RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 SASH1O94885 1247 aa14.23□□□□□ -0.13
DDX41-216ENST00000513562 PCCAP05165 728 aaPredicted RBP14.23□□□□□ -0.13
DDX41-216ENST00000513562 MMP14P50281 582 aa14.23□□□□□ -0.13
DDX41-216ENST00000513562 FXR1P51114 621 aaKnown RBP eCLIP14.23□□□□□ -0.13
DDX41-216ENST00000513562 ANKRD18AQ8IVF6 992 aa14.23□□□□□ -0.13
DDX41-216ENST00000513562 CCDC85AQ96PX6 553 aaPredicted RBP14.23□□□□□ -0.13
DDX41-216ENST00000513562 MANSC4A6NHS7 340 aaPredicted RBP14.22□□□□□ -0.13
DDX41-216ENST00000513562 WTIPA6NIX2 430 aaPredicted RBP14.22□□□□□ -0.13
DDX41-216ENST00000513562 INHBEP58166 350 aa14.22□□□□□ -0.13
DDX41-216ENST00000513562 GOLGA2Q08379 1002 aa14.22□□□□□ -0.13
DDX41-216ENST00000513562 PRKG1Q13976 671 aa14.22□□□□□ -0.13
DDX41-216ENST00000513562 STRIP1Q5VSL9 837 aa14.22□□□□□ -0.13
DDX41-216ENST00000513562 RIC3Q7Z5B4 369 aa14.22□□□□□ -0.13
DDX41-216ENST00000513562 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
DDX41-216ENST00000513562 APOBEC3FQ8IUX4 373 aaKnown RBP14.22□□□□□ -0.13
DDX41-216ENST00000513562 CCDC191Q8NCU4 936 aa14.22□□□□□ -0.13
DDX41-216ENST00000513562 TRIM35Q9UPQ4 493 aa14.22□□□□□ -0.13
DDX41-216ENST00000513562 LAS1LQ9Y4W2 734 aaKnown RBP14.22□□□□□ -0.13
DDX41-216ENST00000513562 COL1A1P02452 1464 aaPredicted RBP14.21□□□□□ -0.13
DDX41-216ENST00000513562 ARMC5Q96C12 935 aa14.21□□□□□ -0.13
DDX41-216ENST00000513562 ZBED3Q96IU2 234 aaPredicted RBP14.21□□□□□ -0.13
DDX41-216ENST00000513562 MYD88Q99836 296 aa14.21□□□□□ -0.13
DDX41-216ENST00000513562 ANGEL1Q9UNK9 670 aaKnown RBP14.21□□□□□ -0.13
DDX41-216ENST00000513562 IGF2BP3O00425 579 aaKnown RBP eCLIP14.2□□□□□ -0.14
DDX41-216ENST00000513562 ZBTB48P10074 688 aaPredicted RBP14.2□□□□□ -0.14
DDX41-216ENST00000513562 NEUROD2Q15784 382 aa14.2□□□□□ -0.14
DDX41-216ENST00000513562 MAP3K11Q16584 847 aa14.2□□□□□ -0.14
DDX41-216ENST00000513562 DUSP27Q5VZP5 1158 aa14.2□□□□□ -0.14
DDX41-216ENST00000513562 CDC5LQ99459 802 aaKnown RBP14.2□□□□□ -0.14
DDX41-216ENST00000513562 COA1Q9GZY4 146 aa14.2□□□□□ -0.14
DDX41-216ENST00000513562 CWC25Q9NXE8 425 aaPredicted RBP14.2□□□□□ -0.14
DDX41-216ENST00000513562 PTPN22Q9Y2R2 807 aa14.2□□□□□ -0.14
DDX41-216ENST00000513562 CTSWP56202 376 aa14.19□□□□□ -0.14
DDX41-216ENST00000513562 JARID2Q92833 1246 aaPredicted RBP14.19□□□□□ -0.14
DDX41-216ENST00000513562 FBXW7Q969H0 707 aa14.19□□□□□ -0.14
DDX41-216ENST00000513562 ERO1AQ96HE7 468 aa14.19□□□□□ -0.14
DDX41-216ENST00000513562 WNK4Q96J92 1243 aa14.19□□□□□ -0.14
DDX41-216ENST00000513562 PHAXQ9H814 394 aaKnown RBP14.19□□□□□ -0.14
DDX41-216ENST00000513562 BSDC1Q9NW68 430 aaPredicted RBP14.19□□□□□ -0.14
DDX41-216ENST00000513562 MINPP1Q9UNW1 487 aa14.19□□□□□ -0.14
DDX41-216ENST00000513562 FZD1Q9UP38 647 aa14.19□□□□□ -0.14
DDX41-216ENST00000513562 SSC5DA1L4H1 1573 aa14.18□□□□□ -0.14
DDX41-216ENST00000513562 EN2P19622 333 aaPredicted RBP14.18□□□□□ -0.14
DDX41-216ENST00000513562 CCT4P50991 539 aaKnown RBP14.18□□□□□ -0.14
DDX41-216ENST00000513562 CCDC146Q8IYE0 955 aa14.18□□□□□ -0.14
DDX41-216ENST00000513562 SLC10A4Q96EP9 437 aa14.18□□□□□ -0.14
DDX41-216ENST00000513562 DEFB129Q9H1M3 183 aa14.18□□□□□ -0.14
DDX41-216ENST00000513562 ZNF646O15015 1829 aaPredicted RBP14.18□□□□□ -0.14
DDX41-216ENST00000513562 UNCXA6NJT0 531 aa14.17□□□□□ -0.14
DDX41-216ENST00000513562 CRHR2Q13324 411 aa14.17□□□□□ -0.14
DDX41-216ENST00000513562 TTLL5Q6EMB2 1281 aa14.17□□□□□ -0.14
DDX41-216ENST00000513562 TXNRD3Q86VQ6 643 aa14.17□□□□□ -0.14
DDX41-216ENST00000513562 KIAA0825Q8IV33 1275 aa14.17□□□□□ -0.14
DDX41-216ENST00000513562 CD99L2Q8TCZ2 262 aa14.17□□□□□ -0.14
DDX41-216ENST00000513562 CLMNQ96JQ2 1002 aa14.17□□□□□ -0.14
DDX41-216ENST00000513562 TTLL11Q8NHH1 800 aa14.16□□□□□ -0.14
DDX41-216ENST00000513562 METTL22Q9BUU2 404 aaPredicted RBP14.16□□□□□ -0.14
DDX41-216ENST00000513562 GREM2Q9H772 168 aa14.16□□□□□ -0.14
DDX41-216ENST00000513562 EFCC1Q9HA90 598 aa14.16□□□□□ -0.14
DDX41-216ENST00000513562 MBIPQ9NS73 344 aa14.16□□□□□ -0.14
DDX41-216ENST00000513562 LEMD3Q9Y2U8 911 aa14.16□□□□□ -0.14
DDX41-216ENST00000513562 PPP2R3BQ9Y5P8 575 aa14.16□□□□□ -0.14
DDX41-216ENST00000513562 RBBP6Q7Z6E9 1792 aaKnown RBP14.16□□□□□ -0.14
DDX41-216ENST00000513562 PPP1R12BO60237 982 aaPredicted RBP14.15□□□□□ -0.14
DDX41-216ENST00000513562 KLRK1P26718 216 aa14.15□□□□□ -0.14
DDX41-216ENST00000513562 CAP1Q01518 475 aa14.15□□□□□ -0.14
DDX41-216ENST00000513562 RUNDC1Q96C34 613 aa14.15□□□□□ -0.14
DDX41-216ENST00000513562 ZNF333Q96JL9 665 aa14.15□□□□□ -0.14
DDX41-216ENST00000513562 COLQQ9Y215 455 aaPredicted RBP14.15□□□□□ -0.14
DDX41-216ENST00000513562 TESPA1A2RU30 521 aaPredicted RBP14.14□□□□□ -0.15
DDX41-216ENST00000513562 ZNF853P0CG23 659 aa14.14□□□□□ -0.15
DDX41-216ENST00000513562 GJA5P36382 358 aa14.14□□□□□ -0.15
DDX41-216ENST00000513562 SP3Q02447 781 aa14.14□□□□□ -0.15
DDX41-216ENST00000513562 OTUD7BQ6GQQ9 843 aa14.14□□□□□ -0.15
DDX41-216ENST00000513562 MTMR14Q8NCE2 650 aa14.14□□□□□ -0.15
DDX41-216ENST00000513562 SZT2Q5T011 3432 aa14.14□□□□□ -0.15
DDX41-216ENST00000513562 ZNF804BA4D1E1 1349 aa14.14□□□□□ -0.15
DDX41-216ENST00000513562 DDX58O95786 925 aaKnown RBP14.13□□□□□ -0.15
DDX41-216ENST00000513562 GTF2IP78347 998 aa14.13□□□□□ -0.15
DDX41-216ENST00000513562 RALBP1Q15311 655 aa14.13□□□□□ -0.15
DDX41-216ENST00000513562 DLGAP5Q15398 846 aa14.13□□□□□ -0.15
DDX41-216ENST00000513562 PTPN18Q99952 460 aa14.13□□□□□ -0.15
DDX41-216ENST00000513562 TMEM106CQ9BVX2 250 aa14.13□□□□□ -0.15
DDX41-216ENST00000513562 LAMB1P07942 1786 aa14.12□□□□□ -0.15
DDX41-216ENST00000513562 IGKV5-2P06315 115 aa14.12□□□□□ -0.15
DDX41-216ENST00000513562 SUPT20HL1Q3ZLR7 823 aa14.12□□□□□ -0.15
DDX41-216ENST00000513562 CERS5Q8N5B7 392 aa14.12□□□□□ -0.15
DDX41-216ENST00000513562 ANKRD2Q9GZV1 360 aa14.12□□□□□ -0.15
DDX41-216ENST00000513562 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.12□□□□□ -0.15
DDX41-216ENST00000513562 MAP3K2Q9Y2U5 619 aa14.12□□□□□ -0.15
DDX41-216ENST00000513562 IGHMBP2P38935 993 aaKnown RBP14.11□□□□□ -0.15
DDX41-216ENST00000513562 IREB2P48200 963 aaKnown RBP14.11□□□□□ -0.15
DDX41-216ENST00000513562 CD209Q9NNX6 404 aa14.11□□□□□ -0.15
DDX41-216ENST00000513562 PCDHAC2Q9Y5I4 1007 aa14.11□□□□□ -0.15
DDX41-216ENST00000513562 CLRN2A0PK11 232 aa14.1□□□□□ -0.15
DDX41-216ENST00000513562 SPDYE2BA6NHP3 402 aa14.1□□□□□ -0.15
DDX41-216ENST00000513562 ELL2O00472 640 aaPredicted RBP14.1□□□□□ -0.15
DDX41-216ENST00000513562 MYO1BO43795 1136 aa14.1□□□□□ -0.15
DDX41-216ENST00000513562 SPDYE6P0CI01 402 aa14.1□□□□□ -0.15
DDX41-216ENST00000513562 SLC9C1Q4G0N8 1177 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms