RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 KCNV2Q8TDN2 545 aa10.24□□□□□ -0.77
NEDD4-210ENST00000513957 ZC3H12CQ9C0D7 883 aaKnown RBP10.24□□□□□ -0.77
NEDD4-210ENST00000513957 CHMP4BQ9H444 224 aaKnown RBP10.24□□□□□ -0.77
NEDD4-210ENST00000513957 POLLQ9UGP5 575 aa10.24□□□□□ -0.77
NEDD4-210ENST00000513957 MROH5Q6ZUA9 1318 aa10.24□□□□□ -0.77
NEDD4-210ENST00000513957 KIF3CO14782 793 aa10.23□□□□□ -0.77
NEDD4-210ENST00000513957 TOMM70O94826 608 aa10.23□□□□□ -0.77
NEDD4-210ENST00000513957 MTX1Q13505 466 aa10.23□□□□□ -0.77
NEDD4-210ENST00000513957 TNIP1Q15025 636 aa10.23□□□□□ -0.77
NEDD4-210ENST00000513957 C15orf52Q6ZUT6 534 aaKnown RBP10.23□□□□□ -0.77
NEDD4-210ENST00000513957 ANKRD44Q8N8A2 993 aa10.23□□□□□ -0.77
NEDD4-210ENST00000513957 ZC3H15Q8WU90 426 aaKnown RBP10.23□□□□□ -0.77
NEDD4-210ENST00000513957 ZMYND15Q9H091 742 aa10.23□□□□□ -0.77
NEDD4-210ENST00000513957 ZNF541Q9H0D2 1346 aa10.23□□□□□ -0.77
NEDD4-210ENST00000513957 GNAI2P04899 355 aa10.22□□□□□ -0.77
NEDD4-210ENST00000513957 CHRNDQ07001 517 aa10.22□□□□□ -0.77
NEDD4-210ENST00000513957 CIAPIN1Q6FI81 312 aa10.22□□□□□ -0.77
NEDD4-210ENST00000513957 PODNQ7Z5L7 613 aa10.22□□□□□ -0.77
NEDD4-210ENST00000513957 C16orf71Q8IYS4 520 aaPredicted RBP10.22□□□□□ -0.77
NEDD4-210ENST00000513957 RBM46Q8TBY0 533 aaKnown RBP10.22□□□□□ -0.77
NEDD4-210ENST00000513957 ZNF526Q8TF50 670 aaPredicted RBP10.22□□□□□ -0.77
NEDD4-210ENST00000513957 MEIS3Q99687 375 aa10.22□□□□□ -0.77
NEDD4-210ENST00000513957 CNNM1Q9NRU3 951 aa10.22□□□□□ -0.77
NEDD4-210ENST00000513957 ZNF804BA4D1E1 1349 aa10.22□□□□□ -0.77
NEDD4-210ENST00000513957 G3V3G9 751 aa10.21□□□□□ -0.77
NEDD4-210ENST00000513957 ECE2O60344 883 aa10.21□□□□□ -0.77
NEDD4-210ENST00000513957 CIAO1O76071 339 aa10.21□□□□□ -0.77
NEDD4-210ENST00000513957 DDNO94850 711 aaPredicted RBP10.21□□□□□ -0.77
NEDD4-210ENST00000513957 RPS12P25398 132 aaKnown RBP10.21□□□□□ -0.77
NEDD4-210ENST00000513957 LMOD1P29536 600 aaPredicted RBP10.21□□□□□ -0.77
NEDD4-210ENST00000513957 KCNJ4P48050 445 aa10.21□□□□□ -0.77
NEDD4-210ENST00000513957 MMP14P50281 582 aa10.21□□□□□ -0.77
NEDD4-210ENST00000513957 UBE4AQ14139 1066 aa10.21□□□□□ -0.77
NEDD4-210ENST00000513957 DCAF8Q5TAQ9 597 aa10.21□□□□□ -0.77
NEDD4-210ENST00000513957 SLC51AQ86UW1 340 aa10.21□□□□□ -0.77
NEDD4-210ENST00000513957 PNMA8AQ86V59 439 aaPredicted RBP10.21□□□□□ -0.77
NEDD4-210ENST00000513957 PIP4P2Q8N4L2 257 aa10.21□□□□□ -0.77
NEDD4-210ENST00000513957 TMEM57Q8N5G2 664 aa10.21□□□□□ -0.77
NEDD4-210ENST00000513957 CLUAP1Q96AJ1 413 aa10.21□□□□□ -0.77
NEDD4-210ENST00000513957 COA1Q9GZY4 146 aa10.21□□□□□ -0.77
NEDD4-210ENST00000513957 NMRK2Q9NPI5 230 aa10.21□□□□□ -0.77
NEDD4-210ENST00000513957 LRRFIP2Q9Y608 721 aaKnown RBP10.21□□□□□ -0.77
NEDD4-210ENST00000513957 ECM29Q5VYK3 1845 aa10.21□□□□□ -0.78
NEDD4-210ENST00000513957 CXCL9Q07325 125 aa10.2□□□□□ -0.78
NEDD4-210ENST00000513957 FSTL1Q12841 308 aa10.2□□□□□ -0.78
NEDD4-210ENST00000513957 PDE3AQ14432 1141 aa10.2□□□□□ -0.78
NEDD4-210ENST00000513957 ITPRIPQ8IWB1 547 aa10.2□□□□□ -0.78
NEDD4-210ENST00000513957 MYO3BQ8WXR4 1341 aa10.2□□□□□ -0.78
NEDD4-210ENST00000513957 DPF2Q92785 391 aa10.2□□□□□ -0.78
NEDD4-210ENST00000513957 RRAGCQ9HB90 399 aa10.2□□□□□ -0.78
NEDD4-210ENST00000513957 COPRSQ9NQ92 184 aa10.2□□□□□ -0.78
NEDD4-210ENST00000513957 HACL1Q9UJ83 578 aa10.2□□□□□ -0.78
NEDD4-210ENST00000513957 DDX19BQ9UMR2 479 aa10.2□□□□□ -0.78
NEDD4-210ENST00000513957 RIPOR2Q9Y4F9 1068 aa10.2□□□□□ -0.78
NEDD4-210ENST00000513957 YDJCA8MPS7 323 aa10.19□□□□□ -0.78
NEDD4-210ENST00000513957 RFX5P48382 616 aaPredicted RBP10.19□□□□□ -0.78
NEDD4-210ENST00000513957 C1QTNF8P60827 252 aa10.19□□□□□ -0.78
NEDD4-210ENST00000513957 PTPN12Q05209 780 aaKnown RBP10.19□□□□□ -0.78
NEDD4-210ENST00000513957 ZNF804AQ7Z570 1209 aa10.19□□□□□ -0.78
NEDD4-210ENST00000513957 SMC1BQ8NDV3 1235 aa10.19□□□□□ -0.78
NEDD4-210ENST00000513957 DBNDD1Q9H9R9 158 aa10.19□□□□□ -0.78
NEDD4-210ENST00000513957 IRS2Q9Y4H2 1338 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 POTECB2RU33 542 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 EYA2O00167 538 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 RIMBP2O15034 1052 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 ZBTB7BO15156 539 aaPredicted RBP10.18□□□□□ -0.78
NEDD4-210ENST00000513957 SRGAP3O43295 1099 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 PDE8BO95263 885 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 EPHX2P34913 555 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 IL15P40933 162 aaPredicted RBP10.18□□□□□ -0.78
NEDD4-210ENST00000513957 SCNN1DP51172 638 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 MVPQ14764 893 aaKnown RBP10.18□□□□□ -0.78
NEDD4-210ENST00000513957 METTL24Q5JXM2 366 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 USP50Q70EL3 339 aaPredicted RBP10.18□□□□□ -0.78
NEDD4-210ENST00000513957 LDHDQ86WU2 507 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 VGLL2Q8N8G2 317 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 AGBL3Q8NEM8 1001 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 ZNF594Q96JF6 807 aaPredicted RBP10.18□□□□□ -0.78
NEDD4-210ENST00000513957 TAF1DQ9H5J8 278 aaPredicted RBP10.18□□□□□ -0.78
NEDD4-210ENST00000513957 GPRC5DQ9NZD1 345 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 GJA3Q9Y6H8 435 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 TRPM7Q96QT4 1865 aa10.18□□□□□ -0.78
NEDD4-210ENST00000513957 USP17L3A6NCW0 530 aa10.17□□□□□ -0.78
NEDD4-210ENST00000513957 USP17L4A6NCW7 530 aa10.17□□□□□ -0.78
NEDD4-210ENST00000513957 PSMD14O00487 310 aa10.17□□□□□ -0.78
NEDD4-210ENST00000513957 VIL1P09327 827 aaKnown RBP10.17□□□□□ -0.78
NEDD4-210ENST00000513957 RLBP1P12271 317 aa10.17□□□□□ -0.78
NEDD4-210ENST00000513957 PUM3Q15397 648 aaKnown RBP10.17□□□□□ -0.78
NEDD4-210ENST00000513957 STRIP1Q5VSL9 837 aa10.17□□□□□ -0.78
NEDD4-210ENST00000513957 USP17L1Q7RTZ2 530 aa10.17□□□□□ -0.78
NEDD4-210ENST00000513957 SLC24A3Q9HC58 644 aa10.17□□□□□ -0.78
NEDD4-210ENST00000513957 ADARB2Q9NS39 739 aaKnown RBP10.17□□□□□ -0.78
NEDD4-210ENST00000513957 TNNQ9UQP3 1299 aa10.17□□□□□ -0.78
NEDD4-210ENST00000513957 STK24Q9Y6E0 443 aa10.17□□□□□ -0.78
NEDD4-210ENST00000513957 TAF5LO75529 589 aa10.16□□□□□ -0.78
NEDD4-210ENST00000513957 RAD17O75943 681 aa10.16□□□□□ -0.78
NEDD4-210ENST00000513957 IL1R1P14778 569 aa10.16□□□□□ -0.78
NEDD4-210ENST00000513957 FKBP1AP62942 108 aaKnown RBP10.16□□□□□ -0.78
NEDD4-210ENST00000513957 DOK7Q18PE1 504 aa10.16□□□□□ -0.78
NEDD4-210ENST00000513957 CAVIN4Q5BKX8 364 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms