RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 SPATA31A1Q5TZJ5 1347 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 NFAT5O94916 1531 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 NUP188Q5SRE5 1749 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 PEAK1Q9H792 1746 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 KAT6BQ8WYB5 2073 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 RREB1Q92766 1687 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 COL5A2P05997 1499 aaPredicted RBP9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 A6NJY4 79 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 IGFBP4P22692 258 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 CLN3Q13286 438 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 FKBP5Q13451 457 aaPredicted RBP9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 TLR1Q15399 786 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 TBCELQ5QJ74 424 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 KRT27Q7Z3Y8 459 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 NLRP3Q96P20 1036 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 EVC2Q86UK5 1308 aa9.05□□□□□ -0.96
HMGN1P17-201ENST00000513734 CPDO75976 1380 aa9.04□□□□□ -0.96
HMGN1P17-201ENST00000513734 SERPINB4P48594 390 aa9.04□□□□□ -0.96
HMGN1P17-201ENST00000513734 SCHIP1Q9P0W5 487 aaPredicted RBP9.04□□□□□ -0.96
HMGN1P17-201ENST00000513734 USP35Q9P2H5 1018 aa9.04□□□□□ -0.96
HMGN1P17-201ENST00000513734 MTMR7Q9Y216 660 aa9.04□□□□□ -0.96
HMGN1P17-201ENST00000513734 CPSF1Q10570 1443 aaKnown RBP9.04□□□□□ -0.96
HMGN1P17-201ENST00000513734 TONSLQ96HA7 1378 aa9.03□□□□□ -0.96
HMGN1P17-201ENST00000513734 CAPN5O15484 640 aaPredicted RBP9.03□□□□□ -0.96
HMGN1P17-201ENST00000513734 C21orf2O43822 256 aa9.03□□□□□ -0.96
HMGN1P17-201ENST00000513734 PPP1R12BO60237 982 aaPredicted RBP9.03□□□□□ -0.96
HMGN1P17-201ENST00000513734 RGS20O76081 388 aa9.03□□□□□ -0.96
HMGN1P17-201ENST00000513734 GCP02774 474 aa9.03□□□□□ -0.96
HMGN1P17-201ENST00000513734 FOXK2Q01167 660 aa9.03□□□□□ -0.96
HMGN1P17-201ENST00000513734 CENPCQ03188 943 aa9.03□□□□□ -0.96
HMGN1P17-201ENST00000513734 SLC9A9Q8IVB4 645 aa9.03□□□□□ -0.96
HMGN1P17-201ENST00000513734 MEIOBQ8N635 442 aa9.03□□□□□ -0.96
HMGN1P17-201ENST00000513734 MYOM1P52179 1685 aa9.03□□□□□ -0.96
HMGN1P17-201ENST00000513734 ABL1P00519 1130 aa9.02□□□□□ -0.97
HMGN1P17-201ENST00000513734 MTFR1Q15390 333 aa9.02□□□□□ -0.97
HMGN1P17-201ENST00000513734 CAPN12Q6ZSI9 719 aa9.02□□□□□ -0.97
HMGN1P17-201ENST00000513734 VTI1AQ96AJ9 217 aa9.02□□□□□ -0.97
HMGN1P17-201ENST00000513734 CARD11Q9BXL7 1154 aa9.02□□□□□ -0.97
HMGN1P17-201ENST00000513734 SEPT3Q9UH03 358 aa9.02□□□□□ -0.97
HMGN1P17-201ENST00000513734 HRH3Q9Y5N1 445 aa9.02□□□□□ -0.97
HMGN1P17-201ENST00000513734 USP3Q9Y6I4 520 aa9.02□□□□□ -0.97
HMGN1P17-201ENST00000513734 TTC21BQ7Z4L5 1316 aa9.02□□□□□ -0.97
HMGN1P17-201ENST00000513734 SBNO2Q9Y2G9 1366 aa9.01□□□□□ -0.97
HMGN1P17-201ENST00000513734 KIF20BQ96Q89 1820 aa9.01□□□□□ -0.97
HMGN1P17-201ENST00000513734 CDK2AP1O14519 115 aa9.01□□□□□ -0.97
HMGN1P17-201ENST00000513734 SND1Q7KZF4 910 aaKnown RBP eCLIP9.01□□□□□ -0.97
HMGN1P17-201ENST00000513734 NLRP13Q86W25 1043 aa9.01□□□□□ -0.97
HMGN1P17-201ENST00000513734 KTN1Q86UP2 1357 aaKnown RBP9□□□□□ -0.97
HMGN1P17-201ENST00000513734 FAM187AA6NFU0 413 aa9□□□□□ -0.97
HMGN1P17-201ENST00000513734 PTCD1O75127 700 aaKnown RBP9□□□□□ -0.97
HMGN1P17-201ENST00000513734 MFAP1P55081 439 aaKnown RBP9□□□□□ -0.97
HMGN1P17-201ENST00000513734 NAA30Q147X3 362 aaPredicted RBP9□□□□□ -0.97
HMGN1P17-201ENST00000513734 TSEN34Q9BSV6 310 aaKnown RBP9□□□□□ -0.97
HMGN1P17-201ENST00000513734 FHDC1Q9C0D6 1143 aaPredicted RBP9□□□□□ -0.97
HMGN1P17-201ENST00000513734 LRP5O75197 1615 aa9□□□□□ -0.97
HMGN1P17-201ENST00000513734 AATKQ6ZMQ8 1374 aa8.99□□□□□ -0.97
HMGN1P17-201ENST00000513734 UPP2O95045 317 aa8.99□□□□□ -0.97
HMGN1P17-201ENST00000513734 EVA1CP58658 441 aa8.99□□□□□ -0.97
HMGN1P17-201ENST00000513734 NME9Q86XW9 330 aa8.99□□□□□ -0.97
HMGN1P17-201ENST00000513734 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.99□□□□□ -0.97
HMGN1P17-201ENST00000513734 GTF3C2Q8WUA4 911 aaPredicted RBP8.99□□□□□ -0.97
HMGN1P17-201ENST00000513734 INSM2Q96T92 566 aaPredicted RBP8.99□□□□□ -0.97
HMGN1P17-201ENST00000513734 SLC12A5Q9H2X9 1139 aa8.99□□□□□ -0.97
HMGN1P17-201ENST00000513734 ANO2Q9NQ90 1003 aa8.99□□□□□ -0.97
HMGN1P17-201ENST00000513734 IQSEC3Q9UPP2 1182 aaPredicted RBP8.99□□□□□ -0.97
HMGN1P17-201ENST00000513734 SHANK3Q9BYB0 1731 aa8.99□□□□□ -0.97
HMGN1P17-201ENST00000513734 A0A1W2PP64 1363 aa8.99□□□□□ -0.97
HMGN1P17-201ENST00000513734 BRD4O60885 1362 aaPredicted RBP8.99□□□□□ -0.97
HMGN1P17-201ENST00000513734 CRB1P82279 1406 aa8.98□□□□□ -0.97
HMGN1P17-201ENST00000513734 SOWAHDA6NJG2 315 aa8.98□□□□□ -0.97
HMGN1P17-201ENST00000513734 TRIM37O94972 964 aa8.98□□□□□ -0.97
HMGN1P17-201ENST00000513734 PSMA6P60900 246 aaKnown RBP8.98□□□□□ -0.97
HMGN1P17-201ENST00000513734 ZNF211Q13398 564 aaPredicted RBP8.98□□□□□ -0.97
HMGN1P17-201ENST00000513734 LINC00528Q8N1L1 170 aa8.98□□□□□ -0.97
HMGN1P17-201ENST00000513734 TCP11L2Q8N4U5 519 aa8.98□□□□□ -0.97
HMGN1P17-201ENST00000513734 NBPF15Q8N660 670 aa8.98□□□□□ -0.97
HMGN1P17-201ENST00000513734 TESK2Q96S53 571 aa8.98□□□□□ -0.97
HMGN1P17-201ENST00000513734 ZSCAN10Q96SZ4 725 aaPredicted RBP8.98□□□□□ -0.97
HMGN1P17-201ENST00000513734 CHMP3Q9Y3E7 222 aa8.98□□□□□ -0.97
HMGN1P17-201ENST00000513734 RGPD3A6NKT7 1758 aaPredicted RBP8.98□□□□□ -0.97
HMGN1P17-201ENST00000513734 RGPD4Q7Z3J3 1758 aa8.98□□□□□ -0.97
HMGN1P17-201ENST00000513734 DISP2A7MBM2 1401 aa8.97□□□□□ -0.97
HMGN1P17-201ENST00000513734 GTF2E1P29083 439 aaPredicted RBP8.97□□□□□ -0.97
HMGN1P17-201ENST00000513734 SF3B2Q13435 895 aaKnown RBP8.97□□□□□ -0.97
HMGN1P17-201ENST00000513734 SLC27A3Q5K4L6 730 aa8.97□□□□□ -0.97
HMGN1P17-201ENST00000513734 TMEM214Q6NUQ4 689 aaKnown RBP8.97□□□□□ -0.97
HMGN1P17-201ENST00000513734 PTF1AQ7RTS3 328 aa8.97□□□□□ -0.97
HMGN1P17-201ENST00000513734 ARHGEF25Q86VW2 580 aa8.97□□□□□ -0.97
HMGN1P17-201ENST00000513734 COL26A1Q96A83 441 aa8.97□□□□□ -0.97
HMGN1P17-201ENST00000513734 C2orf49Q9BVC5 232 aaPredicted RBP8.97□□□□□ -0.97
HMGN1P17-201ENST00000513734 POLMQ9NP87 494 aaPredicted RBP8.97□□□□□ -0.97
HMGN1P17-201ENST00000513734 ABCC6O95255 1503 aa8.96□□□□□ -0.97
HMGN1P17-201ENST00000513734 ST20-MTHFSA0A0A6YYL1 179 aa8.96□□□□□ -0.98
HMGN1P17-201ENST00000513734 SPINT1O43278 529 aa8.96□□□□□ -0.98
HMGN1P17-201ENST00000513734 BMP2P12643 396 aa8.96□□□□□ -0.98
HMGN1P17-201ENST00000513734 EZH2Q15910 746 aaKnown RBP8.96□□□□□ -0.98
HMGN1P17-201ENST00000513734 CCDC27Q2M243 656 aa8.96□□□□□ -0.98
HMGN1P17-201ENST00000513734 C6orf118Q5T5N4 469 aa8.96□□□□□ -0.98
HMGN1P17-201ENST00000513734 STAG2Q8N3U4 1231 aa8.96□□□□□ -0.98
HMGN1P17-201ENST00000513734 TMC1Q8TDI8 760 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms