RNA–Protein interactions for RNA: ENST00000514308.3

PDLIM3-210, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-210ENST00000514308 ABT1Q9ULW3 272 aaKnown RBP16.61■□□□□ 0.25
PDLIM3-210ENST00000514308 CNTNAP1P78357 1384 aa16.61■□□□□ 0.25
PDLIM3-210ENST00000514308 ZNF609O15014 1411 aa16.61■□□□□ 0.25
PDLIM3-210ENST00000514308 TAF5LO75529 589 aa16.6■□□□□ 0.25
PDLIM3-210ENST00000514308 USP17L8P0C7I0 530 aa16.6■□□□□ 0.25
PDLIM3-210ENST00000514308 BRPF1P55201 1214 aaPredicted RBP16.6■□□□□ 0.25
PDLIM3-210ENST00000514308 TXNRD3Q86VQ6 643 aa16.6■□□□□ 0.25
PDLIM3-210ENST00000514308 HELBQ8NG08 1087 aaPredicted RBP16.6■□□□□ 0.25
PDLIM3-210ENST00000514308 KAZALD1Q96I82 304 aa16.6■□□□□ 0.25
PDLIM3-210ENST00000514308 GLIS2Q9BZE0 524 aaPredicted RBP16.6■□□□□ 0.25
PDLIM3-210ENST00000514308 API5Q9BZZ5 524 aaKnown RBP16.6■□□□□ 0.25
PDLIM3-210ENST00000514308 BICC1Q9H694 974 aaKnown RBP16.6■□□□□ 0.25
PDLIM3-210ENST00000514308 NOB1Q9ULX3 412 aaKnown RBP16.6■□□□□ 0.25
PDLIM3-210ENST00000514308 KIF4BQ2VIQ3 1234 aa16.59■□□□□ 0.25
PDLIM3-210ENST00000514308 RABL6Q3YEC7 729 aaPredicted RBP16.59■□□□□ 0.25
PDLIM3-210ENST00000514308 STRIP1Q5VSL9 837 aa16.59■□□□□ 0.25
PDLIM3-210ENST00000514308 FBXW7Q969H0 707 aa16.59■□□□□ 0.25
PDLIM3-210ENST00000514308 USP44Q9H0E7 712 aa16.59■□□□□ 0.25
PDLIM3-210ENST00000514308 MYO3BQ8WXR4 1341 aa16.59■□□□□ 0.25
PDLIM3-210ENST00000514308 RASSF10A6NK89 507 aa16.58■□□□□ 0.24
PDLIM3-210ENST00000514308 EGFRP00533 1210 aa16.58■□□□□ 0.24
PDLIM3-210ENST00000514308 KLRK1P26718 216 aa16.58■□□□□ 0.24
PDLIM3-210ENST00000514308 RARSP54136 660 aaKnown RBP16.58■□□□□ 0.24
PDLIM3-210ENST00000514308 ZNF280AP59817 542 aaPredicted RBP16.58■□□□□ 0.24
PDLIM3-210ENST00000514308 FMR1Q06787 632 aaKnown RBP eCLIP16.58■□□□□ 0.24
PDLIM3-210ENST00000514308 DEFB115Q30KQ5 88 aa16.58■□□□□ 0.24
PDLIM3-210ENST00000514308 DACT2Q5SW24 774 aa16.58■□□□□ 0.24
PDLIM3-210ENST00000514308 OGFOD1Q8N543 542 aa16.58■□□□□ 0.24
PDLIM3-210ENST00000514308 DCPSQ96C86 337 aaKnown RBP16.58■□□□□ 0.24
PDLIM3-210ENST00000514308 GMLQ99445 158 aa16.58■□□□□ 0.24
PDLIM3-210ENST00000514308 KIF16BQ96L93 1317 aa16.58■□□□□ 0.24
PDLIM3-210ENST00000514308 SPEF2Q9C093 1822 aa16.58■□□□□ 0.24
PDLIM3-210ENST00000514308 PLIN1O60240 522 aa16.57■□□□□ 0.24
PDLIM3-210ENST00000514308 CST9Q5W186 159 aa16.57■□□□□ 0.24
PDLIM3-210ENST00000514308 C15orf52Q6ZUT6 534 aaKnown RBP16.57■□□□□ 0.24
PDLIM3-210ENST00000514308 KRT26Q7Z3Y9 468 aa16.57■□□□□ 0.24
PDLIM3-210ENST00000514308 ZNF804AQ7Z570 1209 aa16.57■□□□□ 0.24
PDLIM3-210ENST00000514308 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
PDLIM3-210ENST00000514308 SNAP23O00161 211 aa16.56■□□□□ 0.24
PDLIM3-210ENST00000514308 CELF2O95319 508 aaKnown RBP16.56■□□□□ 0.24
PDLIM3-210ENST00000514308 TTLL5Q6EMB2 1281 aa16.56■□□□□ 0.24
PDLIM3-210ENST00000514308 USP48Q86UV5 1035 aa16.56■□□□□ 0.24
PDLIM3-210ENST00000514308 ANKRD44Q8N8A2 993 aa16.56■□□□□ 0.24
PDLIM3-210ENST00000514308 CD209Q9NNX6 404 aa16.56■□□□□ 0.24
PDLIM3-210ENST00000514308 MYOZ2Q9NPC6 264 aa16.56■□□□□ 0.24
PDLIM3-210ENST00000514308 HDAC5Q9UQL6 1122 aa16.56■□□□□ 0.24
PDLIM3-210ENST00000514308 PCNTO95613 3336 aa16.56■□□□□ 0.24
PDLIM3-210ENST00000514308 MROH5Q6ZUA9 1318 aa16.55■□□□□ 0.24
PDLIM3-210ENST00000514308 UBTFL1P0CB47 393 aaPredicted RBP16.55■□□□□ 0.24
PDLIM3-210ENST00000514308 VEGFBP49765 207 aa16.55■□□□□ 0.24
PDLIM3-210ENST00000514308 MMP14P50281 582 aa16.55■□□□□ 0.24
PDLIM3-210ENST00000514308 GTF2IP78347 998 aa16.55■□□□□ 0.24
PDLIM3-210ENST00000514308 SULF1Q8IWU6 871 aa16.55■□□□□ 0.24
PDLIM3-210ENST00000514308 ARHGAP45Q92619 1136 aa16.55■□□□□ 0.24
PDLIM3-210ENST00000514308 ZNF408Q9H9D4 720 aa16.55■□□□□ 0.24
PDLIM3-210ENST00000514308 GGA3Q9NZ52 723 aa16.55■□□□□ 0.24
PDLIM3-210ENST00000514308 IRS2Q9Y4H2 1338 aa16.54■□□□□ 0.24
PDLIM3-210ENST00000514308 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
PDLIM3-210ENST00000514308 UBE4AQ14139 1066 aa16.54■□□□□ 0.24
PDLIM3-210ENST00000514308 SCARF1Q14162 830 aa16.54■□□□□ 0.24
PDLIM3-210ENST00000514308 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
PDLIM3-210ENST00000514308 MXD3Q9BW11 206 aa16.54■□□□□ 0.24
PDLIM3-210ENST00000514308 PUS3Q9BZE2 481 aaKnown RBP16.54■□□□□ 0.24
PDLIM3-210ENST00000514308 TLL2Q9Y6L7 1015 aa16.54■□□□□ 0.24
PDLIM3-210ENST00000514308 HSPA1AP0DMV8 641 aaKnown RBP16.53■□□□□ 0.24
PDLIM3-210ENST00000514308 HSPA1BP0DMV9 641 aaKnown RBP16.53■□□□□ 0.24
PDLIM3-210ENST00000514308 ECE1P42892 770 aa16.53■□□□□ 0.24
PDLIM3-210ENST00000514308 HDAC9Q9UKV0 1011 aa16.53■□□□□ 0.24
PDLIM3-210ENST00000514308 RIPOR2Q9Y4F9 1068 aa16.53■□□□□ 0.24
PDLIM3-210ENST00000514308 IL1R1P14778 569 aa16.52■□□□□ 0.24
PDLIM3-210ENST00000514308 METTL24Q5JXM2 366 aa16.52■□□□□ 0.24
PDLIM3-210ENST00000514308 ANGEL2Q5VTE6 544 aaKnown RBP16.52■□□□□ 0.24
PDLIM3-210ENST00000514308 SAPCD2Q86UD0 394 aa16.52■□□□□ 0.24
PDLIM3-210ENST00000514308 WDR33Q9C0J8 1336 aaKnown RBP16.51■□□□□ 0.23
PDLIM3-210ENST00000514308 ADM5C9JUS6 153 aa16.51■□□□□ 0.23
PDLIM3-210ENST00000514308 KIAA0825Q8IV33 1275 aa16.51■□□□□ 0.23
PDLIM3-210ENST00000514308 CAPNS2Q96L46 248 aa16.51■□□□□ 0.23
PDLIM3-210ENST00000514308 ASTN2O75129 1339 aaPredicted RBP16.5■□□□□ 0.23
PDLIM3-210ENST00000514308 PITPNM2Q9BZ72 1349 aa16.5■□□□□ 0.23
PDLIM3-210ENST00000514308 PSME4Q14997 1843 aa16.5■□□□□ 0.23
PDLIM3-210ENST00000514308 SASH1O94885 1247 aa16.5■□□□□ 0.23
PDLIM3-210ENST00000514308 HIBADHP31937 336 aaKnown RBP16.5■□□□□ 0.23
PDLIM3-210ENST00000514308 GRM1Q13255 1194 aa16.5■□□□□ 0.23
PDLIM3-210ENST00000514308 LRRC24Q50LG9 513 aa16.5■□□□□ 0.23
PDLIM3-210ENST00000514308 INTS3Q68E01 1043 aaKnown RBP16.5■□□□□ 0.23
PDLIM3-210ENST00000514308 KLHDC4Q8TBB5 520 aa16.5■□□□□ 0.23
PDLIM3-210ENST00000514308 FRAT1Q92837 279 aaPredicted RBP16.5■□□□□ 0.23
PDLIM3-210ENST00000514308 HHIPL1Q96JK4 782 aa16.5■□□□□ 0.23
PDLIM3-210ENST00000514308 PDE8BO95263 885 aa16.49■□□□□ 0.23
PDLIM3-210ENST00000514308 GYG1P46976 350 aa16.49■□□□□ 0.23
PDLIM3-210ENST00000514308 NBPF9Q3BBW0 867 aa16.49■□□□□ 0.23
PDLIM3-210ENST00000514308 CYP4F22Q6NT55 531 aa16.49■□□□□ 0.23
PDLIM3-210ENST00000514308 DLK2Q6UY11 383 aa16.49■□□□□ 0.23
PDLIM3-210ENST00000514308 ATF7IPQ6VMQ6 1270 aa16.49■□□□□ 0.23
PDLIM3-210ENST00000514308 VPS37DQ86XT2 251 aa16.49■□□□□ 0.23
PDLIM3-210ENST00000514308 C2orf69Q8N8R5 385 aa16.49■□□□□ 0.23
PDLIM3-210ENST00000514308 AIDAQ96BJ3 306 aa16.49■□□□□ 0.23
PDLIM3-210ENST00000514308 EYA2O00167 538 aa16.48■□□□□ 0.23
PDLIM3-210ENST00000514308 WNT10BO00744 389 aa16.48■□□□□ 0.23
PDLIM3-210ENST00000514308 BCAR3O75815 825 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms