RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 IQCA1LA6NCM1 817 aa10.33□□□□□ -0.76
CCL28-204ENST00000514421 YDJCA8MPS7 323 aa10.33□□□□□ -0.76
CCL28-204ENST00000514421 SRGAP3O43295 1099 aa10.33□□□□□ -0.76
CCL28-204ENST00000514421 ECE2O60344 883 aa10.33□□□□□ -0.76
CCL28-204ENST00000514421 RAD17O75943 681 aa10.33□□□□□ -0.76
CCL28-204ENST00000514421 METTL24Q5JXM2 366 aa10.33□□□□□ -0.76
CCL28-204ENST00000514421 CENPQQ7L2Z9 268 aaPredicted RBP10.33□□□□□ -0.76
CCL28-204ENST00000514421 C16orf71Q8IYS4 520 aaPredicted RBP10.33□□□□□ -0.76
CCL28-204ENST00000514421 COA1Q9GZY4 146 aa10.33□□□□□ -0.76
CCL28-204ENST00000514421 DDX19BQ9UMR2 479 aa10.33□□□□□ -0.76
CCL28-204ENST00000514421 COG6Q9Y2V7 657 aa10.33□□□□□ -0.76
CCL28-204ENST00000514421 TAF1P21675 1872 aa10.33□□□□□ -0.76
CCL28-204ENST00000514421 LAMB2P55268 1798 aa10.32□□□□□ -0.76
CCL28-204ENST00000514421 SNAP23O00161 211 aa10.32□□□□□ -0.76
CCL28-204ENST00000514421 CIAO1O76071 339 aa10.32□□□□□ -0.76
CCL28-204ENST00000514421 TOMM70O94826 608 aa10.32□□□□□ -0.76
CCL28-204ENST00000514421 PDE8BO95263 885 aa10.32□□□□□ -0.76
CCL28-204ENST00000514421 IL15P40933 162 aaPredicted RBP10.32□□□□□ -0.76
CCL28-204ENST00000514421 MVPQ14764 893 aaKnown RBP10.32□□□□□ -0.76
CCL28-204ENST00000514421 TXNRD3Q86VQ6 643 aa10.32□□□□□ -0.76
CCL28-204ENST00000514421 KCNQ5Q9NR82 932 aa10.32□□□□□ -0.76
CCL28-204ENST00000514421 CEP126Q9P2H0 1117 aa10.32□□□□□ -0.76
CCL28-204ENST00000514421 HACL1Q9UJ83 578 aa10.32□□□□□ -0.76
CCL28-204ENST00000514421 MED23Q9ULK4 1368 aa10.31□□□□□ -0.76
CCL28-204ENST00000514421 PSMD14O00487 310 aa10.31□□□□□ -0.76
CCL28-204ENST00000514421 VIL1P09327 827 aaKnown RBP10.31□□□□□ -0.76
CCL28-204ENST00000514421 LMOD1P29536 600 aaPredicted RBP10.31□□□□□ -0.76
CCL28-204ENST00000514421 ATG9AQ7Z3C6 839 aa10.31□□□□□ -0.76
CCL28-204ENST00000514421 DPF2Q92785 391 aa10.31□□□□□ -0.76
CCL28-204ENST00000514421 SIL1Q9H173 461 aa10.31□□□□□ -0.76
CCL28-204ENST00000514421 TAF1DQ9H5J8 278 aaPredicted RBP10.31□□□□□ -0.76
CCL28-204ENST00000514421 CD209Q9NNX6 404 aa10.31□□□□□ -0.76
CCL28-204ENST00000514421 PA2G4Q9UQ80 394 aaKnown RBP10.31□□□□□ -0.76
CCL28-204ENST00000514421 COL4A1P02462 1669 aa10.31□□□□□ -0.76
CCL28-204ENST00000514421 PNMA6EA0A0J9YXQ4 647 aa10.3□□□□□ -0.76
CCL28-204ENST00000514421 USP17L3A6NCW0 530 aa10.3□□□□□ -0.76
CCL28-204ENST00000514421 USP17L4A6NCW7 530 aa10.3□□□□□ -0.76
CCL28-204ENST00000514421 H7C1D1 291 aa10.3□□□□□ -0.76
CCL28-204ENST00000514421 RPS12P25398 132 aaKnown RBP10.3□□□□□ -0.76
CCL28-204ENST00000514421 HIBADHP31937 336 aaKnown RBP10.3□□□□□ -0.76
CCL28-204ENST00000514421 EPS15P42566 896 aa10.3□□□□□ -0.76
CCL28-204ENST00000514421 GMPSP49915 693 aaPredicted RBP10.3□□□□□ -0.76
CCL28-204ENST00000514421 G3BP1Q13283 466 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCL28-204ENST00000514421 POLA2Q14181 598 aa10.3□□□□□ -0.76
CCL28-204ENST00000514421 USP17L1Q7RTZ2 530 aa10.3□□□□□ -0.76
CCL28-204ENST00000514421 PNMA8AQ86V59 439 aaPredicted RBP10.3□□□□□ -0.76
CCL28-204ENST00000514421 RPAP2Q8IXW5 612 aaPredicted RBP10.3□□□□□ -0.76
CCL28-204ENST00000514421 RBM46Q8TBY0 533 aaKnown RBP10.3□□□□□ -0.76
CCL28-204ENST00000514421 SSH3Q8TE77 659 aa10.3□□□□□ -0.76
CCL28-204ENST00000514421 FAM84BQ96KN1 310 aaPredicted RBP10.3□□□□□ -0.76
CCL28-204ENST00000514421 C1orf115Q9H7X2 142 aa10.3□□□□□ -0.76
CCL28-204ENST00000514421 ZBTB40Q9NUA8 1239 aa10.3□□□□□ -0.76
CCL28-204ENST00000514421 CACNA1SQ13698 1873 aa10.3□□□□□ -0.76
CCL28-204ENST00000514421 IFIT1P09914 478 aaKnown RBP10.29□□□□□ -0.76
CCL28-204ENST00000514421 FGFR2P21802 821 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 KLRK1P26718 216 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 EPHX2P34913 555 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 SCNN1DP51172 638 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 C1QTNF8P60827 252 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 PUM3Q15397 648 aaKnown RBP10.29□□□□□ -0.76
CCL28-204ENST00000514421 CAVIN4Q5BKX8 364 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 STRIP1Q5VSL9 837 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 TTLL5Q6EMB2 1281 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 RSBN1LQ6PCB5 846 aaPredicted RBP10.29□□□□□ -0.76
CCL28-204ENST00000514421 ZNF804AQ7Z570 1209 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 FBXO33Q7Z6M2 555 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 VGLL2Q8N8G2 317 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 AGBL3Q8NEM8 1001 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 LPIN2Q92539 896 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 GPRC5DQ9NZD1 345 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 CNOT7Q9UIV1 285 aaKnown RBP10.29□□□□□ -0.76
CCL28-204ENST00000514421 ZBTB12Q9Y330 459 aaPredicted RBP10.29□□□□□ -0.76
CCL28-204ENST00000514421 CCDC88AQ3V6T2 1871 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 IRS2Q9Y4H2 1338 aa10.29□□□□□ -0.76
CCL28-204ENST00000514421 SURF6O75683 361 aaKnown RBP10.28□□□□□ -0.76
CCL28-204ENST00000514421 SASH1O94885 1247 aa10.28□□□□□ -0.76
CCL28-204ENST00000514421 IL1R1P14778 569 aa10.28□□□□□ -0.76
CCL28-204ENST00000514421 GYG1P46976 350 aa10.28□□□□□ -0.76
CCL28-204ENST00000514421 GTF2IP78347 998 aa10.28□□□□□ -0.76
CCL28-204ENST00000514421 CEP85Q6P2H3 762 aa10.28□□□□□ -0.76
CCL28-204ENST00000514421 USP50Q70EL3 339 aaPredicted RBP10.28□□□□□ -0.76
CCL28-204ENST00000514421 VPS37DQ86XT2 251 aa10.28□□□□□ -0.76
CCL28-204ENST00000514421 AKAP2Q9Y2D5 859 aa10.28□□□□□ -0.76
CCL28-204ENST00000514421 NOP58Q9Y2X3 529 aaKnown RBP10.28□□□□□ -0.76
CCL28-204ENST00000514421 RBM19Q9Y4C8 960 aaKnown RBP10.28□□□□□ -0.76
CCL28-204ENST00000514421 MYH3P11055 1940 aa10.28□□□□□ -0.76
CCL28-204ENST00000514421 COL4A5P29400 1685 aa10.28□□□□□ -0.76
CCL28-204ENST00000514421 DICER1Q9UPY3 1922 aaKnown RBP10.27□□□□□ -0.76
CCL28-204ENST00000514421 SLC5A1P13866 664 aa10.27□□□□□ -0.77
CCL28-204ENST00000514421 MMP14P50281 582 aa10.27□□□□□ -0.77
CCL28-204ENST00000514421 BCAMP50895 628 aa10.27□□□□□ -0.77
CCL28-204ENST00000514421 FSTL1Q12841 308 aa10.27□□□□□ -0.77
CCL28-204ENST00000514421 EAPPQ56P03 285 aaPredicted RBP10.27□□□□□ -0.77
CCL28-204ENST00000514421 DACT2Q5SW24 774 aa10.27□□□□□ -0.77
CCL28-204ENST00000514421 SMC1BQ8NDV3 1235 aa10.27□□□□□ -0.77
CCL28-204ENST00000514421 TDRD7Q8NHU6 1098 aaKnown RBP10.27□□□□□ -0.77
CCL28-204ENST00000514421 GMLQ99445 158 aa10.27□□□□□ -0.77
CCL28-204ENST00000514421 ADARB2Q9NS39 739 aaKnown RBP10.27□□□□□ -0.77
CCL28-204ENST00000514421 CLEC11AQ9Y240 323 aa10.27□□□□□ -0.77
CCL28-204ENST00000514421 DUOX1Q9NRD9 1551 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms