RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 SSFA2P28290 1259 aa8.58□□□□□ -1.04
SNX25-206ENST00000513433 CD68P34810 354 aaPredicted RBP8.58□□□□□ -1.04
SNX25-206ENST00000513433 WNT8BQ93098 351 aa8.58□□□□□ -1.04
SNX25-206ENST00000513433 CNTN3Q9P232 1028 aa8.58□□□□□ -1.04
SNX25-206ENST00000513433 LINC01387J3KSC0 135 aa8.57□□□□□ -1.04
SNX25-206ENST00000513433 PPP1R15AO75807 674 aaPredicted RBP8.57□□□□□ -1.04
SNX25-206ENST00000513433 UBL7Q96S82 380 aaPredicted RBP8.57□□□□□ -1.04
SNX25-206ENST00000513433 POP1Q99575 1024 aaKnown RBP8.57□□□□□ -1.04
SNX25-206ENST00000513433 NCAPD3P42695 1498 aa8.57□□□□□ -1.04
SNX25-206ENST00000513433 ERCC6Q03468 1493 aa8.57□□□□□ -1.04
SNX25-206ENST00000513433 RSF1Q96T23 1441 aaPredicted RBP8.56□□□□□ -1.04
SNX25-206ENST00000513433 FSCN2O14926 492 aa8.56□□□□□ -1.04
SNX25-206ENST00000513433 PTPRAP18433 802 aa8.56□□□□□ -1.04
SNX25-206ENST00000513433 FSTP19883 344 aa8.56□□□□□ -1.04
SNX25-206ENST00000513433 MZF1P28698 734 aaPredicted RBP8.56□□□□□ -1.04
SNX25-206ENST00000513433 UVSSAQ2YD98 709 aa8.56□□□□□ -1.04
SNX25-206ENST00000513433 NOM1Q5C9Z4 860 aaKnown RBP8.56□□□□□ -1.04
SNX25-206ENST00000513433 ZNF438Q7Z4V0 828 aa8.56□□□□□ -1.04
SNX25-206ENST00000513433 ATCAYQ86WG3 371 aa8.56□□□□□ -1.04
SNX25-206ENST00000513433 GGNBP2Q9H3C7 697 aa8.56□□□□□ -1.04
SNX25-206ENST00000513433 KCNK4Q9NYG8 393 aa8.56□□□□□ -1.04
SNX25-206ENST00000513433 WIZO95785 1651 aa8.56□□□□□ -1.04
SNX25-206ENST00000513433 WISP1O95388 367 aa8.55□□□□□ -1.04
SNX25-206ENST00000513433 PDGFAP04085 211 aa8.55□□□□□ -1.04
SNX25-206ENST00000513433 EPHA1P21709 976 aa8.55□□□□□ -1.04
SNX25-206ENST00000513433 NCAPG2Q86XI2 1143 aa8.55□□□□□ -1.04
SNX25-206ENST00000513433 AGGF1Q8N302 714 aaeCLIP8.55□□□□□ -1.04
SNX25-206ENST00000513433 EDEM1Q92611 657 aa8.55□□□□□ -1.04
SNX25-206ENST00000513433 LACRTQ9GZZ8 138 aa8.55□□□□□ -1.04
SNX25-206ENST00000513433 KIAA1211Q6ZU35 1233 aa8.54□□□□□ -1.04
SNX25-206ENST00000513433 ARMC10Q8N2F6 343 aa8.54□□□□□ -1.04
SNX25-206ENST00000513433 C1orf127Q8N9H9 656 aa8.54□□□□□ -1.04
SNX25-206ENST00000513433 PMEPA1Q969W9 287 aa8.54□□□□□ -1.04
SNX25-206ENST00000513433 FAM46AQ96IP4 442 aaKnown RBP8.54□□□□□ -1.04
SNX25-206ENST00000513433 KRTAP9-2Q9BYQ4 174 aa8.54□□□□□ -1.04
SNX25-206ENST00000513433 CEP41Q9BYV8 373 aa8.54□□□□□ -1.04
SNX25-206ENST00000513433 CHRDQ9H2X0 955 aa8.54□□□□□ -1.04
SNX25-206ENST00000513433 OSGEPQ9NPF4 335 aa8.54□□□□□ -1.04
SNX25-206ENST00000513433 DZANK1Q9NVP4 752 aa8.54□□□□□ -1.04
SNX25-206ENST00000513433 RAXQ9Y2V3 346 aa8.54□□□□□ -1.04
SNX25-206ENST00000513433 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.54□□□□□ -1.04
SNX25-206ENST00000513433 GSC2O15499 205 aa8.53□□□□□ -1.04
SNX25-206ENST00000513433 EIF1AXP47813 144 aaKnown RBP8.53□□□□□ -1.04
SNX25-206ENST00000513433 ALKBH2Q6NS38 261 aa8.53□□□□□ -1.04
SNX25-206ENST00000513433 GTF3C2Q8WUA4 911 aaPredicted RBP8.53□□□□□ -1.04
SNX25-206ENST00000513433 SH2B1Q9NRF2 756 aaPredicted RBP8.53□□□□□ -1.04
SNX25-206ENST00000513433 BAZ1BQ9UIG0 1483 aaKnown RBP8.52□□□□□ -1.05
SNX25-206ENST00000513433 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.52□□□□□ -1.05
SNX25-206ENST00000513433 H3BRJ5 948 aa8.52□□□□□ -1.05
SNX25-206ENST00000513433 ADAM11O75078 769 aa8.52□□□□□ -1.05
SNX25-206ENST00000513433 PCSK2P16519 638 aa8.52□□□□□ -1.05
SNX25-206ENST00000513433 PIP4K2BP78356 416 aa8.52□□□□□ -1.05
SNX25-206ENST00000513433 FAM117BQ6P1L5 589 aa8.52□□□□□ -1.05
SNX25-206ENST00000513433 TXNDC11Q6PKC3 985 aa8.52□□□□□ -1.05
SNX25-206ENST00000513433 NBPF11Q86T75 865 aa8.52□□□□□ -1.05
SNX25-206ENST00000513433 TMEM102Q8N9M5 508 aaPredicted RBP8.52□□□□□ -1.05
SNX25-206ENST00000513433 FOXD4L4Q8WXT5 416 aaPredicted RBP8.52□□□□□ -1.05
SNX25-206ENST00000513433 SEC31BQ9NQW1 1179 aa8.52□□□□□ -1.05
SNX25-206ENST00000513433 ARID3CA6NKF2 412 aa8.51□□□□□ -1.05
SNX25-206ENST00000513433 GLB1P16278 677 aa8.51□□□□□ -1.05
SNX25-206ENST00000513433 CES1P23141 567 aa8.51□□□□□ -1.05
SNX25-206ENST00000513433 MPSTP25325 297 aa8.51□□□□□ -1.05
SNX25-206ENST00000513433 KLHDC7BQ96G42 594 aa8.51□□□□□ -1.05
SNX25-206ENST00000513433 KANSL3Q9P2N6 904 aa8.51□□□□□ -1.05
SNX25-206ENST00000513433 SOX13Q9UN79 622 aa8.51□□□□□ -1.05
SNX25-206ENST00000513433 DNM1Q05193 864 aaKnown RBP8.5□□□□□ -1.05
SNX25-206ENST00000513433 PHLDB3Q6NSJ2 640 aa8.5□□□□□ -1.05
SNX25-206ENST00000513433 ACAD11Q709F0 780 aa8.5□□□□□ -1.05
SNX25-206ENST00000513433 TOP2AP11388 1531 aaKnown RBP8.49□□□□□ -1.05
SNX25-206ENST00000513433 PDE2AO00408 941 aaPredicted RBP8.49□□□□□ -1.05
SNX25-206ENST00000513433 DHX15O43143 795 aaKnown RBP8.49□□□□□ -1.05
SNX25-206ENST00000513433 IGLV1-40P01703 118 aa8.49□□□□□ -1.05
SNX25-206ENST00000513433 CD97P48960 835 aa8.49□□□□□ -1.05
SNX25-206ENST00000513433 CCDC82Q8N4S0 544 aa8.49□□□□□ -1.05
SNX25-206ENST00000513433 CARD10Q9BWT7 1032 aa8.49□□□□□ -1.05
SNX25-206ENST00000513433 MEGF11A6BM72 1044 aa8.48□□□□□ -1.05
SNX25-206ENST00000513433 ACPPP15309 386 aa8.48□□□□□ -1.05
SNX25-206ENST00000513433 EHHADHQ08426 723 aa8.48□□□□□ -1.05
SNX25-206ENST00000513433 DUOXA2Q1HG44 320 aa8.48□□□□□ -1.05
SNX25-206ENST00000513433 NXPE3Q969Y0 559 aa8.48□□□□□ -1.05
SNX25-206ENST00000513433 MYRFLQ96LU7 910 aa8.48□□□□□ -1.05
SNX25-206ENST00000513433 STOML1Q9UBI4 398 aa8.48□□□□□ -1.05
SNX25-206ENST00000513433 GTF3C3Q9Y5Q9 886 aa8.48□□□□□ -1.05
SNX25-206ENST00000513433 KRTAP9-6A0A140TA67 174 aa8.47□□□□□ -1.05
SNX25-206ENST00000513433 KIAA1324LA8MWY0 1029 aaPredicted RBP8.47□□□□□ -1.05
SNX25-206ENST00000513433 TNFRSF21O75509 655 aa8.47□□□□□ -1.05
SNX25-206ENST00000513433 FAM13AO94988 1023 aa8.47□□□□□ -1.05
SNX25-206ENST00000513433 USP5P45974 858 aa8.47□□□□□ -1.05
SNX25-206ENST00000513433 CABP4P57796 275 aa8.47□□□□□ -1.05
SNX25-206ENST00000513433 SF3B2Q13435 895 aaKnown RBP8.47□□□□□ -1.05
SNX25-206ENST00000513433 ANKRD34AQ69YU3 496 aa8.47□□□□□ -1.05
SNX25-206ENST00000513433 POLIQ9UNA4 740 aa8.47□□□□□ -1.05
SNX25-206ENST00000513433 A6NHS1 94 aa8.46□□□□□ -1.06
SNX25-206ENST00000513433 FAM177BA6PVY3 158 aa8.46□□□□□ -1.06
SNX25-206ENST00000513433 DDX3YO15523 660 aaKnown RBP8.46□□□□□ -1.06
SNX25-206ENST00000513433 FZD6O60353 706 aa8.46□□□□□ -1.06
SNX25-206ENST00000513433 UBASH3BQ8TF42 649 aa8.46□□□□□ -1.06
SNX25-206ENST00000513433 HHIPQ96QV1 700 aa8.46□□□□□ -1.06
SNX25-206ENST00000513433 BHLHE41Q9C0J9 482 aaPredicted RBP8.46□□□□□ -1.06
SNX25-206ENST00000513433 SOX17Q9H6I2 414 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms