RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 CCDC57Q2TAC2 916 aa17.52■□□□□ 0.4
ITGA3-214ENST00000514834 GMLQ99445 158 aa17.52■□□□□ 0.4
ITGA3-214ENST00000514834 ANKRD2Q9GZV1 360 aa17.52■□□□□ 0.4
ITGA3-214ENST00000514834 ASTN2O75129 1339 aaPredicted RBP17.51■□□□□ 0.39
ITGA3-214ENST00000514834 PLIN1O60240 522 aa17.51■□□□□ 0.39
ITGA3-214ENST00000514834 CT47B1P0C2W7 299 aaPredicted RBP17.51■□□□□ 0.39
ITGA3-214ENST00000514834 RPS12P25398 132 aaKnown RBP17.51■□□□□ 0.39
ITGA3-214ENST00000514834 CST9Q5W186 159 aa17.51■□□□□ 0.39
ITGA3-214ENST00000514834 RSBN1LQ6PCB5 846 aaPredicted RBP17.51■□□□□ 0.39
ITGA3-214ENST00000514834 LDHAL6AQ6ZMR3 332 aa17.51■□□□□ 0.39
ITGA3-214ENST00000514834 PODNQ7Z5L7 613 aa17.51■□□□□ 0.39
ITGA3-214ENST00000514834 ZBED9Q6R2W3 1325 aa17.5■□□□□ 0.39
ITGA3-214ENST00000514834 USP17L3A6NCW0 530 aa17.5■□□□□ 0.39
ITGA3-214ENST00000514834 USP17L4A6NCW7 530 aa17.5■□□□□ 0.39
ITGA3-214ENST00000514834 RABL6Q3YEC7 729 aaPredicted RBP17.5■□□□□ 0.39
ITGA3-214ENST00000514834 USP17L1Q7RTZ2 530 aa17.5■□□□□ 0.39
ITGA3-214ENST00000514834 TRPM7Q96QT4 1865 aa17.5■□□□□ 0.39
ITGA3-214ENST00000514834 BRPF1P55201 1214 aaPredicted RBP17.49■□□□□ 0.39
ITGA3-214ENST00000514834 TAF7LQ5H9L4 462 aa17.49■□□□□ 0.39
ITGA3-214ENST00000514834 DACT2Q5SW24 774 aa17.49■□□□□ 0.39
ITGA3-214ENST00000514834 KLHDC4Q8TBB5 520 aa17.49■□□□□ 0.39
ITGA3-214ENST00000514834 COA1Q9GZY4 146 aa17.49■□□□□ 0.39
ITGA3-214ENST00000514834 CNNM1Q9NRU3 951 aa17.49■□□□□ 0.39
ITGA3-214ENST00000514834 TNNQ9UQP3 1299 aa17.49■□□□□ 0.39
ITGA3-214ENST00000514834 BCAR3O75815 825 aa17.48■□□□□ 0.39
ITGA3-214ENST00000514834 KCNJ4P48050 445 aa17.48■□□□□ 0.39
ITGA3-214ENST00000514834 ZNF280AP59817 542 aaPredicted RBP17.48■□□□□ 0.39
ITGA3-214ENST00000514834 USP48Q86UV5 1035 aa17.48■□□□□ 0.39
ITGA3-214ENST00000514834 AGBL3Q8NEM8 1001 aa17.48■□□□□ 0.39
ITGA3-214ENST00000514834 ZC3H15Q8WU90 426 aaKnown RBP17.48■□□□□ 0.39
ITGA3-214ENST00000514834 FBXW7Q969H0 707 aa17.48■□□□□ 0.39
ITGA3-214ENST00000514834 CNTNAP1P78357 1384 aa17.48■□□□□ 0.39
ITGA3-214ENST00000514834 VEGFBP49765 207 aa17.47■□□□□ 0.39
ITGA3-214ENST00000514834 KIF4BQ2VIQ3 1234 aa17.47■□□□□ 0.39
ITGA3-214ENST00000514834 LRRC24Q50LG9 513 aa17.47■□□□□ 0.39
ITGA3-214ENST00000514834 RIPOR2Q9Y4F9 1068 aa17.47■□□□□ 0.39
ITGA3-214ENST00000514834 ZNF609O15014 1411 aa17.47■□□□□ 0.39
ITGA3-214ENST00000514834 C15orf52Q6ZUT6 534 aaKnown RBP17.46■□□□□ 0.39
ITGA3-214ENST00000514834 CD209Q9NNX6 404 aa17.46■□□□□ 0.39
ITGA3-214ENST00000514834 ADM5C9JUS6 153 aa17.45■□□□□ 0.38
ITGA3-214ENST00000514834 USP17L8P0C7I0 530 aa17.45■□□□□ 0.38
ITGA3-214ENST00000514834 GTF2IP78347 998 aa17.45■□□□□ 0.38
ITGA3-214ENST00000514834 STRIP1Q5VSL9 837 aa17.45■□□□□ 0.38
ITGA3-214ENST00000514834 TTLL5Q6EMB2 1281 aa17.45■□□□□ 0.38
ITGA3-214ENST00000514834 CDC37L1Q7L3B6 337 aa17.45■□□□□ 0.38
ITGA3-214ENST00000514834 API5Q9BZZ5 524 aaKnown RBP17.45■□□□□ 0.38
ITGA3-214ENST00000514834 ABT1Q9ULW3 272 aaKnown RBP17.45■□□□□ 0.38
ITGA3-214ENST00000514834 SCAF8Q9UPN6 1271 aaKnown RBP17.45■□□□□ 0.38
ITGA3-214ENST00000514834 RASSF10A6NK89 507 aa17.44■□□□□ 0.38
ITGA3-214ENST00000514834 CELF2O95319 508 aaKnown RBP17.44■□□□□ 0.38
ITGA3-214ENST00000514834 RFX5P48382 616 aaPredicted RBP17.44■□□□□ 0.38
ITGA3-214ENST00000514834 SCARF1Q14162 830 aa17.44■□□□□ 0.38
ITGA3-214ENST00000514834 DEFB115Q30KQ5 88 aa17.44■□□□□ 0.38
ITGA3-214ENST00000514834 CERS5Q8N5B7 392 aa17.44■□□□□ 0.38
ITGA3-214ENST00000514834 ZNF408Q9H9D4 720 aa17.44■□□□□ 0.38
ITGA3-214ENST00000514834 MYOZ2Q9NPC6 264 aa17.44■□□□□ 0.38
ITGA3-214ENST00000514834 JAG2Q9Y219 1238 aa17.44■□□□□ 0.38
ITGA3-214ENST00000514834 KRT26Q7Z3Y9 468 aa17.43■□□□□ 0.38
ITGA3-214ENST00000514834 MEIS3Q99687 375 aa17.43■□□□□ 0.38
ITGA3-214ENST00000514834 GGA3Q9NZ52 723 aa17.43■□□□□ 0.38
ITGA3-214ENST00000514834 HSPA1AP0DMV8 641 aaKnown RBP17.42■□□□□ 0.38
ITGA3-214ENST00000514834 HSPA1BP0DMV9 641 aaKnown RBP17.42■□□□□ 0.38
ITGA3-214ENST00000514834 IL1R1P14778 569 aa17.42■□□□□ 0.38
ITGA3-214ENST00000514834 GYG1P46976 350 aa17.42■□□□□ 0.38
ITGA3-214ENST00000514834 NBPF9Q3BBW0 867 aa17.42■□□□□ 0.38
ITGA3-214ENST00000514834 ANGEL2Q5VTE6 544 aaKnown RBP17.42■□□□□ 0.38
ITGA3-214ENST00000514834 FRAT1Q92837 279 aaPredicted RBP17.42■□□□□ 0.38
ITGA3-214ENST00000514834 LRRFIP2Q9Y608 721 aaKnown RBP17.42■□□□□ 0.38
ITGA3-214ENST00000514834 UBTFL1P0CB47 393 aaPredicted RBP17.41■□□□□ 0.38
ITGA3-214ENST00000514834 TRIM27P14373 513 aa17.41■□□□□ 0.38
ITGA3-214ENST00000514834 UBE4AQ14139 1066 aa17.41■□□□□ 0.38
ITGA3-214ENST00000514834 INTS3Q68E01 1043 aaKnown RBP17.41■□□□□ 0.38
ITGA3-214ENST00000514834 KIAA0825Q8IV33 1275 aa17.41■□□□□ 0.38
ITGA3-214ENST00000514834 VGLL2Q8N8G2 317 aa17.41■□□□□ 0.38
ITGA3-214ENST00000514834 ARHGAP45Q92619 1136 aa17.41■□□□□ 0.38
ITGA3-214ENST00000514834 DCPSQ96C86 337 aaKnown RBP17.41■□□□□ 0.38
ITGA3-214ENST00000514834 FAM84BQ96KN1 310 aaPredicted RBP17.41■□□□□ 0.38
ITGA3-214ENST00000514834 TLL2Q9Y6L7 1015 aa17.41■□□□□ 0.38
ITGA3-214ENST00000514834 KIF16BQ96L93 1317 aa17.41■□□□□ 0.38
ITGA3-214ENST00000514834 PTPN12Q05209 780 aaKnown RBP17.4■□□□□ 0.38
ITGA3-214ENST00000514834 METTL24Q5JXM2 366 aa17.4■□□□□ 0.38
ITGA3-214ENST00000514834 CYP4F22Q6NT55 531 aa17.4■□□□□ 0.38
ITGA3-214ENST00000514834 ZNF804AQ7Z570 1209 aa17.4■□□□□ 0.38
ITGA3-214ENST00000514834 SAPCD2Q86UD0 394 aa17.4■□□□□ 0.38
ITGA3-214ENST00000514834 CLUAP1Q96AJ1 413 aa17.4■□□□□ 0.38
ITGA3-214ENST00000514834 PCDHAC2Q9Y5I4 1007 aa17.4■□□□□ 0.38
ITGA3-214ENST00000514834 MROH5Q6ZUA9 1318 aa17.4■□□□□ 0.38
ITGA3-214ENST00000514834 SASH1O94885 1247 aa17.39■□□□□ 0.37
ITGA3-214ENST00000514834 GRM1Q13255 1194 aa17.39■□□□□ 0.37
ITGA3-214ENST00000514834 ATG9AQ7Z3C6 839 aa17.39■□□□□ 0.37
ITGA3-214ENST00000514834 WDR33Q9C0J8 1336 aaKnown RBP17.39■□□□□ 0.37
ITGA3-214ENST00000514834 WNT10BO00744 389 aa17.38■□□□□ 0.37
ITGA3-214ENST00000514834 PDE8BO95263 885 aa17.38■□□□□ 0.37
ITGA3-214ENST00000514834 PRAMEF18Q5VWM3 479 aa17.38■□□□□ 0.37
ITGA3-214ENST00000514834 ATF7IPQ6VMQ6 1270 aa17.38■□□□□ 0.37
ITGA3-214ENST00000514834 TDRD7Q8NHU6 1098 aaKnown RBP17.38■□□□□ 0.37
ITGA3-214ENST00000514834 CAPNS2Q96L46 248 aa17.38■□□□□ 0.37
ITGA3-214ENST00000514834 IQSEC3Q9UPP2 1182 aaPredicted RBP17.38■□□□□ 0.37
ITGA3-214ENST00000514834 MYO3BQ8WXR4 1341 aa17.38■□□□□ 0.37
ITGA3-214ENST00000514834 F8W031 263 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms