ -0.61
LDHBP3-201ENST00000514909 PCDHGC4Q9Y5F7 938 aa11.26□□□□□ -0.61
LDHBP3-201ENST00000514909 FIGNL2A6NMB9 653 aa11.25□□□□□ -0.61
LDHBP3-201ENST00000514909 K7ELQ4 463 aaPredicted RBP11.25□□□□□ -0.61
LDHBP3-201ENST00000514909 PSAPP07602 524 aa11.25□□□□□ -0.61
LDHBP3-201ENST00000514909 LMNB2Q03252 620 aa11.25□□□□□ -0.61
LDHBP3-201ENST00000514909 FBXL19Q6PCT2 694 aa11.25□□□□□ -0.61
LDHBP3-201ENST00000514909 ZNF662Q6ZS27 426 aa11.25□□□□□ -0.61
LDHBP3-201ENST00000514909 KRT25Q7Z3Z0 450 aa11.25□□□□□ -0.61
LDHBP3-201ENST00000514909 JAZF1Q86VZ6 243 aa11.25□□□□□ -0.61
LDHBP3-201ENST00000514909 BHLHE41Q9C0J9 482 aaPredicted RBP11.25□□□□□ -0.61
LDHBP3-201ENST00000514909 TERTO14746 1132 aaKnown RBP11.24□□□□□ -0.61
LDHBP3-201ENST00000514909 RPS26P62854 115 aaKnown RBP11.24□□□□□ -0.61
LDHBP3-201ENST00000514909 NCAPG2Q86XI2 1143 aa11.24□□□□□ -0.61
LDHBP3-201ENST00000514909 GAS2L1Q99501 681 aaPredicted RBP11.24□□□□□ -0.61
LDHBP3-201ENST00000514909 OSMRQ99650 979 aa11.24□□□□□ -0.61
LDHBP3-201ENST00000514909 SENP2Q9HC62 589 aa11.24□□□□□ -0.61
LDHBP3-201ENST00000514909 PLAURQ03405 335 aa11.23□□□□□ -0.61
LDHBP3-201ENST00000514909 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.23□□□□□ -0.61
LDHBP3-201ENST00000514909 RPS26P11Q5JNZ5 115 aaPredicted RBP11.23□□□□□ -0.61
LDHBP3-201ENST00000514909 CEP120Q8N960 986 aa11.23□□□□□ -0.61
LDHBP3-201ENST00000514909 PNMA5Q96PV4 448 aa11.23□□□□□ -0.61
LDHBP3-201ENST00000514909 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.23□□□□□ -0.61
LDHBP3-201ENST00000514909 KLF4O43474 513 aa11.22□□□□□ -0.61
LDHBP3-201ENST00000514909 TNP2Q05952 138 aa11.22□□□□□ -0.61
LDHBP3-201ENST00000514909 UBAP2LQ14157 1087 aaKnown RBP11.22□□□□□ -0.61
LDHBP3-201ENST00000514909 TPTE2Q6XPS3 522 aa11.22□□□□□ -0.61
LDHBP3-201ENST00000514909 AGMOQ6ZNB7 445 aa11.22□□□□□ -0.61
LDHBP3-201ENST00000514909 TRIM46Q7Z4K8 759 aa11.22□□□□□ -0.61
LDHBP3-201ENST00000514909 NECAB3Q96P71 396 aaPredicted RBP11.22□□□□□ -0.61
LDHBP3-201ENST00000514909 DZANK1Q9NVP4 752 aa11.22□□□□□ -0.61
LDHBP3-201ENST00000514909 DNMT3LQ9UJW3 386 aa11.22□□□□□ -0.61
LDHBP3-201ENST00000514909 SBNO2Q9Y2G9 1366 aa11.22□□□□□ -0.61
LDHBP3-201ENST00000514909 ROBO2Q9HCK4 1378 aa11.21□□□□□ -0.61
LDHBP3-201ENST00000514909 SENP3-EIF4A1A0A087X0R7 540 aa11.21□□□□□ -0.61
LDHBP3-201ENST00000514909 F6X3S4 739 aa11.21□□□□□ -0.61
LDHBP3-201ENST00000514909 FBXO24O75426 580 aa11.21□□□□□ -0.61
LDHBP3-201ENST00000514909 THBS1P07996 1170 aa11.21□□□□□ -0.61
LDHBP3-201ENST00000514909 CELA3AP09093 270 aa11.21□□□□□ -0.61
LDHBP3-201ENST00000514909 NFKB1P19838 968 aa11.21□□□□□ -0.61
LDHBP3-201ENST00000514909 HSD3B2P26439 372 aa11.21□□□□□ -0.61
LDHBP3-201ENST00000514909 CAMK2GQ13555 558 aaPredicted RBP11.21□□□□□ -0.61
LDHBP3-201ENST00000514909 COL13A1Q5TAT6 717 aaPredicted RBP11.21□□□□□ -0.61
LDHBP3-201ENST00000514909 PCNX4Q63HM2 1172 aa11.21□□□□□ -0.61
LDHBP3-201ENST00000514909 LRP10Q7Z4F1 713 aa11.21□□□□□ -0.61
LDHBP3-201ENST00000514909 TMEM102Q8N9M5 508 aaPredicted RBP11.21□□□□□ -0.61
LDHBP3-201ENST00000514909 ENC1O14682 589 aa11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 PF4P02776 101 aa11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 ETFBP38117 255 aa11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 GRIA4P48058 902 aa11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 NRLP54845 237 aa11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 RAB33AQ14088 237 aa11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 MAP3K11Q16584 847 aa11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 SNAP47Q5SQN1 464 aa11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 ANKS3Q6ZW76 656 aa11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 CCDC84Q86UT8 332 aaPredicted RBP11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 SLITRK4Q8IW52 837 aa11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 LRRC3Q9BY71 257 aa11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 NDFIP2Q9NV92 336 aa11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 PRKAG3Q9UGI9 489 aa11.2□□□□□ -0.62
LDHBP3-201ENST00000514909 KHNYNO15037 678 aaKnown RBP11.19□□□□□ -0.62
LDHBP3-201ENST00000514909 MAPTP10636 758 aaKnown RBP11.19□□□□□ -0.62
LDHBP3-201ENST00000514909 BMP1P13497 986 aa11.19□□□□□ -0.62
LDHBP3-201ENST00000514909 SPEM2Q0P670 501 aa11.19□□□□□ -0.62
LDHBP3-201ENST00000514909 FAM196AQ6ZSG2 479 aa11.19□□□□□ -0.62
LDHBP3-201ENST00000514909 MARK1Q9P0L2 795 aa11.19□□□□□ -0.62
LDHBP3-201ENST00000514909 STK17AQ9UEE5 414 aa11.19□□□□□ -0.62
LDHBP3-201ENST00000514909 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.19□□□□□ -0.62
LDHBP3-201ENST00000514909 TLR6Q9Y2C9 796 aa11.19□□□□□ -0.62
LDHBP3-201ENST00000514909 DCDC2BA2VCK2 349 aa11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 NFKBIEO00221 500 aa11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 ENPP3O14638 875 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms