RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 IGF2BP3O00425 579 aaKnown RBP eCLIP13.68□□□□□ -0.22
CLDND1-227ENST00000513452 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
CLDND1-227ENST00000513452 CCDC152Q4G0S7 254 aa13.68□□□□□ -0.22
CLDND1-227ENST00000513452 LDLRAD1Q5T700 205 aa13.68□□□□□ -0.22
CLDND1-227ENST00000513452 APOBEC3FQ8IUX4 373 aaKnown RBP13.68□□□□□ -0.22
CLDND1-227ENST00000513452 ZBTB38Q8NAP3 1195 aaPredicted RBP13.68□□□□□ -0.22
CLDND1-227ENST00000513452 ARMC5Q96C12 935 aa13.68□□□□□ -0.22
CLDND1-227ENST00000513452 ERO1AQ96HE7 468 aa13.68□□□□□ -0.22
CLDND1-227ENST00000513452 KIAA0100Q14667 2235 aaKnown RBP13.67□□□□□ -0.22
CLDND1-227ENST00000513452 ZNF646O15015 1829 aaPredicted RBP13.67□□□□□ -0.22
CLDND1-227ENST00000513452 HSP90B1P14625 803 aaKnown RBP13.67□□□□□ -0.22
CLDND1-227ENST00000513452 ATP2B4P23634 1241 aa13.67□□□□□ -0.22
CLDND1-227ENST00000513452 LMOD3Q0VAK6 560 aa13.67□□□□□ -0.22
CLDND1-227ENST00000513452 TRIM28Q13263 835 aaKnown RBP13.67□□□□□ -0.22
CLDND1-227ENST00000513452 DACT2Q5SW24 774 aa13.67□□□□□ -0.22
CLDND1-227ENST00000513452 ANKRD18AQ8IVF6 992 aa13.67□□□□□ -0.22
CLDND1-227ENST00000513452 CLMNQ96JQ2 1002 aa13.67□□□□□ -0.22
CLDND1-227ENST00000513452 DBF4Q9UBU7 674 aaPredicted RBP13.67□□□□□ -0.22
CLDND1-227ENST00000513452 LAS1LQ9Y4W2 734 aaKnown RBP13.67□□□□□ -0.22
CLDND1-227ENST00000513452 MED23Q9ULK4 1368 aa13.67□□□□□ -0.22
CLDND1-227ENST00000513452 MYO3BQ8WXR4 1341 aa13.66□□□□□ -0.22
CLDND1-227ENST00000513452 INHBEP58166 350 aa13.66□□□□□ -0.22
CLDND1-227ENST00000513452 CRHR2Q13324 411 aa13.66□□□□□ -0.22
CLDND1-227ENST00000513452 JARID2Q92833 1246 aaPredicted RBP13.66□□□□□ -0.22
CLDND1-227ENST00000513452 SLC10A4Q96EP9 437 aa13.66□□□□□ -0.22
CLDND1-227ENST00000513452 WNK4Q96J92 1243 aa13.66□□□□□ -0.22
CLDND1-227ENST00000513452 TMEM106CQ9BVX2 250 aa13.66□□□□□ -0.22
CLDND1-227ENST00000513452 EFCC1Q9HA90 598 aa13.66□□□□□ -0.22
CLDND1-227ENST00000513452 BRCA2P51587 3418 aa13.66□□□□□ -0.22
CLDND1-227ENST00000513452 SSC5DA1L4H1 1573 aa13.66□□□□□ -0.22
CLDND1-227ENST00000513452 CENPFP49454 3210 aa13.66□□□□□ -0.22
CLDND1-227ENST00000513452 TRIOBPQ9H2D6 2365 aa13.65□□□□□ -0.22
CLDND1-227ENST00000513452 ZBTB48P10074 688 aaPredicted RBP13.65□□□□□ -0.22
CLDND1-227ENST00000513452 TMPOP42166 694 aaKnown RBP13.65□□□□□ -0.22
CLDND1-227ENST00000513452 RIC3Q7Z5B4 369 aa13.65□□□□□ -0.22
CLDND1-227ENST00000513452 HYPKQ9NX55 129 aa13.65□□□□□ -0.22
CLDND1-227ENST00000513452 COL1A1P02452 1464 aaPredicted RBP13.64□□□□□ -0.23
CLDND1-227ENST00000513452 CHL1O00533 1208 aa13.64□□□□□ -0.23
CLDND1-227ENST00000513452 PDE8AO60658 829 aa13.64□□□□□ -0.23
CLDND1-227ENST00000513452 HOXB7P09629 217 aa13.64□□□□□ -0.23
CLDND1-227ENST00000513452 CAP1Q01518 475 aa13.64□□□□□ -0.23
CLDND1-227ENST00000513452 GOLGA2Q08379 1002 aa13.64□□□□□ -0.23
CLDND1-227ENST00000513452 STRIP1Q5VSL9 837 aa13.64□□□□□ -0.23
CLDND1-227ENST00000513452 KIAA0825Q8IV33 1275 aa13.64□□□□□ -0.23
CLDND1-227ENST00000513452 LAMB1P07942 1786 aa13.63□□□□□ -0.23
CLDND1-227ENST00000513452 H0YGN5 161 aa13.63□□□□□ -0.23
CLDND1-227ENST00000513452 PCCAP05165 728 aaPredicted RBP13.63□□□□□ -0.23
CLDND1-227ENST00000513452 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
CLDND1-227ENST00000513452 ZNF333Q96JL9 665 aa13.63□□□□□ -0.23
CLDND1-227ENST00000513452 MYD88Q99836 296 aa13.63□□□□□ -0.23
CLDND1-227ENST00000513452 DEFB129Q9H1M3 183 aa13.63□□□□□ -0.23
CLDND1-227ENST00000513452 CEP290O15078 2479 aa13.63□□□□□ -0.23
CLDND1-227ENST00000513452 SP3Q02447 781 aa13.62□□□□□ -0.23
CLDND1-227ENST00000513452 MAP3K11Q16584 847 aa13.62□□□□□ -0.23
CLDND1-227ENST00000513452 SLC4A8Q2Y0W8 1093 aa13.62□□□□□ -0.23
CLDND1-227ENST00000513452 SLC9C1Q4G0N8 1177 aa13.62□□□□□ -0.23
CLDND1-227ENST00000513452 OTUD7BQ6GQQ9 843 aa13.62□□□□□ -0.23
CLDND1-227ENST00000513452 ZBED3Q96IU2 234 aaPredicted RBP13.62□□□□□ -0.23
CLDND1-227ENST00000513452 CDC5LQ99459 802 aaKnown RBP13.62□□□□□ -0.23
CLDND1-227ENST00000513452 COA1Q9GZY4 146 aa13.62□□□□□ -0.23
CLDND1-227ENST00000513452 SPEF2Q9C093 1822 aa13.62□□□□□ -0.23
CLDND1-227ENST00000513452 PPP1R12BO60237 982 aaPredicted RBP13.61□□□□□ -0.23
CLDND1-227ENST00000513452 MYCP01106 439 aaPredicted RBP13.61□□□□□ -0.23
CLDND1-227ENST00000513452 GJA5P36382 358 aa13.61□□□□□ -0.23
CLDND1-227ENST00000513452 CCT4P50991 539 aaKnown RBP13.61□□□□□ -0.23
CLDND1-227ENST00000513452 CTSWP56202 376 aa13.61□□□□□ -0.23
CLDND1-227ENST00000513452 TTLL5Q6EMB2 1281 aa13.61□□□□□ -0.23
CLDND1-227ENST00000513452 TXNRD3Q86VQ6 643 aa13.61□□□□□ -0.23
CLDND1-227ENST00000513452 CCDC191Q8NCU4 936 aa13.61□□□□□ -0.23
CLDND1-227ENST00000513452 CWC25Q9NXE8 425 aaPredicted RBP13.61□□□□□ -0.23
CLDND1-227ENST00000513452 MINPP1Q9UNW1 487 aa13.61□□□□□ -0.23
CLDND1-227ENST00000513452 PTCH2Q9Y6C5 1203 aa13.61□□□□□ -0.23
CLDND1-227ENST00000513452 MMP14P50281 582 aa13.6□□□□□ -0.23
CLDND1-227ENST00000513452 DLGAP5Q15398 846 aa13.6□□□□□ -0.23
CLDND1-227ENST00000513452 DUSP27Q5VZP5 1158 aa13.6□□□□□ -0.23
CLDND1-227ENST00000513452 CHRDL2Q6WN34 429 aa13.6□□□□□ -0.23
CLDND1-227ENST00000513452 OTUD5Q96G74 571 aa13.6□□□□□ -0.23
CLDND1-227ENST00000513452 PHAXQ9H814 394 aaKnown RBP13.6□□□□□ -0.23
CLDND1-227ENST00000513452 BSDC1Q9NW68 430 aaPredicted RBP13.6□□□□□ -0.23
CLDND1-227ENST00000513452 DLL1O00548 723 aa13.59□□□□□ -0.23
CLDND1-227ENST00000513452 KLRK1P26718 216 aa13.59□□□□□ -0.23
CLDND1-227ENST00000513452 GTF2IP78347 998 aa13.59□□□□□ -0.23
CLDND1-227ENST00000513452 NBPF11Q86T75 865 aa13.59□□□□□ -0.23
CLDND1-227ENST00000513452 CCDC146Q8IYE0 955 aa13.59□□□□□ -0.23
CLDND1-227ENST00000513452 PTPN18Q99952 460 aa13.59□□□□□ -0.23
CLDND1-227ENST00000513452 PPP2R3BQ9Y5P8 575 aa13.59□□□□□ -0.23
CLDND1-227ENST00000513452 SZT2Q5T011 3432 aa13.59□□□□□ -0.23
CLDND1-227ENST00000513452 CLRN2A0PK11 232 aa13.58□□□□□ -0.24
CLDND1-227ENST00000513452 IREB2P48200 963 aaKnown RBP13.58□□□□□ -0.24
CLDND1-227ENST00000513452 GREM2Q9H772 168 aa13.58□□□□□ -0.24
CLDND1-227ENST00000513452 PCDHAC2Q9Y5I4 1007 aa13.58□□□□□ -0.24
CLDND1-227ENST00000513452 ZNF804BA4D1E1 1349 aa13.58□□□□□ -0.24
CLDND1-227ENST00000513452 SUPT20HL1Q3ZLR7 823 aa13.57□□□□□ -0.24
CLDND1-227ENST00000513452 NBPF12Q5TAG4 269 aaPredicted RBP13.57□□□□□ -0.24
CLDND1-227ENST00000513452 VEZTQ9HBM0 779 aa13.57□□□□□ -0.24
CLDND1-227ENST00000513452 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
CLDND1-227ENST00000513452 TRIM35Q9UPQ4 493 aa13.57□□□□□ -0.24
CLDND1-227ENST00000513452 OTOFQ9HC10 1997 aa13.56□□□□□ -0.24
CLDND1-227ENST00000513452 TESPA1A2RU30 521 aaPredicted RBP13.56□□□□□ -0.24
CLDND1-227ENST00000513452 UNCXA6NJT0 531 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms