RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 ZBTB7CA1YPR0 619 aa8.23□□□□□ -1.09
CHD1-210ENST00000513064 PDE2AO00408 941 aaPredicted RBP8.23□□□□□ -1.09
CHD1-210ENST00000513064 DMRTC2Q8IXT2 367 aaPredicted RBP8.23□□□□□ -1.09
CHD1-210ENST00000513064 DTWD1Q8N5C7 304 aa8.23□□□□□ -1.09
CHD1-210ENST00000513064 IL22RA1Q8N6P7 574 aa8.23□□□□□ -1.09
CHD1-210ENST00000513064 TMEM102Q8N9M5 508 aaPredicted RBP8.23□□□□□ -1.09
CHD1-210ENST00000513064 NXPE3Q969Y0 559 aa8.23□□□□□ -1.09
CHD1-210ENST00000513064 DCAF5Q96JK2 942 aa8.23□□□□□ -1.09
CHD1-210ENST00000513064 ADAM19Q9H013 955 aa8.23□□□□□ -1.09
CHD1-210ENST00000513064 LATS2Q9NRM7 1088 aa8.23□□□□□ -1.09
CHD1-210ENST00000513064 A0A1W2PP55 124 aa8.22□□□□□ -1.09
CHD1-210ENST00000513064 TRPA1O75762 1119 aa8.22□□□□□ -1.09
CHD1-210ENST00000513064 FMR1Q06787 632 aaKnown RBP eCLIP8.22□□□□□ -1.09
CHD1-210ENST00000513064 TRIM28Q13263 835 aaKnown RBP8.22□□□□□ -1.09
CHD1-210ENST00000513064 ENOX2Q16206 610 aaKnown RBP8.22□□□□□ -1.09
CHD1-210ENST00000513064 ADAMTSL4Q6UY14 1074 aa8.22□□□□□ -1.09
CHD1-210ENST00000513064 CCDC74AQ96AQ1 378 aa8.22□□□□□ -1.09
CHD1-210ENST00000513064 HHIPQ96QV1 700 aa8.22□□□□□ -1.09
CHD1-210ENST00000513064 BHLHE41Q9C0J9 482 aaPredicted RBP8.22□□□□□ -1.09
CHD1-210ENST00000513064 MUC3BQ9H195 1237 aa8.22□□□□□ -1.09
CHD1-210ENST00000513064 A0A0A0MRY4 1105 aa8.21□□□□□ -1.1
CHD1-210ENST00000513064 GDF11O95390 407 aa8.21□□□□□ -1.1
CHD1-210ENST00000513064 SPATA31C1P0DKV0 1188 aa8.21□□□□□ -1.1
CHD1-210ENST00000513064 PTPRAP18433 802 aa8.21□□□□□ -1.1
CHD1-210ENST00000513064 PRRT3Q5FWE3 981 aa8.21□□□□□ -1.1
CHD1-210ENST00000513064 KIAA0319Q5VV43 1072 aa8.21□□□□□ -1.1
CHD1-210ENST00000513064 DNAJC14Q6Y2X3 702 aaPredicted RBP8.21□□□□□ -1.1
CHD1-210ENST00000513064 TMEM151AQ8N4L1 468 aa8.21□□□□□ -1.1
CHD1-210ENST00000513064 LACRTQ9GZZ8 138 aa8.21□□□□□ -1.1
CHD1-210ENST00000513064 CDC27P30260 824 aa8.2□□□□□ -1.1
CHD1-210ENST00000513064 RAC1P63000 192 aa8.2□□□□□ -1.1
CHD1-210ENST00000513064 CCDC27Q2M243 656 aa8.2□□□□□ -1.1
CHD1-210ENST00000513064 PPME1Q9Y570 386 aa8.2□□□□□ -1.1
CHD1-210ENST00000513064 KRBA1A5PL33 1030 aa8.19□□□□□ -1.1
CHD1-210ENST00000513064 ANKRD33BA6NCL7 494 aa8.19□□□□□ -1.1
CHD1-210ENST00000513064 COL19A1Q14993 1142 aa8.19□□□□□ -1.1
CHD1-210ENST00000513064 CCNJLQ8IV13 435 aa8.19□□□□□ -1.1
CHD1-210ENST00000513064 FMR1NBQ8N0W7 255 aaPredicted RBP8.19□□□□□ -1.1
CHD1-210ENST00000513064 NPHS2Q9NP85 383 aa8.19□□□□□ -1.1
CHD1-210ENST00000513064 SH2B1Q9NRF2 756 aaPredicted RBP8.19□□□□□ -1.1
CHD1-210ENST00000513064 PNMA6FA0A0J9YX94 578 aa8.18□□□□□ -1.1
CHD1-210ENST00000513064 FAM229AH3BQW9 127 aa8.18□□□□□ -1.1
CHD1-210ENST00000513064 DEAF1O75398 565 aaPredicted RBP8.18□□□□□ -1.1
CHD1-210ENST00000513064 ELNP15502 786 aa8.18□□□□□ -1.1
CHD1-210ENST00000513064 FBXO11Q86XK2 927 aa8.18□□□□□ -1.1
CHD1-210ENST00000513064 MAP4K3Q8IVH8 894 aa8.18□□□□□ -1.1
CHD1-210ENST00000513064 EPS8L3Q8TE67 593 aaKnown RBP8.18□□□□□ -1.1
CHD1-210ENST00000513064 BSNDQ8WZ55 320 aa8.18□□□□□ -1.1
CHD1-210ENST00000513064 TCF12Q99081 682 aa8.18□□□□□ -1.1
CHD1-210ENST00000513064 SRA1Q9HD15 236 aaKnown RBP8.18□□□□□ -1.1
CHD1-210ENST00000513064 SOX13Q9UN79 622 aa8.18□□□□□ -1.1
CHD1-210ENST00000513064 P4HBP07237 508 aaKnown RBP8.17□□□□□ -1.1
CHD1-210ENST00000513064 EPHA1P21709 976 aa8.17□□□□□ -1.1
CHD1-210ENST00000513064 MAPK8P45983 427 aa8.17□□□□□ -1.1
CHD1-210ENST00000513064 SETDB1Q15047 1291 aa8.16□□□□□ -1.1
CHD1-210ENST00000513064 FBF1Q8TES7 1133 aa8.16□□□□□ -1.1
CHD1-210ENST00000513064 EHD4Q9H223 541 aa8.16□□□□□ -1.1
CHD1-210ENST00000513064 LIN7BQ9HAP6 207 aa8.16□□□□□ -1.1
CHD1-210ENST00000513064 FAM177BA6PVY3 158 aa8.15□□□□□ -1.1
CHD1-210ENST00000513064 METTL12A8MUP2 240 aa8.15□□□□□ -1.1
CHD1-210ENST00000513064 LINC01387J3KSC0 135 aa8.15□□□□□ -1.1
CHD1-210ENST00000513064 DLL1O00548 723 aa8.15□□□□□ -1.1
CHD1-210ENST00000513064 TM4SF5O14894 197 aa8.15□□□□□ -1.1
CHD1-210ENST00000513064 GRIK4Q16099 956 aa8.15□□□□□ -1.1
CHD1-210ENST00000513064 ALG1LQ6GMV1 187 aa8.15□□□□□ -1.1
CHD1-210ENST00000513064 VN1R5Q7Z5H4 357 aa8.15□□□□□ -1.1
CHD1-210ENST00000513064 NPAS4Q8IUM7 802 aa8.15□□□□□ -1.1
CHD1-210ENST00000513064 NLRP2Q9NX02 1062 aa8.15□□□□□ -1.1
CHD1-210ENST00000513064 H3BRJ5 948 aa8.14□□□□□ -1.11
CHD1-210ENST00000513064 ERCC3P19447 782 aa8.14□□□□□ -1.11
CHD1-210ENST00000513064 GRIA4P48058 902 aa8.14□□□□□ -1.11
CHD1-210ENST00000513064 CABP4P57796 275 aa8.14□□□□□ -1.11
CHD1-210ENST00000513064 TRIM26Q12899 539 aaPredicted RBP8.14□□□□□ -1.11
CHD1-210ENST00000513064 GRM2Q14416 872 aa8.14□□□□□ -1.11
CHD1-210ENST00000513064 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.14□□□□□ -1.11
CHD1-210ENST00000513064 PRPF40BQ6NWY9 871 aaKnown RBP8.14□□□□□ -1.11
CHD1-210ENST00000513064 ASAP3Q8TDY4 903 aa8.14□□□□□ -1.11
CHD1-210ENST00000513064 DCAF11Q8TEB1 546 aa8.14□□□□□ -1.11
CHD1-210ENST00000513064 WNT8BQ93098 351 aa8.14□□□□□ -1.11
CHD1-210ENST00000513064 WWC3Q9ULE0 1092 aa8.14□□□□□ -1.11
CHD1-210ENST00000513064 A0A096LPE4 126 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 A0A1W2PPZ6 126 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 FSCN2O14926 492 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 GADD45BO75293 160 aaPredicted RBP8.13□□□□□ -1.11
CHD1-210ENST00000513064 ITGB2P05107 769 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 SELPP16109 830 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 ATP2B2Q01814 1243 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 SPRED3Q2MJR0 410 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 PLA2G4EQ3MJ16 856 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 TMCO4Q5TGY1 634 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 FAM117BQ6P1L5 589 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 TXNDC11Q6PKC3 985 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 IGF2-ASQ6U949 168 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 PI16Q6UXB8 463 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 CD163Q86VB7 1156 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 GLIS3Q8NEA6 775 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 LENG1Q96BZ8 264 aaPredicted RBP8.13□□□□□ -1.11
CHD1-210ENST00000513064 NACC1Q96RE7 527 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 SETDB2Q96T68 719 aa8.13□□□□□ -1.11
CHD1-210ENST00000513064 TRAK1Q9UPV9 953 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms