RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 MAP3K2Q9Y2U5 619 aa12.47□□□□□ -0.41
TCOF1-212ENST00000513538 UBE2Q2LH0YL09 131 aa12.46□□□□□ -0.41
TCOF1-212ENST00000513538 DACT2Q5SW24 774 aa12.46□□□□□ -0.41
TCOF1-212ENST00000513538 PODNQ7Z5L7 613 aa12.46□□□□□ -0.41
TCOF1-212ENST00000513538 TXNRD3Q86VQ6 643 aa12.46□□□□□ -0.41
TCOF1-212ENST00000513538 TTLL11Q8NHH1 800 aa12.46□□□□□ -0.41
TCOF1-212ENST00000513538 PRKRIP1Q9H875 184 aaPredicted RBP12.46□□□□□ -0.41
TCOF1-212ENST00000513538 MINPP1Q9UNW1 487 aa12.46□□□□□ -0.41
TCOF1-212ENST00000513538 HSP90B1P14625 803 aaKnown RBP12.45□□□□□ -0.42
TCOF1-212ENST00000513538 KLRK1P26718 216 aa12.45□□□□□ -0.42
TCOF1-212ENST00000513538 FKBP1BP68106 108 aa12.45□□□□□ -0.42
TCOF1-212ENST00000513538 CTU1Q7Z7A3 348 aaKnown RBP12.45□□□□□ -0.42
TCOF1-212ENST00000513538 CNKSR2Q8WXI2 1034 aa12.45□□□□□ -0.42
TCOF1-212ENST00000513538 WNT10BO00744 389 aa12.44□□□□□ -0.42
TCOF1-212ENST00000513538 SASH1O94885 1247 aa12.44□□□□□ -0.42
TCOF1-212ENST00000513538 CWF19L2Q2TBE0 894 aaKnown RBP12.44□□□□□ -0.42
TCOF1-212ENST00000513538 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-212ENST00000513538 LAMB1P07942 1786 aa12.43□□□□□ -0.42
TCOF1-212ENST00000513538 PI4KAP2A4QPH2 592 aa12.43□□□□□ -0.42
TCOF1-212ENST00000513538 NEURL1BA8MQ27 555 aa12.43□□□□□ -0.42
TCOF1-212ENST00000513538 TBC1D8O95759 1140 aa12.43□□□□□ -0.42
TCOF1-212ENST00000513538 DDX58O95786 925 aaKnown RBP12.43□□□□□ -0.42
TCOF1-212ENST00000513538 CCT4P50991 539 aaKnown RBP12.43□□□□□ -0.42
TCOF1-212ENST00000513538 CCDC30Q5VVM6 783 aa12.43□□□□□ -0.42
TCOF1-212ENST00000513538 KSR2Q6VAB6 950 aa12.43□□□□□ -0.42
TCOF1-212ENST00000513538 G2E3Q7L622 706 aa12.43□□□□□ -0.42
TCOF1-212ENST00000513538 PI4KAP1Q8N8J0 262 aa12.43□□□□□ -0.42
TCOF1-212ENST00000513538 TSR2Q969E8 191 aaKnown RBP12.43□□□□□ -0.42
TCOF1-212ENST00000513538 CDC5LQ99459 802 aaKnown RBP12.43□□□□□ -0.42
TCOF1-212ENST00000513538 HPS5Q9UPZ3 1129 aa12.43□□□□□ -0.42
TCOF1-212ENST00000513538 ECM29Q5VYK3 1845 aa12.43□□□□□ -0.42
TCOF1-212ENST00000513538 CASP7P55210 303 aa12.42□□□□□ -0.42
TCOF1-212ENST00000513538 CALD1Q05682 793 aaKnown RBP12.42□□□□□ -0.42
TCOF1-212ENST00000513538 MKRN3Q13064 507 aaKnown RBP12.42□□□□□ -0.42
TCOF1-212ENST00000513538 UBE3BQ7Z3V4 1068 aa12.42□□□□□ -0.42
TCOF1-212ENST00000513538 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-212ENST00000513538 ZNF296Q8WUU4 475 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-212ENST00000513538 FBXW7Q969H0 707 aa12.42□□□□□ -0.42
TCOF1-212ENST00000513538 ZBED3Q96IU2 234 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-212ENST00000513538 R3HDMLQ9H3Y0 253 aa12.42□□□□□ -0.42
TCOF1-212ENST00000513538 SSC5DA1L4H1 1573 aa12.42□□□□□ -0.42
TCOF1-212ENST00000513538 H7C1W4 665 aa12.41□□□□□ -0.42
TCOF1-212ENST00000513538 PTPN12Q05209 780 aaKnown RBP12.41□□□□□ -0.42
TCOF1-212ENST00000513538 STRIP1Q5VSL9 837 aa12.41□□□□□ -0.42
TCOF1-212ENST00000513538 FZD1Q9UP38 647 aa12.41□□□□□ -0.42
TCOF1-212ENST00000513538 MYO3BQ8WXR4 1341 aa12.4□□□□□ -0.42
TCOF1-212ENST00000513538 IRS2Q9Y4H2 1338 aa12.4□□□□□ -0.42
TCOF1-212ENST00000513538 TM4SF4P48230 202 aa12.4□□□□□ -0.42
TCOF1-212ENST00000513538 TTLL12Q14166 644 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-212ENST00000513538 CCDC184Q52MB2 194 aa12.4□□□□□ -0.42
TCOF1-212ENST00000513538 COA1Q9GZY4 146 aa12.4□□□□□ -0.42
TCOF1-212ENST00000513538 PCDHAC2Q9Y5I4 1007 aa12.4□□□□□ -0.42
TCOF1-212ENST00000513538 ZNF804BA4D1E1 1349 aa12.39□□□□□ -0.43
TCOF1-212ENST00000513538 AOX1Q06278 1338 aa12.39□□□□□ -0.43
TCOF1-212ENST00000513538 GPR25O00155 361 aa12.39□□□□□ -0.43
TCOF1-212ENST00000513538 SNAP23O00161 211 aa12.39□□□□□ -0.43
TCOF1-212ENST00000513538 ITGA6P23229 1130 aa12.39□□□□□ -0.43
TCOF1-212ENST00000513538 PRKG1Q13976 671 aa12.39□□□□□ -0.43
TCOF1-212ENST00000513538 GCKRQ14397 625 aa12.39□□□□□ -0.43
TCOF1-212ENST00000513538 KIAA0825Q8IV33 1275 aa12.39□□□□□ -0.43
TCOF1-212ENST00000513538 CERS5Q8N5B7 392 aa12.39□□□□□ -0.43
TCOF1-212ENST00000513538 PLA2G12BQ9BX93 195 aa12.39□□□□□ -0.43
TCOF1-212ENST00000513538 LEMD3Q9Y2U8 911 aa12.39□□□□□ -0.43
TCOF1-212ENST00000513538 CACNA1FO60840 1977 aa12.39□□□□□ -0.43
TCOF1-212ENST00000513538 OTOFQ9HC10 1997 aa12.38□□□□□ -0.43
TCOF1-212ENST00000513538 GTF2IP78347 998 aa12.38□□□□□ -0.43
TCOF1-212ENST00000513538 NEXNQ0ZGT2 675 aa12.38□□□□□ -0.43
TCOF1-212ENST00000513538 NOM1Q5C9Z4 860 aaKnown RBP12.38□□□□□ -0.43
TCOF1-212ENST00000513538 LDLRAD1Q5T700 205 aa12.38□□□□□ -0.43
TCOF1-212ENST00000513538 TTLL5Q6EMB2 1281 aa12.38□□□□□ -0.43
TCOF1-212ENST00000513538 OGFOD1Q8N543 542 aa12.38□□□□□ -0.43
TCOF1-212ENST00000513538 HDAC9Q9UKV0 1011 aa12.38□□□□□ -0.43
TCOF1-212ENST00000513538 NPM3O75607 178 aaKnown RBP12.37□□□□□ -0.43
TCOF1-212ENST00000513538 CSF1RP07333 972 aa12.37□□□□□ -0.43
TCOF1-212ENST00000513538 IGHMBP2P38935 993 aaKnown RBP12.37□□□□□ -0.43
TCOF1-212ENST00000513538 CHRNDQ07001 517 aa12.37□□□□□ -0.43
TCOF1-212ENST00000513538 TWISTNBQ3B726 338 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-212ENST00000513538 APOBEC3FQ8IUX4 373 aaKnown RBP12.37□□□□□ -0.43
TCOF1-212ENST00000513538 CFHR5Q9BXR6 569 aa12.37□□□□□ -0.43
TCOF1-212ENST00000513538 STK31Q9BXU1 1019 aa12.37□□□□□ -0.43
TCOF1-212ENST00000513538 CD209Q9NNX6 404 aa12.37□□□□□ -0.43
TCOF1-212ENST00000513538 COL1A1P02452 1464 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-212ENST00000513538 SLC4A2P04920 1241 aa12.36□□□□□ -0.43
TCOF1-212ENST00000513538 NF2P35240 595 aa12.36□□□□□ -0.43
TCOF1-212ENST00000513538 FLIIQ13045 1269 aa12.36□□□□□ -0.43
TCOF1-212ENST00000513538 PKN2Q16513 984 aaKnown RBP12.36□□□□□ -0.43
TCOF1-212ENST00000513538 PRPF38BQ5VTL8 546 aaKnown RBP12.36□□□□□ -0.43
TCOF1-212ENST00000513538 SPRYD7Q5W111 196 aa12.36□□□□□ -0.43
TCOF1-212ENST00000513538 FBXO46Q6PJ61 603 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-212ENST00000513538 WWC1Q8IX03 1113 aa12.36□□□□□ -0.43
TCOF1-212ENST00000513538 CLMNQ96JQ2 1002 aa12.36□□□□□ -0.43
TCOF1-212ENST00000513538 ANKRD2Q9GZV1 360 aa12.36□□□□□ -0.43
TCOF1-212ENST00000513538 ANGEL1Q9UNK9 670 aaKnown RBP12.36□□□□□ -0.43
TCOF1-212ENST00000513538 TAF5LO75529 589 aa12.35□□□□□ -0.43
TCOF1-212ENST00000513538 SREBF2Q12772 1141 aa12.35□□□□□ -0.43
TCOF1-212ENST00000513538 ARMC9Q7Z3E5 817 aa12.35□□□□□ -0.43
TCOF1-212ENST00000513538 HELBQ8NG08 1087 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-212ENST00000513538 MPHOSPH8Q99549 860 aa12.35□□□□□ -0.43
TCOF1-212ENST00000513538 RBBP6Q7Z6E9 1792 aaKnown RBP12.35□□□□□ -0.43
TCOF1-212ENST00000513538 ARAP2Q8WZ64 1704 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms