RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 LDHAL6AQ6ZMR3 332 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 PAXIP1Q6ZW49 1069 aaPredicted RBP8.19□□□□□ -1.1
KDM3B-208ENST00000512928 SAMD7Q7Z3H4 446 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 HELBQ8NG08 1087 aaPredicted RBP8.19□□□□□ -1.1
KDM3B-208ENST00000512928 TRPM4Q8TD43 1214 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 SUCLG2Q96I99 432 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 ZNF408Q9H9D4 720 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 NOB1Q9ULX3 412 aaKnown RBP8.19□□□□□ -1.1
KDM3B-208ENST00000512928 LEMD3Q9Y2U8 911 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 ZNF804BA4D1E1 1349 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 ZBED9Q6R2W3 1325 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 MED23Q9ULK4 1368 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 THSD7BQ9C0I4 1608 aa8.18□□□□□ -1.1
KDM3B-208ENST00000512928 USP17L3A6NCW0 530 aa8.18□□□□□ -1.1
KDM3B-208ENST00000512928 USP17L4A6NCW7 530 aa8.18□□□□□ -1.1
KDM3B-208ENST00000512928 CT47B1P0C2W7 299 aaPredicted RBP8.18□□□□□ -1.1
KDM3B-208ENST00000512928 RPS12P25398 132 aaKnown RBP8.18□□□□□ -1.1
KDM3B-208ENST00000512928 KLRK1P26718 216 aa8.18□□□□□ -1.1
KDM3B-208ENST00000512928 USP17L1Q7RTZ2 530 aa8.18□□□□□ -1.1
KDM3B-208ENST00000512928 FRAT1Q92837 279 aaPredicted RBP8.18□□□□□ -1.1
KDM3B-208ENST00000512928 GLIS2Q9BZE0 524 aaPredicted RBP8.18□□□□□ -1.1
KDM3B-208ENST00000512928 BICC1Q9H694 974 aaKnown RBP8.18□□□□□ -1.1
KDM3B-208ENST00000512928 TRPM7Q96QT4 1865 aa8.17□□□□□ -1.1
KDM3B-208ENST00000512928 SNAP23O00161 211 aa8.17□□□□□ -1.1
KDM3B-208ENST00000512928 HSPA8P11142 646 aaKnown RBP8.17□□□□□ -1.1
KDM3B-208ENST00000512928 KIF4BQ2VIQ3 1234 aa8.17□□□□□ -1.1
KDM3B-208ENST00000512928 RSBN1LQ6PCB5 846 aaPredicted RBP8.17□□□□□ -1.1
KDM3B-208ENST00000512928 PODNQ7Z5L7 613 aa8.17□□□□□ -1.1
KDM3B-208ENST00000512928 DPF2Q92785 391 aa8.17□□□□□ -1.1
KDM3B-208ENST00000512928 MXD3Q9BW11 206 aa8.17□□□□□ -1.1
KDM3B-208ENST00000512928 API5Q9BZZ5 524 aaKnown RBP8.17□□□□□ -1.1
KDM3B-208ENST00000512928 COA1Q9GZY4 146 aa8.17□□□□□ -1.1
KDM3B-208ENST00000512928 KIF16BQ96L93 1317 aa8.17□□□□□ -1.1
KDM3B-208ENST00000512928 AOC2O75106 756 aa8.16□□□□□ -1.1
KDM3B-208ENST00000512928 CELF2O95319 508 aaKnown RBP8.16□□□□□ -1.1
KDM3B-208ENST00000512928 EGFRP00533 1210 aa8.16□□□□□ -1.1
KDM3B-208ENST00000512928 VIL1P09327 827 aaKnown RBP8.16□□□□□ -1.1
KDM3B-208ENST00000512928 USP17L8P0C7I0 530 aa8.16□□□□□ -1.1
KDM3B-208ENST00000512928 UBTFL1P0CB47 393 aaPredicted RBP8.16□□□□□ -1.1
KDM3B-208ENST00000512928 RARSP54136 660 aaKnown RBP8.16□□□□□ -1.1
KDM3B-208ENST00000512928 HIRAP54198 1017 aaPredicted RBP8.16□□□□□ -1.1
KDM3B-208ENST00000512928 CYP4F22Q6NT55 531 aa8.16□□□□□ -1.1
KDM3B-208ENST00000512928 ZNF804AQ7Z570 1209 aa8.16□□□□□ -1.1
KDM3B-208ENST00000512928 USP48Q86UV5 1035 aa8.16□□□□□ -1.1
KDM3B-208ENST00000512928 TXNRD3Q86VQ6 643 aa8.16□□□□□ -1.1
KDM3B-208ENST00000512928 OGFOD1Q8N543 542 aa8.16□□□□□ -1.1
KDM3B-208ENST00000512928 DCPSQ96C86 337 aaKnown RBP8.16□□□□□ -1.1
KDM3B-208ENST00000512928 WBP1LQ9NX94 342 aa8.16□□□□□ -1.1
KDM3B-208ENST00000512928 SCN9AQ15858 1988 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 CASP8AP2Q9UKL3 1982 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 UTYO14607 1347 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 ADM5C9JUS6 153 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 GTF2IP78347 998 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 METTL24Q5JXM2 366 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 TTLL5Q6EMB2 1281 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 CDC37L1Q7L3B6 337 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 KRT26Q7Z3Y9 468 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 KIAA0825Q8IV33 1275 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 SULF1Q8IWU6 871 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 ANKRD44Q8N8A2 993 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 AGBL3Q8NEM8 1001 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 KLHDC4Q8TBB5 520 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 ZC3H15Q8WU90 426 aaKnown RBP8.15□□□□□ -1.1
KDM3B-208ENST00000512928 KAZALD1Q96I82 304 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 PUS3Q9BZE2 481 aaKnown RBP8.15□□□□□ -1.1
KDM3B-208ENST00000512928 USP44Q9H0E7 712 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 MYOZ2Q9NPC6 264 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 GGA3Q9NZ52 723 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 JAG2Q9Y219 1238 aa8.15□□□□□ -1.1
KDM3B-208ENST00000512928 ASTN2O75129 1339 aaPredicted RBP8.14□□□□□ -1.11
KDM3B-208ENST00000512928 MROH5Q6ZUA9 1318 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 MYO3BQ8WXR4 1341 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 F8W031 263 aaPredicted RBP8.14□□□□□ -1.11
KDM3B-208ENST00000512928 IPO8O15397 1037 aaKnown RBP8.14□□□□□ -1.11
KDM3B-208ENST00000512928 BCAR3O75815 825 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 SCARF1Q14162 830 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 DEFB115Q30KQ5 88 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 LRRC24Q50LG9 513 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 DACT2Q5SW24 774 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 STRIP1Q5VSL9 837 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 ANGEL2Q5VTE6 544 aaKnown RBP8.14□□□□□ -1.11
KDM3B-208ENST00000512928 CST9Q5W186 159 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 VPS37DQ86XT2 251 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 CLUAP1Q96AJ1 413 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 ABHD8Q96I13 439 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 ZIC5Q96T25 663 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 SIL1Q9H173 461 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 CD209Q9NNX6 404 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 HDAC9Q9UKV0 1011 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 LRRFIP2Q9Y608 721 aaKnown RBP8.14□□□□□ -1.11
KDM3B-208ENST00000512928 U3KPZ7 1027 aaPredicted RBP8.14□□□□□ -1.11
KDM3B-208ENST00000512928 A0A1B0GUL6 1792 aa8.14□□□□□ -1.11
KDM3B-208ENST00000512928 WDR33Q9C0J8 1336 aaKnown RBP8.13□□□□□ -1.11
KDM3B-208ENST00000512928 RASSF10A6NK89 507 aa8.13□□□□□ -1.11
KDM3B-208ENST00000512928 FRAT2O75474 233 aaPredicted RBP8.13□□□□□ -1.11
KDM3B-208ENST00000512928 SASH1O94885 1247 aa8.13□□□□□ -1.11
KDM3B-208ENST00000512928 GYG1P46976 350 aa8.13□□□□□ -1.11
KDM3B-208ENST00000512928 CTCFP49711 727 aaPredicted RBP8.13□□□□□ -1.11
KDM3B-208ENST00000512928 ZNF280AP59817 542 aaPredicted RBP8.13□□□□□ -1.11
KDM3B-208ENST00000512928 RABL6Q3YEC7 729 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms